RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 IL36BQ9NZH7 164 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 TRAV2A0A0B4J234 112 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 PNRC1Q12796 327 aaPredicted RBP4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 ATXN8Q156A1 80 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 C20orf144Q9BQM9 153 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 ANAPC10Q9UM13 185 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 F2Z2F3 143 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 OR11H7Q8NGC8 314 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 SLC25A2Q9BXI2 301 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 SCRT2Q9NQ03 307 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 PLA2G10O15496 165 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 IGLV1-51P01701 117 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 SFTA3P0C7M3 94 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 CXCL3P19876 107 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 ANKRD39Q53RE8 183 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 TMEM14EPQ6UXP3 125 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 B5MCH6 92 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 Q6Q795 121 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 MRPL36Q9P0J6 103 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 OSTCQ9NRP0 149 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 TMEM213A2RRL7 107 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 HLA-DRB4P13762 266 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 HLA-DRB4X5D2U9 266 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 H3BRN7 92 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 H3BS24 57 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 TAX1BP3O14907 124 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 TMEM263Q8WUH6 116 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 IMMP2LQ96T52 175 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 DSPP15924 2871 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 ETDCA0A1B0GVM5 59 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 TRIAP1O43715 76 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 TCRAP04437 139 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 CENPWQ5EE01 88 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 H3BUT2 72 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 I3L2K1 104 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 LINC00614P0C842 121 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 MPLKIPQ8TAP9 179 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 CHD9Q3L8U1 2897 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 CHD7Q9P2D1 2997 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 A0A1B0GUT8 65 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 TEX22C9J3V5 150 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 IGLV1-40P01703 118 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 MRPL53Q96EL3 112 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 MSRB1Q9NZV6 116 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 Q6ZRM9 215 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 Q6ZTC4 211 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 ERG28Q9UKR5 140 aa4.24□□□□□ -1.73
CDC42BPA-209ENST00000448940 SCGB3A1Q96QR1 104 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 TRBV19A0A075B6N1 114 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 LEPROTL1O95214 131 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 IGKV1-17P01599 117 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 GFI1BQ5VTD9 330 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 LINC00322Q6ZN03 302 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 Q6ZSN1 163 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 Q8N6K4 173 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 LINC00587B1AMM8 73 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 VCYO14598 125 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 ARMS2P0C7Q2 107 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 MAPKAPK5-AS1Q8N8E1 139 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 SDHCQ99643 169 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 LENEPQ9Y5L5 61 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 VSIG2Q96IQ7 327 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 CCDC140Q96MF4 163 aa4.23□□□□□ -1.73
CDC42BPA-209ENST00000448940 A0A0G2JRQ6 117 aa4.22□□□□□ -1.73
CDC42BPA-209ENST00000448940 ZNF345Q14585 488 aa4.22□□□□□ -1.73
CDC42BPA-209ENST00000448940 K7EQG2 157 aa4.22□□□□□ -1.73
CDC42BPA-209ENST00000448940 ZNF580Q9UK33 172 aa4.22□□□□□ -1.73
CDC42BPA-209ENST00000448940 NDUFS5O43920 106 aa4.22□□□□□ -1.73
CDC42BPA-209ENST00000448940 RNF126Q9BV68 326 aa4.22□□□□□ -1.73
CDC42BPA-209ENST00000448940 A8MWP6 167 aa4.22□□□□□ -1.73
CDC42BPA-209ENST00000448940 IFITM1P13164 125 aa4.22□□□□□ -1.73
CDC42BPA-209ENST00000448940 A0A0J9YX75 114 aa4.22□□□□□ -1.73
CDC42BPA-209ENST00000448940 CTAG1AP78358 180 aa4.22□□□□□ -1.73
CDC42BPA-209ENST00000448940 COX6B2Q6YFQ2 88 aa4.22□□□□□ -1.73
CDC42BPA-209ENST00000448940 RPP21Q9H633 154 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-209ENST00000448940 GAGE12HA6NDE8 117 aa4.21□□□□□ -1.73
CDC42BPA-209ENST00000448940 NPSP0C0P6 89 aa4.21□□□□□ -1.73
CDC42BPA-209ENST00000448940 UBE2D2P62837 147 aa4.21□□□□□ -1.73
CDC42BPA-209ENST00000448940 C14orf178Q8N769 122 aaPredicted RBP4.21□□□□□ -1.73
CDC42BPA-209ENST00000448940 PRR15LQ9BU68 103 aa4.21□□□□□ -1.73
CDC42BPA-209ENST00000448940 LINC00474Q9P2X8 69 aa4.21□□□□□ -1.73
CDC42BPA-209ENST00000448940 K7EIL1 84 aa4.21□□□□□ -1.74
CDC42BPA-209ENST00000448940 DEFB105AQ8NG35 78 aa4.21□□□□□ -1.74
CDC42BPA-209ENST00000448940 LAMA2P24043 3122 aaKnown RBP4.21□□□□□ -1.74
CDC42BPA-209ENST00000448940 SYS1-DBNDD2H3BUS1 97 aa4.21□□□□□ -1.74
CDC42BPA-209ENST00000448940 TMEM238C9JI98 176 aa4.21□□□□□ -1.74
CDC42BPA-209ENST00000448940 SNAI2O43623 268 aa4.21□□□□□ -1.74
CDC42BPA-209ENST00000448940 PPBPP02775 128 aa4.21□□□□□ -1.74
CDC42BPA-209ENST00000448940 KRTAP21-3Q3LHN1 58 aa4.21□□□□□ -1.74
CDC42BPA-209ENST00000448940 Q8N2B8 174 aa4.21□□□□□ -1.74
CDC42BPA-209ENST00000448940 TMEM242Q9NWH2 141 aa4.21□□□□□ -1.74
CDC42BPA-209ENST00000448940 TMEM14CQ9P0S9 112 aa4.21□□□□□ -1.74
CDC42BPA-209ENST00000448940 USP17L23D6RBM5 183 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 COX7A2LO14548 114 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 HIGD2BQ4VC39 106 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 TEX43Q6ZNM6 134 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 LSM4Q9Y4Z0 139 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 D6R8Y8 96 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 WIPF1O43516 503 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms