RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-206ENST00000446501 IGHV3-30-5P0DP03 117 aa12.21□□□□□ -0.45
BRF1-206ENST00000446501 HERV-K104P63124 156 aa12.21□□□□□ -0.45
BRF1-206ENST00000446501 PHLDA3Q9Y5J5 127 aa12.21□□□□□ -0.45
BRF1-206ENST00000446501 IGHV3-64A0A075B6Q5 118 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 GAGE12JA6NER3 117 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 RHODO00212 210 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 NDUFA4O00483 81 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 GAGE7O76087 117 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 GAGE12FP0CL80 117 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 GAGE12GP0CL81 117 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 GAGE12IP0CL82 117 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 RPL39P62891 51 aaKnown RBP12.2□□□□□ -0.46
BRF1-206ENST00000446501 GAGE4Q13068 117 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 RHPN1-AS1Q9BWJ2 59 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 TP53TG1Q9Y2A0 90 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 ZNF469Q96JG9 3925 aaPredicted RBP12.2□□□□□ -0.46
BRF1-206ENST00000446501 SORL1Q92673 2214 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 SBSPONQ8IVN8 264 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 MYO9AB2RTY4 2548 aa12.2□□□□□ -0.46
BRF1-206ENST00000446501 B4DSR2 109 aa12.19□□□□□ -0.46
BRF1-206ENST00000446501 DEFB112Q30KQ8 113 aa12.19□□□□□ -0.46
BRF1-206ENST00000446501 C9orf139Q6ZV77 190 aa12.19□□□□□ -0.46
BRF1-206ENST00000446501 DPH3P1Q9H4G8 78 aa12.19□□□□□ -0.46
BRF1-206ENST00000446501 TRBV7-9A0A0J9YWB2 115 aa12.19□□□□□ -0.46
BRF1-206ENST00000446501 A4D1N5 150 aa12.19□□□□□ -0.46
BRF1-206ENST00000446501 ZFAND2AQ8N6M9 145 aa12.19□□□□□ -0.46
BRF1-206ENST00000446501 IGLV4-69A0A075B6H9 119 aa12.18□□□□□ -0.46
BRF1-206ENST00000446501 TRAV2A0A0B4J234 112 aa12.18□□□□□ -0.46
BRF1-206ENST00000446501 RNASE4P34096 147 aaKnown RBP12.18□□□□□ -0.46
BRF1-206ENST00000446501 TEX49A0A1B0GTD5 131 aa12.18□□□□□ -0.46
BRF1-206ENST00000446501 SOCS3O14543 225 aa12.18□□□□□ -0.46
BRF1-206ENST00000446501 IFITM1P13164 125 aa12.18□□□□□ -0.46
BRF1-206ENST00000446501 MRPL53Q96EL3 112 aaKnown RBP12.18□□□□□ -0.46
BRF1-206ENST00000446501 IGHV4-4A0A075B6R2 117 aa12.17□□□□□ -0.46
BRF1-206ENST00000446501 TSHBP01222 138 aa12.17□□□□□ -0.46
BRF1-206ENST00000446501 ELANEP08246 267 aa12.17□□□□□ -0.46
BRF1-206ENST00000446501 Q8N1Y9 231 aa12.17□□□□□ -0.46
BRF1-206ENST00000446501 OR10J6PQ8NGY7 276 aa12.17□□□□□ -0.46
BRF1-206ENST00000446501 CFAP161Q6P656 301 aa12.17□□□□□ -0.46
BRF1-206ENST00000446501 USMG5Q96IX5 58 aa12.17□□□□□ -0.46
BRF1-206ENST00000446501 RNF223E7ERA6 249 aa12.16□□□□□ -0.46
BRF1-206ENST00000446501 GNRH2O43555 120 aa12.16□□□□□ -0.46
BRF1-206ENST00000446501 FAM159AQ6UWV7 190 aa12.16□□□□□ -0.46
BRF1-206ENST00000446501 SLC25A29Q8N8R3 303 aa12.16□□□□□ -0.46
BRF1-206ENST00000446501 IGLV1-40P01703 118 aa12.16□□□□□ -0.46
BRF1-206ENST00000446501 LGALS3P17931 250 aaKnown RBP12.16□□□□□ -0.46
BRF1-206ENST00000446501 C3orf56Q8N813 242 aa12.16□□□□□ -0.46
BRF1-206ENST00000446501 BBC3Q96PG8 261 aaPredicted RBP12.16□□□□□ -0.46
BRF1-206ENST00000446501 UBR5O95071 2799 aaPredicted RBP12.15□□□□□ -0.46
BRF1-206ENST00000446501 NBPF19A0A087WUL8 3843 aa12.15□□□□□ -0.46
BRF1-206ENST00000446501 SONP18583 2426 aaKnown RBP12.15□□□□□ -0.46
BRF1-206ENST00000446501 J3QQQ9 107 aa12.15□□□□□ -0.46
BRF1-206ENST00000446501 ASIPP42127 132 aa12.15□□□□□ -0.46
BRF1-206ENST00000446501 RPL32P62910 135 aaKnown RBP12.15□□□□□ -0.46
BRF1-206ENST00000446501 PMVKQ15126 192 aa12.14□□□□□ -0.47
BRF1-206ENST00000446501 C15orf53Q8NAA6 179 aa12.14□□□□□ -0.47
BRF1-206ENST00000446501 ZNRF2Q8NHG8 242 aa12.14□□□□□ -0.47
BRF1-206ENST00000446501 DAZ1Q9NQZ3 744 aaKnown RBP12.14□□□□□ -0.47
BRF1-206ENST00000446501 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
BRF1-206ENST00000446501 IGKV3-20P01619 116 aa12.14□□□□□ -0.47
BRF1-206ENST00000446501 DUX5Q96PT3 197 aa12.14□□□□□ -0.47
BRF1-206ENST00000446501 TRAV8-4A0A0B4J246 113 aa12.13□□□□□ -0.47
BRF1-206ENST00000446501 F5H697 171 aa12.13□□□□□ -0.47
BRF1-206ENST00000446501 LINC00477Q96M19 166 aa12.13□□□□□ -0.47
BRF1-206ENST00000446501 OPRPNQ99935 248 aaPredicted RBP12.13□□□□□ -0.47
BRF1-206ENST00000446501 NF1P21359 2839 aa12.13□□□□□ -0.47
BRF1-206ENST00000446501 IGHV3-33P01772 117 aa12.13□□□□□ -0.47
BRF1-206ENST00000446501 KRTAP10-9P60411 292 aa12.13□□□□□ -0.47
BRF1-206ENST00000446501 CFHR3Q02985 330 aa12.13□□□□□ -0.47
BRF1-206ENST00000446501 JPT2Q9H910 190 aa12.13□□□□□ -0.47
BRF1-206ENST00000446501 MUSTN1Q8IVN3 82 aa12.12□□□□□ -0.47
BRF1-206ENST00000446501 A0A087WWL8 130 aa12.12□□□□□ -0.47
BRF1-206ENST00000446501 HIST2H2BDQ6DRA6 164 aa12.12□□□□□ -0.47
BRF1-206ENST00000446501 CCDC168Q8NDH2 2452 aa12.12□□□□□ -0.47
BRF1-206ENST00000446501 TRAV21A0A0B4J279 112 aa12.11□□□□□ -0.47
BRF1-206ENST00000446501 H3BUA1 57 aa12.11□□□□□ -0.47
BRF1-206ENST00000446501 OVOL1O14753 267 aa12.11□□□□□ -0.47
BRF1-206ENST00000446501 LINC01620Q4KN68 170 aa12.11□□□□□ -0.47
BRF1-206ENST00000446501 SETD2Q9BYW2 2564 aaPredicted RBP12.11□□□□□ -0.47
BRF1-206ENST00000446501 PAPPA-AS1Q5QFB9 102 aa12.11□□□□□ -0.47
BRF1-206ENST00000446501 IGIPA6NJ69 53 aa12.1□□□□□ -0.47
BRF1-206ENST00000446501 ADARB2-AS1A8MUL3 147 aa12.1□□□□□ -0.47
BRF1-206ENST00000446501 ODF3Q96PU9 254 aa12.1□□□□□ -0.47
BRF1-206ENST00000446501 ZNF256Q9Y2P7 627 aaPredicted RBP12.1□□□□□ -0.47
BRF1-206ENST00000446501 APCP25054 2843 aa12.1□□□□□ -0.47
BRF1-206ENST00000446501 PSMB8P28062 276 aa12.1□□□□□ -0.47
BRF1-206ENST00000446501 LINC01356Q8N9X3 169 aa12.1□□□□□ -0.47
BRF1-206ENST00000446501 TMEM263Q8WUH6 116 aaKnown RBP12.1□□□□□ -0.47
BRF1-206ENST00000446501 ATXN8Q156A1 80 aa12.09□□□□□ -0.47
BRF1-206ENST00000446501 MEIG1Q5JSS6 88 aa12.09□□□□□ -0.47
BRF1-206ENST00000446501 AMELXQ99217 191 aa12.09□□□□□ -0.47
BRF1-206ENST00000446501 PRSS2P07478 247 aa12.08□□□□□ -0.47
BRF1-206ENST00000446501 FAM74A4Q5TZK3 123 aa12.08□□□□□ -0.47
BRF1-206ENST00000446501 A0A096LNT2 108 aa12.08□□□□□ -0.48
BRF1-206ENST00000446501 RNASE3P12724 160 aaKnown RBP12.08□□□□□ -0.48
BRF1-206ENST00000446501 ZNF580Q9UK33 172 aa12.08□□□□□ -0.48
BRF1-206ENST00000446501 LENEPQ9Y5L5 61 aa12.08□□□□□ -0.48
BRF1-206ENST00000446501 TRAV12-2A0A075B6T6 113 aa12.08□□□□□ -0.48
BRF1-206ENST00000446501 TRAV12-3A0A0B4J271 114 aa12.08□□□□□ -0.48
BRF1-206ENST00000446501 SYNJ2BPP57105 145 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms