RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 EIF5AL1Q6IS14 154 aaKnown RBP4.68□□□□□ -1.66
VPS41-208ENST00000448833 ATRAIDQ6UW56 229 aa4.68□□□□□ -1.66
VPS41-208ENST00000448833 Q6ZSA8 131 aa4.68□□□□□ -1.66
VPS41-208ENST00000448833 BAGE2Q86Y30 109 aa4.68□□□□□ -1.66
VPS41-208ENST00000448833 OR10G8Q8NGN5 311 aa4.68□□□□□ -1.66
VPS41-208ENST00000448833 DEFB104AQ8WTQ1 72 aa4.68□□□□□ -1.66
VPS41-208ENST00000448833 MBD3L1Q8WWY6 194 aa4.68□□□□□ -1.66
VPS41-208ENST00000448833 C1orf43Q9BWL3 253 aa4.68□□□□□ -1.66
VPS41-208ENST00000448833 JPT2Q9H910 190 aa4.68□□□□□ -1.66
VPS41-208ENST00000448833 KLK12Q9UKR0 248 aa4.68□□□□□ -1.66
VPS41-208ENST00000448833 DMBT1Q9UGM3 2413 aaPredicted RBP4.68□□□□□ -1.66
VPS41-208ENST00000448833 TMSB15BA0A087X1C1 80 aa4.67□□□□□ -1.66
VPS41-208ENST00000448833 TRBV6-8A0A0A6YYG3 113 aa4.67□□□□□ -1.66
VPS41-208ENST00000448833 F5H697 171 aa4.67□□□□□ -1.66
VPS41-208ENST00000448833 CRPP02741 224 aa4.67□□□□□ -1.66
VPS41-208ENST00000448833 OR5AL1P0C617 328 aa4.67□□□□□ -1.66
VPS41-208ENST00000448833 TMUB2Q71RG4 321 aa4.67□□□□□ -1.66
VPS41-208ENST00000448833 KCNRGQ8N5I3 272 aa4.67□□□□□ -1.66
VPS41-208ENST00000448833 BAALCQ8WXS3 180 aa4.67□□□□□ -1.66
VPS41-208ENST00000448833 UBE2WQ96B02 151 aa4.67□□□□□ -1.66
VPS41-208ENST00000448833 CYTL1Q9NRR1 136 aa4.67□□□□□ -1.66
VPS41-208ENST00000448833 VPS13BQ7Z7G8 4022 aa4.67□□□□□ -1.66
VPS41-208ENST00000448833 HERC1Q15751 4861 aa4.67□□□□□ -1.66
VPS41-208ENST00000448833 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.66□□□□□ -1.66
VPS41-208ENST00000448833 XKRY2A2RUG3 117 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 H7C1H1 209 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 LECT2O14960 151 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 RAB5CP51148 216 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 RPS20P60866 119 aaKnown RBP4.66□□□□□ -1.66
VPS41-208ENST00000448833 ZNF56Q15929 161 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 MIAQ16674 131 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 DGAT2L7PQ6IED9 249 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 FAM213BQ8TBF2 198 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 DAZAP1Q96EP5 407 aaKnown RBP4.66□□□□□ -1.66
VPS41-208ENST00000448833 SMIM12Q96EX1 92 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 DNAJC30Q96LL9 226 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 CHAC1Q9BUX1 264 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 MLST8Q9BVC4 326 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 MANBALQ9NQG1 85 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 BIN3Q9NQY0 253 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 Q9UF83 564 aa4.66□□□□□ -1.66
VPS41-208ENST00000448833 TRBV25-1A0A075B6N4 114 aa4.65□□□□□ -1.67
VPS41-208ENST00000448833 F2Z2F3 143 aa4.65□□□□□ -1.67
VPS41-208ENST00000448833 SNAI2O43623 268 aa4.65□□□□□ -1.67
VPS41-208ENST00000448833 ANGP03950 147 aaKnown RBP4.65□□□□□ -1.67
VPS41-208ENST00000448833 PRR27Q6MZM9 219 aa4.65□□□□□ -1.67
VPS41-208ENST00000448833 CLRN3Q8NCR9 226 aa4.65□□□□□ -1.67
VPS41-208ENST00000448833 AP1S3Q96PC3 154 aa4.65□□□□□ -1.67
VPS41-208ENST00000448833 CHCHD5Q9BSY4 110 aa4.65□□□□□ -1.67
VPS41-208ENST00000448833 FAM30AQ9NZY2 134 aa4.65□□□□□ -1.67
VPS41-208ENST00000448833 TRAV1-1A0A0B4J248 108 aa4.64□□□□□ -1.67
VPS41-208ENST00000448833 KRTAP29-1A8MX34 341 aaPredicted RBP4.64□□□□□ -1.67
VPS41-208ENST00000448833 G3V3Q6 166 aa4.64□□□□□ -1.67
VPS41-208ENST00000448833 BCL2L11O43521 198 aa4.64□□□□□ -1.67
VPS41-208ENST00000448833 RPL35P42766 123 aaKnown RBP4.64□□□□□ -1.67
VPS41-208ENST00000448833 CACNG7P62955 275 aa4.64□□□□□ -1.67
VPS41-208ENST00000448833 HAMPP81172 84 aa4.64□□□□□ -1.67
VPS41-208ENST00000448833 WFDC2Q14508 124 aa4.64□□□□□ -1.67
VPS41-208ENST00000448833 C15orf54Q8N8G6 183 aa4.64□□□□□ -1.67
VPS41-208ENST00000448833 NEXN-AS1Q8NBZ9 246 aa4.64□□□□□ -1.67
VPS41-208ENST00000448833 OR10AG1Q8NH19 301 aa4.64□□□□□ -1.67
VPS41-208ENST00000448833 VAX2Q9UIW0 290 aa4.64□□□□□ -1.67
VPS41-208ENST00000448833 FAT1Q14517 4588 aa4.64□□□□□ -1.67
VPS41-208ENST00000448833 TRAV8-4A0A0B4J246 113 aa4.63□□□□□ -1.67
VPS41-208ENST00000448833 IGHV1-24A0A0C4DH33 117 aa4.63□□□□□ -1.67
VPS41-208ENST00000448833 PDE6DO43924 150 aa4.63□□□□□ -1.67
VPS41-208ENST00000448833 IFNA1P01562 189 aa4.63□□□□□ -1.67
VPS41-208ENST00000448833 IGLV2-8P01709 118 aa4.63□□□□□ -1.67
VPS41-208ENST00000448833 P01737 135 aa4.63□□□□□ -1.67
VPS41-208ENST00000448833 TRGC1P0CF51 173 aa4.63□□□□□ -1.67
VPS41-208ENST00000448833 GZMBP10144 247 aa4.63□□□□□ -1.67
VPS41-208ENST00000448833 TAGLN2P37802 199 aaKnown RBP4.63□□□□□ -1.67
VPS41-208ENST00000448833 ENHOQ6UWT2 76 aa4.63□□□□□ -1.67
VPS41-208ENST00000448833 C11orf52Q96A22 123 aa4.63□□□□□ -1.67
VPS41-208ENST00000448833 DERL1Q9BUN8 251 aa4.63□□□□□ -1.67
VPS41-208ENST00000448833 FLG2Q5D862 2391 aaPredicted RBP4.63□□□□□ -1.67
VPS41-208ENST00000448833 MYCBP2O75592 4640 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 A0A1B0GV50 99 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 OXTP01178 125 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 GNG4P50150 75 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 CTAG1AP78358 180 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 CCL20P78556 96 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 RPL19P84098 196 aaKnown RBP4.62□□□□□ -1.67
VPS41-208ENST00000448833 MEF2BQ02080 365 aaPredicted RBP4.62□□□□□ -1.67
VPS41-208ENST00000448833 ODF1Q14990 250 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 IQCJQ1A5X6 159 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 MPV17L2Q567V2 206 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 SERTAD4-AS1Q5TG53 156 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 WDR73Q6P4I2 378 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 SCXQ7RTU7 201 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 FER1L6-AS1Q8NA97 138 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 OR2D3Q8NGH3 330 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 PRR34Q9NV39 138 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 GNG13Q9P2W3 67 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 KIF25-AS1Q9Y6Z4 181 aa4.62□□□□□ -1.67
VPS41-208ENST00000448833 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.61□□□□□ -1.67
VPS41-208ENST00000448833 A0A1B0GUV1 79 aa4.61□□□□□ -1.67
VPS41-208ENST00000448833 USP17L23D6RBM5 183 aa4.61□□□□□ -1.67
VPS41-208ENST00000448833 HLA-DQA1P01909 254 aa4.61□□□□□ -1.67
VPS41-208ENST00000448833 S100A6P06703 90 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms