RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 TRBV7-1A0A0A6YYK4 115 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 TRAV41A0A0B4J266 112 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 TRAV40A0A0B4J280 105 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 CLPSL1A2RUU4 121 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 OR4C46A6NHA9 309 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 BPY2O14599 106 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 IGHV1-69P01742 117 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 ORM1P02763 201 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 TRGV3P03979 118 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 IGLC3P0DOY3 106 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 ZNF25P17030 456 aaPredicted RBP2.66□□□□□ -1.98
VPS29-202ENST00000447578 IFI27P40305 119 aaPredicted RBP2.66□□□□□ -1.98
VPS29-202ENST00000447578 ZNF80P51504 273 aaPredicted RBP2.66□□□□□ -1.98
VPS29-202ENST00000447578 CD164Q04900 197 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 LOXL1Q08397 574 aaPredicted RBP2.66□□□□□ -1.98
VPS29-202ENST00000447578 LY6EQ16553 131 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 MRPL51Q4U2R6 128 aaKnown RBP2.66□□□□□ -1.98
VPS29-202ENST00000447578 BRD3OSQ6XYD6 125 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 NTM-AS1Q6ZSK4 140 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 AMN1Q8IY45 258 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 RNF182Q8N6D2 247 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 FER1L6-AS1Q8NA97 138 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 LINC00167Q96N53 147 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 SLC50A1Q9BRV3 221 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 TMEM191AQ9H0A3 160 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 LINC00527Q9UJ94 153 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 DOCK11Q5JSL3 2073 aa2.65□□□□□ -1.98
VPS29-202ENST00000447578 A0A0C4DFX4 3053 aa2.65□□□□□ -1.98
VPS29-202ENST00000447578 LAMA1P25391 3075 aa2.65□□□□□ -1.98
VPS29-202ENST00000447578 MYO15AQ9UKN7 3530 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 TRAV8-2A0A0B4J237 113 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 RBAKDNA6NC62 111 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 FAM223BA6NKX1 122 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 FABP5P3A8MUU1 101 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 D6R8Y8 96 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 NCR2O95944 276 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 IGHV3-11P01762 117 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 HINT1P49773 126 aaPredicted RBP2.65□□□□□ -1.99
VPS29-202ENST00000447578 SYCNQ0VAF6 134 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 PMVKQ15126 192 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 KLK9Q2XQG4 91 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 COL5A1-AS1Q5SY13 56 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 FAM104BQ5XKR9 115 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 FAM223AQ8IWN6 122 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 ORMDL3Q8N138 153 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 OR8A1Q8NGG7 326 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 OR10AG1Q8NH19 301 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 C10orf105Q8TEF2 133 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 PRELID3AQ96N28 172 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 PMCHL2Q9BQD1 86 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 AGPAT4-IT1Q9H0P7 198 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 C8orf17Q9NRJ1 99 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 PRO0628Q9UI54 55 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 KLK9Q9UKQ9 250 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 LAMTOR2Q9Y2Q5 125 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 U3KQK5 164 aa2.65□□□□□ -1.99
VPS29-202ENST00000447578 WDFY3Q8IZQ1 3526 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 ATRXP46100 2492 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 USF3Q68DE3 2245 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 TRIOO75962 3097 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 IGLV4-69A0A075B6H9 119 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 IGHV6-1A0A0B4J1U7 121 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 TMEM223A0PJW6 202 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 H3BUX3 64 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 DLEU1O43261 78 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 NPYP01303 97 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 MSMBP08118 114 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 IGLC6P0CF74 106 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 EVI2AP22794 236 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 TSPOP30536 169 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 CKS2P33552 79 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 FXYD7P58549 80 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 HIST1H1AQ02539 215 aaPredicted RBP2.64□□□□□ -1.99
VPS29-202ENST00000447578 TMEM78Q5T7P6 136 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 UNQ9165/PRO28630Q6UXU0 137 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 MAP1LC3AQ9H492 121 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 ST20Q9HBF5 79 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 TP73-AS1Q9UF72 201 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 MRPS16Q9Y3D3 137 aaKnown RBP2.64□□□□□ -1.99
VPS29-202ENST00000447578 CADP27708 2225 aa2.64□□□□□ -1.99
VPS29-202ENST00000447578 DIDO1Q9BTC0 2240 aaKnown RBP2.64□□□□□ -1.99
VPS29-202ENST00000447578 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 IGKV3-7A0A075B6H7 116 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 H3BUA1 57 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 NDUFA4O00483 81 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 TCF21O43680 179 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 HBDP02042 147 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 PPBPP02775 128 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 BLCAPP62952 87 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 LINC01545Q5VT33 79 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 SLC25A34Q6PIV7 304 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 SMIM15Q7Z3B0 74 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 OR4X2Q8NGF9 303 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 IFI27L1Q96BM0 104 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 USMG5Q96IX5 58 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 TMEM208Q9BTX3 173 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 MS4A6AQ9H2W1 248 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 UFC1Q9Y3C8 167 aa2.63□□□□□ -1.99
VPS29-202ENST00000447578 ARFGEF3Q5TH69 2177 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 TRAV21A0A0B4J279 112 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms