RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 SMCPP49901 116 aaPredicted RBP5.33□□□□□ -1.56
SF3A3P1-201ENST00000446317 CT83Q5H943 113 aa5.33□□□□□ -1.56
SF3A3P1-201ENST00000446317 AMN1Q8IY45 258 aa5.33□□□□□ -1.56
SF3A3P1-201ENST00000446317 CTDSP1Q9GZU7 261 aa5.33□□□□□ -1.56
SF3A3P1-201ENST00000446317 A0A087WWC5 75 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 DEFB131BA0A096LNP1 70 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 IGLL5B9A064 214 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 RS1O15537 224 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 CRYGDP07320 174 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 SMIM17P0DL12 118 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 NDUFA6P56556 154 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 CACNG7P62955 275 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 RIGQ13278 110 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 KIAA1644Q3SXP7 199 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 OCIAD2Q56VL3 154 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 KCNIP4Q6PIL6 250 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 PHLDA1Q8WV24 401 aaPredicted RBP5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 TGP01266 2768 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 MUC4Q99102 2169 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 TRAV26-1A0A087WT03 109 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 TRAV4A0A0B4J268 109 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 IGHV3-38A0A0C4DH36 116 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 GAGE12JA6NER3 117 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 F2Z2F3 143 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 NXPH4O95158 308 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 NUDT3O95989 172 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 ATP5G1P05496 136 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 MED14OSP0DP75 135 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 GAGE4Q13068 117 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 GAGE5Q13069 117 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 FHL2Q14192 279 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 ELOBQ15370 118 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 RNF151Q2KHN1 245 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 GAGE13Q4V321 117 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 COA6Q5JTJ3 125 aaKnown RBP5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 SUMO4Q6EEV6 95 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 NEGR1Q7Z3B1 354 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 RASL10AQ92737 203 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 RPL39LQ96EH5 51 aaKnown RBP5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 AP1S3Q96PC3 154 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 MIEN1Q9BRT3 115 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 GFRA4Q9GZZ7 299 aa5.32□□□□□ -1.56
SF3A3P1-201ENST00000446317 CCL25O15444 150 aa5.31□□□□□ -1.56
SF3A3P1-201ENST00000446317 HBBP68871 147 aa5.31□□□□□ -1.56
SF3A3P1-201ENST00000446317 LGALS9BQ3B8N2 356 aa5.31□□□□□ -1.56
SF3A3P1-201ENST00000446317 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
SF3A3P1-201ENST00000446317 CDPF1Q6NVV7 123 aa5.31□□□□□ -1.56
SF3A3P1-201ENST00000446317 LINC00612Q8N6U2 182 aa5.31□□□□□ -1.56
SF3A3P1-201ENST00000446317 FRZBQ92765 325 aa5.31□□□□□ -1.56
SF3A3P1-201ENST00000446317 BTF3L4Q96K17 158 aa5.31□□□□□ -1.56
SF3A3P1-201ENST00000446317 HIST1H2BLQ99880 126 aa5.31□□□□□ -1.56
SF3A3P1-201ENST00000446317 KIF25-AS1Q9Y6Z4 181 aa5.31□□□□□ -1.56
SF3A3P1-201ENST00000446317 A0A1B0GXF2 115 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 A8MWV9 139 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 PAX4O43316 350 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 SCGB1D1O95968 90 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 TRGC1P0CF51 173 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 FABP4P15090 132 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 GYPEP15421 78 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 LINC00315P59091 139 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 MRPL51Q4U2R6 128 aaKnown RBP5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 TMEM136Q6ZRR5 245 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 SLC25A29Q8N8R3 303 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 GATD1Q8NB37 220 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 RNF185Q96GF1 192 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 YPEL4Q96NS1 127 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 DPH3P1Q9H4G8 78 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 HHLA3Q9XRX5 114 aa5.3□□□□□ -1.56
SF3A3P1-201ENST00000446317 STARD9Q9P2P6 4700 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 TRAV10A0A0B4J240 114 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 HIST1H2BKO60814 126 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 HIST1H2BJP06899 126 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 HIST1H2BOP23527 126 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 HIST1H2BBP33778 126 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 RPS10P46783 165 aaKnown RBP5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 HIST1H2BDP58876 126 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 HIST1H2BCP62807 126 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 PLECQ15149 4684 aaKnown RBP5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 HIST2H2BEQ16778 126 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 UFSP1Q6NVU6 142 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 HIST1H2BHQ93079 126 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 VSIG2Q96IQ7 327 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 HIST1H2BNQ99877 126 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 HIST1H2BMQ99879 126 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 CST9LQ9H4G1 147 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 SPANXA1Q9NS26 97 aa5.29□□□□□ -1.56
SF3A3P1-201ENST00000446317 DNAH7Q8WXX0 4024 aa5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 DYNC2H1Q8NCM8 4307 aaKnown RBP5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 IGHV4-4A0A075B6R2 117 aa5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 LOC389332A0A1B0GUA5 103 aa5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 FAM231BA6NCW3 169 aa5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 D6R8Y8 96 aa5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 K7EQD1 137 aa5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 APCSP02743 223 aa5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 CRYBA4P53673 196 aa5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 ZNRF2Q8NHG8 242 aa5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 TMEM18Q96B42 140 aa5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 CNFNQ9BYD5 112 aa5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 MRPL18Q9H0U6 180 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms