RNA–Protein interactions for RNA: ENST00000443796.5

EPHA4-209, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 584 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-209ENST00000443796 KHDC3LQ587J8 217 aa4.28□□□□□ -1.72
EPHA4-209ENST00000443796 LCN15Q6UWW0 184 aa4.28□□□□□ -1.72
EPHA4-209ENST00000443796 BPIFA4PQ86YQ2 179 aa4.28□□□□□ -1.72
EPHA4-209ENST00000443796 LINC00469Q8N7U9 141 aa4.28□□□□□ -1.72
EPHA4-209ENST00000443796 BLNKQ8WV28 456 aa4.28□□□□□ -1.72
EPHA4-209ENST00000443796 BAALCQ8WXS3 180 aa4.28□□□□□ -1.72
EPHA4-209ENST00000443796 TVP23CQ96ET8 276 aa4.28□□□□□ -1.72
EPHA4-209ENST00000443796 PYGO2Q9BRQ0 406 aa4.28□□□□□ -1.72
EPHA4-209ENST00000443796 SLC50A1Q9BRV3 221 aa4.28□□□□□ -1.72
EPHA4-209ENST00000443796 GGACTQ9BVM4 153 aa4.28□□□□□ -1.72
EPHA4-209ENST00000443796 MRPL32Q9BYC8 188 aaKnown RBP4.28□□□□□ -1.72
EPHA4-209ENST00000443796 CRCT1Q9UGL9 99 aa4.28□□□□□ -1.72
EPHA4-209ENST00000443796 KLF12Q9Y4X4 402 aa4.28□□□□□ -1.72
EPHA4-209ENST00000443796 ZNF727A8MUV8 499 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 B4DEV8 164 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 FNDC10F2Z333 226 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 H3BTX0 84 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 SSSCA1O60232 199 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 COX7A2P2O60397 106 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 NDUFS6O75380 124 aaKnown RBP4.27□□□□□ -1.73
EPHA4-209ENST00000443796 IGHV3-30P01768 117 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 IGHV3-33P01772 117 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 IGHV3-30-3P0DP02 117 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 IGHV3-30-5P0DP03 117 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 TAGLN2P37802 199 aaKnown RBP4.27□□□□□ -1.73
EPHA4-209ENST00000443796 SLC38A11Q08AI6 406 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 PYY3Q5JQD4 70 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 C10orf113Q5VZT2 155 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 CYB561D1Q8N8Q1 229 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 OR5C1Q8NGR4 320 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 MBD3L1Q8WWY6 194 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 ATP5SQ99766 215 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 VGLL1Q99990 258 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 PSMG3Q9BT73 122 aaPredicted RBP4.27□□□□□ -1.73
EPHA4-209ENST00000443796 TMEM242Q9NWH2 141 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 MRPL16Q9NX20 251 aaKnown RBP4.27□□□□□ -1.73
EPHA4-209ENST00000443796 PXMP4Q9Y6I8 212 aa4.27□□□□□ -1.73
EPHA4-209ENST00000443796 LOC100131303A0A0U1RQF7 123 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 HIST1H2BKO60814 126 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 SLC25A5P05141 298 aaKnown RBP4.26□□□□□ -1.73
EPHA4-209ENST00000443796 HIST1H2BJP06899 126 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 HIST1H2BOP23527 126 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 HIST1H2BBP33778 126 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 RNASE4P34096 147 aaKnown RBP4.26□□□□□ -1.73
EPHA4-209ENST00000443796 RPS10P46783 165 aaKnown RBP4.26□□□□□ -1.73
EPHA4-209ENST00000443796 TCL1AP56279 114 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 HIST1H2BDP58876 126 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 RAB2AP61019 212 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 HIST1H2BCP62807 126 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 RAB31Q13636 194 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 LAGE3Q14657 143 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 ZNF726P1Q15940 193 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 HIST2H2BEQ16778 126 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.26□□□□□ -1.73
EPHA4-209ENST00000443796 AKR1C8PQ5T2L2 129 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 TMEM14EPQ6UXP3 125 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 Q6ZRP5 223 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 HIST3H2BBQ8N257 126 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 HIST1H2BHQ93079 126 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 HIST1H2BNQ99877 126 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 HIST1H2BMQ99879 126 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 DPH3P1Q9H4G8 78 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 RPH3ALQ9UNE2 315 aa4.26□□□□□ -1.73
EPHA4-209ENST00000443796 TRBV24-1A0A075B6N3 115 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 TGIF2-C20orf24A0A0A6YYL0 155 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 TRGV4A0A0C4DH28 118 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 A0A0J9YXV3 536 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 A0A1B0GV50 99 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 SLC17A3O00476 420 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 CST7O76096 145 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 IGLC2P0DOY2 106 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 BCL2P10415 239 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 NDUFA6P56556 154 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 ERCC8Q13216 396 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 ZNF674Q2M3X9 581 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 Q8N976 141 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 LINC00477Q96M19 166 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 ODF3Q96PU9 254 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 TXNDC17Q9BRA2 123 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 TP53TG3Q9ULZ0 132 aa4.25□□□□□ -1.73
EPHA4-209ENST00000443796 C7orf71A4D174 169 aa4.24□□□□□ -1.73
EPHA4-209ENST00000443796 PANO1I0J062 215 aa4.24□□□□□ -1.73
EPHA4-209ENST00000443796 MPDU1O75352 247 aa4.24□□□□□ -1.73
EPHA4-209ENST00000443796 ORM1P02763 201 aa4.24□□□□□ -1.73
EPHA4-209ENST00000443796 TRGC2P03986 189 aa4.24□□□□□ -1.73
EPHA4-209ENST00000443796 GPX1P07203 203 aa4.24□□□□□ -1.73
EPHA4-209ENST00000443796 TRGC1P0CF51 173 aa4.24□□□□□ -1.73
EPHA4-209ENST00000443796 SERF2P84101 59 aa4.24□□□□□ -1.73
EPHA4-209ENST00000443796 COA6Q5JTJ3 125 aaKnown RBP4.24□□□□□ -1.73
EPHA4-209ENST00000443796 OR1L4Q8NGR5 311 aa4.24□□□□□ -1.73
EPHA4-209ENST00000443796 MGST2Q99735 147 aa4.24□□□□□ -1.73
EPHA4-209ENST00000443796 AGPAT4-IT1Q9H0P7 198 aa4.24□□□□□ -1.73
EPHA4-209ENST00000443796 TIMM9Q9Y5J7 89 aa4.24□□□□□ -1.73
EPHA4-209ENST00000443796 TRBV19A0A075B6N1 114 aa4.23□□□□□ -1.73
EPHA4-209ENST00000443796 TRAV8-3A0A0A6YYJ7 113 aa4.23□□□□□ -1.73
EPHA4-209ENST00000443796 TRAV8-6A0A0B4J262 113 aa4.23□□□□□ -1.73
EPHA4-209ENST00000443796 C9JCJ5 164 aa4.23□□□□□ -1.73
EPHA4-209ENST00000443796 PPP1R2P9O14990 202 aa4.23□□□□□ -1.73
EPHA4-209ENST00000443796 ZNF253O75346 499 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms