RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 DMRTA1Q5VZB9 504 aa6.82□□□□□ -1.32
PTPRN-208ENST00000446182 UBE2WQ96B02 151 aa6.82□□□□□ -1.32
PTPRN-208ENST00000446182 BTF3L4Q96K17 158 aa6.82□□□□□ -1.32
PTPRN-208ENST00000446182 CHCHD7Q9BUK0 85 aa6.82□□□□□ -1.32
PTPRN-208ENST00000446182 MAP1LC3BQ9GZQ8 125 aa6.82□□□□□ -1.32
PTPRN-208ENST00000446182 TMEM167BQ9NRX6 74 aa6.82□□□□□ -1.32
PTPRN-208ENST00000446182 PLA2G2DQ9UNK4 145 aa6.82□□□□□ -1.32
PTPRN-208ENST00000446182 TRAV34A0A0B4J273 112 aa6.81□□□□□ -1.32
PTPRN-208ENST00000446182 FABP5P3A8MUU1 101 aa6.81□□□□□ -1.32
PTPRN-208ENST00000446182 H3BVH4 76 aa6.81□□□□□ -1.32
PTPRN-208ENST00000446182 PDE6DO43924 150 aa6.81□□□□□ -1.32
PTPRN-208ENST00000446182 CXorf1O96002 111 aa6.81□□□□□ -1.32
PTPRN-208ENST00000446182 DNLZQ5SXM8 178 aa6.81□□□□□ -1.32
PTPRN-208ENST00000446182 A0A087WX48 190 aa6.8□□□□□ -1.32
PTPRN-208ENST00000446182 MT-ND4LP03901 98 aa6.8□□□□□ -1.32
PTPRN-208ENST00000446182 ARMS2P0C7Q2 107 aa6.8□□□□□ -1.32
PTPRN-208ENST00000446182 MEF2BQ02080 365 aaPredicted RBP6.8□□□□□ -1.32
PTPRN-208ENST00000446182 ELOBQ15370 118 aa6.8□□□□□ -1.32
PTPRN-208ENST00000446182 FAM74A4Q5TZK3 123 aa6.8□□□□□ -1.32
PTPRN-208ENST00000446182 Q86TA4 180 aa6.8□□□□□ -1.32
PTPRN-208ENST00000446182 CTDSP1Q9GZU7 261 aa6.8□□□□□ -1.32
PTPRN-208ENST00000446182 A0A087WWL8 130 aa6.79□□□□□ -1.32
PTPRN-208ENST00000446182 A0A1W2PRE2 83 aa6.79□□□□□ -1.32
PTPRN-208ENST00000446182 FAM74A7A6NL05 159 aa6.79□□□□□ -1.32
PTPRN-208ENST00000446182 PEX7O00628 323 aa6.79□□□□□ -1.32
PTPRN-208ENST00000446182 SRP19P09132 144 aaKnown RBP6.79□□□□□ -1.32
PTPRN-208ENST00000446182 CRIP1P50238 77 aa6.79□□□□□ -1.32
PTPRN-208ENST00000446182 HNRNPA3P51991 378 aaKnown RBP6.79□□□□□ -1.32
PTPRN-208ENST00000446182 RPL37AP61513 92 aaKnown RBP6.79□□□□□ -1.32
PTPRN-208ENST00000446182 Q0VG73 95 aa6.79□□□□□ -1.32
PTPRN-208ENST00000446182 C14orf177Q52M58 125 aa6.79□□□□□ -1.32
PTPRN-208ENST00000446182 SFRP2Q96HF1 295 aa6.79□□□□□ -1.32
PTPRN-208ENST00000446182 TCEAL7Q9BRU2 100 aa6.79□□□□□ -1.32
PTPRN-208ENST00000446182 GNG13Q9P2W3 67 aa6.79□□□□□ -1.32
PTPRN-208ENST00000446182 TRBV10-1A0A0K0K1A3 114 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 A0A1B0GV50 99 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 C7orf77A4D0Y5 90 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 GRIFINA4D1Z8 144 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 M0R036 132 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 SH2D1AO60880 128 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 UBE2D3P61077 147 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 UBE2D2P62837 147 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 KCNIP4Q6PIL6 250 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 ENHOQ6UWT2 76 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 COX8CQ7Z4L0 72 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 DAZAP1Q96EP5 407 aaKnown RBP6.78□□□□□ -1.32
PTPRN-208ENST00000446182 ZC2HC1AQ96GY0 325 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 C1orf43Q9BWL3 253 aa6.78□□□□□ -1.32
PTPRN-208ENST00000446182 M0R381 172 aa6.77□□□□□ -1.33
PTPRN-208ENST00000446182 UBE2G2P60604 165 aa6.77□□□□□ -1.33
PTPRN-208ENST00000446182 RPL36AP83881 106 aaKnown RBP6.77□□□□□ -1.33
PTPRN-208ENST00000446182 RPL36ALQ969Q0 106 aaKnown RBP6.77□□□□□ -1.33
PTPRN-208ENST00000446182 RPS10P5Q9NQ39 176 aa6.77□□□□□ -1.33
PTPRN-208ENST00000446182 NAT8Q9UHE5 227 aa6.77□□□□□ -1.33
PTPRN-208ENST00000446182 TMA7Q9Y2S6 64 aaKnown RBP6.77□□□□□ -1.33
PTPRN-208ENST00000446182 PHLDA3Q9Y5J5 127 aa6.77□□□□□ -1.33
PTPRN-208ENST00000446182 TRBV7-3A0A075B6L6 115 aa6.76□□□□□ -1.33
PTPRN-208ENST00000446182 TRBV6-8A0A0A6YYG3 113 aa6.76□□□□□ -1.33
PTPRN-208ENST00000446182 USP17L23D6RBM5 183 aa6.76□□□□□ -1.33
PTPRN-208ENST00000446182 TMEM262E9PQX1 116 aa6.76□□□□□ -1.33
PTPRN-208ENST00000446182 PPP1R2P9O14990 202 aa6.76□□□□□ -1.33
PTPRN-208ENST00000446182 RAB5BP61020 215 aa6.76□□□□□ -1.33
PTPRN-208ENST00000446182 TMEM241Q24JQ0 296 aa6.76□□□□□ -1.33
PTPRN-208ENST00000446182 LINC01559Q495D7 138 aa6.76□□□□□ -1.33
PTPRN-208ENST00000446182 MPV17L2Q567V2 206 aa6.76□□□□□ -1.33
PTPRN-208ENST00000446182 ZFP82Q8N141 532 aa6.76□□□□□ -1.33
PTPRN-208ENST00000446182 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.76□□□□□ -1.33
PTPRN-208ENST00000446182 OR10G8Q8NGN5 311 aa6.76□□□□□ -1.33
PTPRN-208ENST00000446182 TMSB15BA0A087X1C1 80 aa6.75□□□□□ -1.33
PTPRN-208ENST00000446182 ZNF727A8MUV8 499 aa6.75□□□□□ -1.33
PTPRN-208ENST00000446182 CRPP02741 224 aa6.75□□□□□ -1.33
PTPRN-208ENST00000446182 ZNF674Q2M3X9 581 aa6.75□□□□□ -1.33
PTPRN-208ENST00000446182 FAM162BQ5T6X4 162 aa6.75□□□□□ -1.33
PTPRN-208ENST00000446182 HIST1H2BAQ96A08 127 aa6.75□□□□□ -1.33
PTPRN-208ENST00000446182 ANAPC16Q96DE5 110 aa6.75□□□□□ -1.33
PTPRN-208ENST00000446182 ZFP30Q9Y2G7 519 aa6.75□□□□□ -1.33
PTPRN-208ENST00000446182 C1orf196B1AJZ1 125 aa6.74□□□□□ -1.33
PTPRN-208ENST00000446182 HLA-DQA1P01909 254 aa6.74□□□□□ -1.33
PTPRN-208ENST00000446182 ANGP03950 147 aaKnown RBP6.74□□□□□ -1.33
PTPRN-208ENST00000446182 PRSS1P07477 247 aa6.74□□□□□ -1.33
PTPRN-208ENST00000446182 MT1HL1P0DM35 61 aa6.74□□□□□ -1.33
PTPRN-208ENST00000446182 S100PP25815 95 aa6.74□□□□□ -1.33
PTPRN-208ENST00000446182 RPL19P84098 196 aaKnown RBP6.74□□□□□ -1.33
PTPRN-208ENST00000446182 C9orf163Q8N9P6 203 aa6.74□□□□□ -1.33
PTPRN-208ENST00000446182 NEXN-AS1Q8NBZ9 246 aa6.74□□□□□ -1.33
PTPRN-208ENST00000446182 FMC1Q96HJ9 113 aa6.74□□□□□ -1.33
PTPRN-208ENST00000446182 IMMP2LQ96T52 175 aa6.74□□□□□ -1.33
PTPRN-208ENST00000446182 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.74□□□□□ -1.33
PTPRN-208ENST00000446182 TNXBP22105 4242 aa6.73□□□□□ -1.33
PTPRN-208ENST00000446182 TRBV6-1A0A0K0K1D8 114 aa6.73□□□□□ -1.33
PTPRN-208ENST00000446182 LOC105371267A0A1B0GV96 52 aa6.73□□□□□ -1.33
PTPRN-208ENST00000446182 COLCA2A8K830 154 aa6.73□□□□□ -1.33
PTPRN-208ENST00000446182 PANO1I0J062 215 aa6.73□□□□□ -1.33
PTPRN-208ENST00000446182 RAB4BP61018 213 aa6.73□□□□□ -1.33
PTPRN-208ENST00000446182 MIAQ16674 131 aa6.73□□□□□ -1.33
PTPRN-208ENST00000446182 DGAT2L7PQ6IED9 249 aa6.73□□□□□ -1.33
PTPRN-208ENST00000446182 PRR27Q6MZM9 219 aa6.73□□□□□ -1.33
PTPRN-208ENST00000446182 KRTAP26-1Q6PEX3 210 aa6.73□□□□□ -1.33
PTPRN-208ENST00000446182 CBLN2Q8IUK8 224 aa6.73□□□□□ -1.33
PTPRN-208ENST00000446182 SMIM7Q9BQ49 75 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms