RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 ATP6V1FQ16864 119 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 TMEM97Q5BJF2 176 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 PRR9Q5T870 116 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 MIC13Q5XKP0 118 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 PET117Q6UWS5 81 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 C15orf54Q8N8G6 183 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 MGST2Q99735 147 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 TREM1Q9NP99 234 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 KCNIP2Q9NS61 270 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 PSORS1C2Q9UIG4 136 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 TRAV6A0A075B6T7 132 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 OR7C2O60412 319 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 TYMSP04818 313 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 PYYP10082 97 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 CAV2P51636 162 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 CNBPP62633 177 aaKnown RBP3.62□□□□□ -1.83
USP49-205ENST00000448078 CACNG7P62955 275 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 PRR4Q16378 134 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 IAH1Q2TAA2 248 aaPredicted RBP3.62□□□□□ -1.83
USP49-205ENST00000448078 SPANXN2Q5MJ10 180 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 STX12Q86Y82 276 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 ARL6IP6Q8N6S5 226 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 TMEM75Q8N9X5 138 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 HYLS1Q96M11 299 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 PLAC8Q9NZF1 115 aa3.62□□□□□ -1.83
USP49-205ENST00000448078 TRAV8-4A0A0B4J246 113 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 TRAV34A0A0B4J273 112 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 RPL37AP8A6NKH3 93 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 PANO1I0J062 215 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 P01737 135 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 TCRBP04435 133 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 TAS2R45P59539 299 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 NCS1P62166 190 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 PRR3P79522 188 aaKnown RBP3.61□□□□□ -1.83
USP49-205ENST00000448078 CIRBPQ14011 172 aaKnown RBP3.61□□□□□ -1.83
USP49-205ENST00000448078 MAJINQ3KP22 176 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 TOMM5Q8N4H5 51 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 LYPD6BQ8NI32 183 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 DEDD2Q8WXF8 326 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 FUNDC2Q9BWH2 189 aa3.61□□□□□ -1.83
USP49-205ENST00000448078 SLIRPQ9GZT3 109 aaKnown RBP3.61□□□□□ -1.83
USP49-205ENST00000448078 TRBV10-1A0A0K0K1A3 114 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 SERTM2A0A1B0GWG4 89 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 C7orf66A4D0T2 115 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 A8MU10 97 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 C17orf112F2Z3M2 114 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 CCSO14618 274 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 CST7O76096 145 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 FGF7P21781 194 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 RPS10P46783 165 aaKnown RBP3.6□□□□□ -1.83
USP49-205ENST00000448078 PPP1R1AQ13522 171 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 ZNF506Q5JVG8 444 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 ENHOQ6UWT2 76 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 SPACA4Q8TDM5 124 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 OTORQ9NRC9 128 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 OR5AC2Q9NZP5 309 aa3.6□□□□□ -1.83
USP49-205ENST00000448078 TNXBP22105 4242 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 TRBV7-3A0A075B6L6 115 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 TRBV6-8A0A0A6YYG3 113 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 TRAV1-1A0A0B4J248 108 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 UBE2L5PA0A1B0GUS4 154 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 C9orf170A2RU37 121 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 H3BMQ9 156 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 NDUFS6O75380 124 aaKnown RBP3.59□□□□□ -1.83
USP49-205ENST00000448078 SULT1A1P50225 295 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 CNPY1Q3B7I2 92 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 SMUG1Q53HV7 270 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 SAPCD1Q5SSQ6 148 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 DNAJC30Q96LL9 226 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 SLC25A2Q9BXI2 301 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 SAMD10Q9BYL1 202 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 MIXL1Q9H2W2 232 aa3.59□□□□□ -1.83
USP49-205ENST00000448078 IGLV10-54A0A075B6I4 117 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 IGKV2-24A0A0C4DH68 120 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 CENPXA8MT69 81 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 FAM25EA8MYX2 175 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 UBE2L3P68036 154 aaKnown RBP3.58□□□□□ -1.84
USP49-205ENST00000448078 COX6A2Q02221 97 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 PYDC2Q56P42 97 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 KHDC3LQ587J8 217 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 FAM74A4Q5TZK3 123 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 GOLT1AQ6ZVE7 132 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 MIR17HGQ75NE6 70 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 LINC00269Q8N2A0 174 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 FXYD5Q96DB9 178 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 C9orf85Q96MD7 179 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 MBD2Q9UBB5 411 aa3.58□□□□□ -1.84
USP49-205ENST00000448078 LSM5Q9Y4Y9 91 aaKnown RBP3.58□□□□□ -1.84
USP49-205ENST00000448078 A0A1W2PPV4 95 aa3.57□□□□□ -1.84
USP49-205ENST00000448078 NAP1L6A6NFF2 107 aa3.57□□□□□ -1.84
USP49-205ENST00000448078 FABP5P3A8MUU1 101 aa3.57□□□□□ -1.84
USP49-205ENST00000448078 F6UZH7 168 aa3.57□□□□□ -1.84
USP49-205ENST00000448078 PTTG1O95997 202 aa3.57□□□□□ -1.84
USP49-205ENST00000448078 GCGP01275 180 aa3.57□□□□□ -1.84
USP49-205ENST00000448078 CHTF8P0CG12 524 aa3.57□□□□□ -1.84
USP49-205ENST00000448078 RAB2AP61019 212 aa3.57□□□□□ -1.84
USP49-205ENST00000448078 C14orf178Q8N769 122 aaPredicted RBP3.57□□□□□ -1.84
USP49-205ENST00000448078 DIRC1Q969H9 104 aa3.57□□□□□ -1.84
USP49-205ENST00000448078 PHYHIPLQ96FC7 376 aa3.57□□□□□ -1.84
USP49-205ENST00000448078 BCL7BQ9BQE9 202 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms