RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 CEMP1Q6PRD7 247 aaPredicted RBP6.96□□□□□ -1.3
KLHL3-202ENST00000447439 AKAP9Q99996 3911 aa6.96□□□□□ -1.3
KLHL3-202ENST00000447439 TEX15Q9BXT5 2789 aa6.96□□□□□ -1.3
KLHL3-202ENST00000447439 LINC01619G3V211 115 aa6.95□□□□□ -1.3
KLHL3-202ENST00000447439 DEFB131AP59861 70 aa6.95□□□□□ -1.3
KLHL3-202ENST00000447439 PMVKQ15126 192 aa6.95□□□□□ -1.3
KLHL3-202ENST00000447439 C11orf44Q8N8P7 122 aa6.95□□□□□ -1.3
KLHL3-202ENST00000447439 BBC3Q96PG8 261 aaPredicted RBP6.95□□□□□ -1.3
KLHL3-202ENST00000447439 PGPEP1Q9NXJ5 209 aa6.95□□□□□ -1.3
KLHL3-202ENST00000447439 LINC01549A6NIU2 74 aa6.95□□□□□ -1.3
KLHL3-202ENST00000447439 FOXI2Q6ZQN5 318 aa6.95□□□□□ -1.3
KLHL3-202ENST00000447439 VPREB3Q9UKI3 123 aa6.95□□□□□ -1.3
KLHL3-202ENST00000447439 TLN2Q9Y4G6 2542 aa6.95□□□□□ -1.3
KLHL3-202ENST00000447439 LGALS9O00182 355 aa6.94□□□□□ -1.3
KLHL3-202ENST00000447439 RPL32P62910 135 aaKnown RBP6.94□□□□□ -1.3
KLHL3-202ENST00000447439 RRN3P1Q2M238 152 aa6.94□□□□□ -1.3
KLHL3-202ENST00000447439 MRPL16Q9NX20 251 aaKnown RBP6.94□□□□□ -1.3
KLHL3-202ENST00000447439 RBMY1BA6NDE4 496 aaKnown RBP6.94□□□□□ -1.3
KLHL3-202ENST00000447439 RBMY1EA6NEQ0 496 aaKnown RBP6.94□□□□□ -1.3
KLHL3-202ENST00000447439 RBMY1DP0C7P1 496 aaKnown RBP6.94□□□□□ -1.3
KLHL3-202ENST00000447439 ETDBQ3ZM63 59 aa6.94□□□□□ -1.3
KLHL3-202ENST00000447439 NBPF19A0A087WUL8 3843 aa6.94□□□□□ -1.3
KLHL3-202ENST00000447439 TRBV27A0A0K0K1C4 114 aa6.94□□□□□ -1.3
KLHL3-202ENST00000447439 ADARB2-AS1A8MUL3 147 aa6.94□□□□□ -1.3
KLHL3-202ENST00000447439 INSL3P51460 131 aa6.94□□□□□ -1.3
KLHL3-202ENST00000447439 NAV2Q8IVL1 2488 aa6.93□□□□□ -1.3
KLHL3-202ENST00000447439 LOC107984156A0A0G2JMH3 177 aa6.93□□□□□ -1.3
KLHL3-202ENST00000447439 IGHV4-31P0DP07 118 aa6.93□□□□□ -1.3
KLHL3-202ENST00000447439 ARL17AQ8IVW1 177 aa6.93□□□□□ -1.3
KLHL3-202ENST00000447439 SYT8Q8NBV8 401 aa6.93□□□□□ -1.3
KLHL3-202ENST00000447439 SONP18583 2426 aaKnown RBP6.93□□□□□ -1.3
KLHL3-202ENST00000447439 A0A0J9YXV3 536 aa6.93□□□□□ -1.3
KLHL3-202ENST00000447439 A0A0J9YY99 117 aa6.93□□□□□ -1.3
KLHL3-202ENST00000447439 GATA3P23771 443 aa6.93□□□□□ -1.3
KLHL3-202ENST00000447439 Q6ZSN1 163 aa6.93□□□□□ -1.3
KLHL3-202ENST00000447439 USP24Q9UPU5 2620 aa6.92□□□□□ -1.3
KLHL3-202ENST00000447439 Q6YL49 198 aa6.92□□□□□ -1.3
KLHL3-202ENST00000447439 TMEM61Q8N0U2 210 aa6.92□□□□□ -1.3
KLHL3-202ENST00000447439 ODF3Q96PU9 254 aa6.92□□□□□ -1.3
KLHL3-202ENST00000447439 MYO9AB2RTY4 2548 aa6.92□□□□□ -1.3
KLHL3-202ENST00000447439 IGHV3-38A0A0C4DH36 116 aa6.92□□□□□ -1.3
KLHL3-202ENST00000447439 TSPAN13O95857 204 aa6.92□□□□□ -1.3
KLHL3-202ENST00000447439 SPANXB1Q9NS25 103 aaPredicted RBP6.92□□□□□ -1.3
KLHL3-202ENST00000447439 A0A1W2PRX2 142 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 PSMB2P49721 201 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 DSCR9P59020 149 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 TRPT1Q86TN4 253 aaKnown RBP6.91□□□□□ -1.3
KLHL3-202ENST00000447439 SPAG8Q99932 426 aaPredicted RBP6.91□□□□□ -1.3
KLHL3-202ENST00000447439 EPG5Q9HCE0 2579 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 A8MZ25 164 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 H7C2G1 150 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 J3QQQ9 107 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 HERVK_113P61574 105 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 GAGE13Q4V321 117 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 ZNF418Q8TF45 676 aaPredicted RBP6.91□□□□□ -1.3
KLHL3-202ENST00000447439 TMEM141Q96I45 108 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 UBE2E2Q96LR5 201 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 CLUHP3Q96NS8 147 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 TIMM17AQ99595 171 aa6.91□□□□□ -1.3
KLHL3-202ENST00000447439 IGHV3OR16-12A0A075B7B8 117 aa6.9□□□□□ -1.3
KLHL3-202ENST00000447439 TRBV6-5A0A0K0K1A5 114 aa6.9□□□□□ -1.3
KLHL3-202ENST00000447439 A0A1B0GWB2 263 aa6.9□□□□□ -1.3
KLHL3-202ENST00000447439 TMEM238C9JI98 176 aa6.9□□□□□ -1.3
KLHL3-202ENST00000447439 Q5PR19 223 aa6.9□□□□□ -1.3
KLHL3-202ENST00000447439 HIST2H2BCQ6DN03 193 aa6.9□□□□□ -1.3
KLHL3-202ENST00000447439 DLX4Q92988 240 aaPredicted RBP6.9□□□□□ -1.3
KLHL3-202ENST00000447439 PTH2Q96A98 100 aa6.9□□□□□ -1.3
KLHL3-202ENST00000447439 AMELXQ99217 191 aa6.9□□□□□ -1.3
KLHL3-202ENST00000447439 TSSC4Q9Y5U2 329 aaPredicted RBP6.9□□□□□ -1.3
KLHL3-202ENST00000447439 NIPBLQ6KC79 2804 aaeCLIP6.9□□□□□ -1.3
KLHL3-202ENST00000447439 IGLV4-3A0A075B6K6 122 aa6.9□□□□□ -1.31
KLHL3-202ENST00000447439 TMEM89A2RUT3 159 aa6.9□□□□□ -1.31
KLHL3-202ENST00000447439 I3L3M4 83 aa6.9□□□□□ -1.31
KLHL3-202ENST00000447439 ELANEP08246 267 aa6.9□□□□□ -1.31
KLHL3-202ENST00000447439 CD28P10747 220 aa6.9□□□□□ -1.31
KLHL3-202ENST00000447439 LGALS3P17931 250 aaKnown RBP6.9□□□□□ -1.31
KLHL3-202ENST00000447439 C20orf203Q8NBC4 194 aa6.9□□□□□ -1.31
KLHL3-202ENST00000447439 Q96MF0 132 aa6.9□□□□□ -1.31
KLHL3-202ENST00000447439 SPXQ9BT56 116 aa6.9□□□□□ -1.31
KLHL3-202ENST00000447439 GTSF1LQ9H1H1 148 aa6.9□□□□□ -1.31
KLHL3-202ENST00000447439 PRO0461Q9UI25 63 aa6.9□□□□□ -1.31
KLHL3-202ENST00000447439 PRRC2AP48634 2157 aaKnown RBP6.89□□□□□ -1.31
KLHL3-202ENST00000447439 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.89□□□□□ -1.31
KLHL3-202ENST00000447439 IGKV2-29A2NJV5 120 aaPredicted RBP6.89□□□□□ -1.31
KLHL3-202ENST00000447439 H3BMM0 161 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 PAPPA-AS1Q5QFB9 102 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 RAX2Q96IS3 184 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 NF1P21359 2839 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 CHD6Q8TD26 2715 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 TRAV8-3A0A0A6YYJ7 113 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 TRAV2A0A0B4J234 112 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 IGHV3-30P01768 117 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 CFC1BP0CG36 223 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 CFC1P0CG37 223 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 IGHV3-30-5P0DP03 117 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 ZNF22P17026 224 aaPredicted RBP6.89□□□□□ -1.31
KLHL3-202ENST00000447439 UBE2D1P51668 147 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 NSUN5P1Q3KNT7 163 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 WNK1Q9H4A3 2382 aa6.89□□□□□ -1.31
KLHL3-202ENST00000447439 EIF4EBP3O60516 100 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms