RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 BUB3O43684 328 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 IGHV1-69P01742 117 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 MIAQ16674 131 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 ADAMTSL4-AS1Q5T5F5 129 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 MRPL53Q96EL3 112 aaKnown RBP6.43□□□□□ -1.38
LSM5-208ENST00000450169 JPT2Q9H910 190 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 DYNLRB1Q9NP97 96 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 CACNA1GO43497 2377 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 IGHV4OR15-8A0A075B7B6 117 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 A0A087WW49 117 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 TRAV13-1A0A0B4J241 112 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 IGHV3-66A0A0C4DH42 116 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 MBD3L5A6NJ08 208 aaPredicted RBP6.43□□□□□ -1.38
LSM5-208ENST00000450169 TMEM178BH3BS89 294 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 NBR2O15453 112 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 IGHV3-30-3P0DP02 117 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 CCL17Q92583 94 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 OPRPNQ99935 248 aaPredicted RBP6.43□□□□□ -1.38
LSM5-208ENST00000450169 UPK3BQ9BT76 320 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 ZFHX2Q9C0A1 2572 aaPredicted RBP6.43□□□□□ -1.38
LSM5-208ENST00000450169 MUC6Q6W4X9 2439 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 BSNQ9UPA5 3926 aa6.43□□□□□ -1.38
LSM5-208ENST00000450169 KALRNO60229 2985 aa6.42□□□□□ -1.38
LSM5-208ENST00000450169 NPC2P61916 151 aa6.42□□□□□ -1.38
LSM5-208ENST00000450169 DAZ2Q13117 558 aaKnown RBP6.42□□□□□ -1.38
LSM5-208ENST00000450169 DAZ4Q86SG3 579 aaKnown RBP6.42□□□□□ -1.38
LSM5-208ENST00000450169 SERP2Q8N6R1 65 aa6.42□□□□□ -1.38
LSM5-208ENST00000450169 DAND5Q8N907 189 aa6.42□□□□□ -1.38
LSM5-208ENST00000450169 DAZ1Q9NQZ3 744 aaKnown RBP6.42□□□□□ -1.38
LSM5-208ENST00000450169 DAZ3Q9NR90 486 aaKnown RBP6.42□□□□□ -1.38
LSM5-208ENST00000450169 PYGO1Q9Y3Y4 419 aa6.42□□□□□ -1.38
LSM5-208ENST00000450169 AKAP13Q12802 2813 aa6.42□□□□□ -1.38
LSM5-208ENST00000450169 COX7A1P24310 79 aa6.42□□□□□ -1.38
LSM5-208ENST00000450169 NSUN5P1Q3KNT7 163 aa6.42□□□□□ -1.38
LSM5-208ENST00000450169 MGAQ8IWI9 3026 aa6.42□□□□□ -1.38
LSM5-208ENST00000450169 CEP250Q9BV73 2442 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 TRAV12-3A0A0B4J271 114 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 TRAV21A0A0B4J279 112 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 A0A0J9YXV3 536 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 IGF1P05019 195 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 MED14OSP0DP75 135 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 KLRB1Q12918 225 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 PLCE1Q9P212 2302 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 GVINP1Q7Z2Y8 2422 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 IGHV3OR16-13A0A075B7E8 117 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 IGHV3-74A0A0B4J1X5 117 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 TRBV27A0A0K0K1C4 114 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 GYPEP15421 78 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 TIRAPP58753 221 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 LINC00315P59091 139 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 SUMO4Q6EEV6 95 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 PRO0628Q9UI54 55 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 LENEPQ9Y5L5 61 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 KIF25-AS1Q9Y6Z4 181 aa6.41□□□□□ -1.38
LSM5-208ENST00000450169 F8WDY8 70 aa6.4□□□□□ -1.38
LSM5-208ENST00000450169 K7ENP7 123 aa6.4□□□□□ -1.38
LSM5-208ENST00000450169 LINC00477Q96M19 166 aa6.4□□□□□ -1.38
LSM5-208ENST00000450169 NDUFA12Q9UI09 145 aa6.4□□□□□ -1.38
LSM5-208ENST00000450169 SPTBN2O15020 2390 aa6.4□□□□□ -1.38
LSM5-208ENST00000450169 M0R1W7 72 aa6.39□□□□□ -1.39
LSM5-208ENST00000450169 COX7A2LO14548 114 aa6.39□□□□□ -1.39
LSM5-208ENST00000450169 INAFM2P0DMQ5 153 aa6.39□□□□□ -1.39
LSM5-208ENST00000450169 RNASE3P12724 160 aaKnown RBP6.39□□□□□ -1.39
LSM5-208ENST00000450169 ATP1A1-AS1Q5TC04 95 aa6.39□□□□□ -1.39
LSM5-208ENST00000450169 ZFAND2AQ8N6M9 145 aa6.39□□□□□ -1.39
LSM5-208ENST00000450169 KAAG1Q9UBP8 84 aa6.39□□□□□ -1.39
LSM5-208ENST00000450169 SMG1Q96Q15 3661 aaKnown RBP6.39□□□□□ -1.39
LSM5-208ENST00000450169 CUL9Q8IWT3 2517 aa6.39□□□□□ -1.39
LSM5-208ENST00000450169 F5H697 171 aa6.39□□□□□ -1.39
LSM5-208ENST00000450169 LY6LH3BQJ8 138 aa6.39□□□□□ -1.39
LSM5-208ENST00000450169 J3QLI3 93 aa6.39□□□□□ -1.39
LSM5-208ENST00000450169 NXPH4O95158 308 aa6.39□□□□□ -1.39
LSM5-208ENST00000450169 NPBQ8NG41 125 aa6.39□□□□□ -1.39
LSM5-208ENST00000450169 IGHV3OR16-10A0A075B7F0 116 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 GNRH2O43555 120 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 NDPQ00604 133 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 ATMQ13315 3056 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 VMO1Q7Z5L0 202 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 C10orf105Q8TEF2 133 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 DMXL2Q8TDJ6 3036 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 IGHV3-49A0A0A0MS15 119 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 CLPSL1A2RUU4 121 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 RS1O15537 224 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 BAALC-AS2P0C853 105 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 SYNJ2BPP57105 145 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 DEFB124Q8NES8 71 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 NUP37Q8NFH4 326 aa6.38□□□□□ -1.39
LSM5-208ENST00000450169 ARHGAP32A7KAX9 2087 aa6.37□□□□□ -1.39
LSM5-208ENST00000450169 IGLV4-3A0A075B6K6 122 aa6.37□□□□□ -1.39
LSM5-208ENST00000450169 IGHV1-58A0A0C4DH39 117 aa6.37□□□□□ -1.39
LSM5-208ENST00000450169 TRBV6-5A0A0K0K1A5 114 aa6.37□□□□□ -1.39
LSM5-208ENST00000450169 PFN2P35080 140 aa6.37□□□□□ -1.39
LSM5-208ENST00000450169 SEM1Q6ZVN7 128 aa6.37□□□□□ -1.39
LSM5-208ENST00000450169 BEAN1Q3B7T3 259 aa6.37□□□□□ -1.39
LSM5-208ENST00000450169 FAM222AQ5U5X8 452 aa6.37□□□□□ -1.39
LSM5-208ENST00000450169 C22orf24Q9Y442 160 aa6.37□□□□□ -1.39
LSM5-208ENST00000450169 USP17L23D6RBM5 183 aa6.36□□□□□ -1.39
LSM5-208ENST00000450169 RNASE4P34096 147 aaKnown RBP6.36□□□□□ -1.39
LSM5-208ENST00000450169 C20orf203Q8NBC4 194 aa6.36□□□□□ -1.39
LSM5-208ENST00000450169 PIMREGQ9BSJ6 248 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms