RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 TRAV26-2A0A0B4J265 109 aa8.67□□□□□ -1.02
PDLIM2-212ENST00000443561 IGHV3-38A0A0C4DH36 116 aa8.67□□□□□ -1.02
PDLIM2-212ENST00000443561 SMIM27A0A1W2PRY6 76 aa8.67□□□□□ -1.02
PDLIM2-212ENST00000443561 TNP2Q05952 138 aa8.67□□□□□ -1.02
PDLIM2-212ENST00000443561 C1orf134Q5TEV5 83 aa8.67□□□□□ -1.02
PDLIM2-212ENST00000443561 GATD1Q8NB37 220 aa8.67□□□□□ -1.02
PDLIM2-212ENST00000443561 RNF185Q96GF1 192 aa8.67□□□□□ -1.02
PDLIM2-212ENST00000443561 FAM231BA6NCW3 169 aa8.66□□□□□ -1.02
PDLIM2-212ENST00000443561 TRGC1P0CF51 173 aa8.66□□□□□ -1.02
PDLIM2-212ENST00000443561 TWIST1Q15672 202 aa8.66□□□□□ -1.02
PDLIM2-212ENST00000443561 LINC01556Q5JQF7 62 aa8.66□□□□□ -1.02
PDLIM2-212ENST00000443561 LINC00862A6NCI5 91 aa8.65□□□□□ -1.02
PDLIM2-212ENST00000443561 F5H697 171 aa8.65□□□□□ -1.02
PDLIM2-212ENST00000443561 RPL36AP83881 106 aaKnown RBP8.65□□□□□ -1.02
PDLIM2-212ENST00000443561 TTC32Q5I0X7 151 aa8.65□□□□□ -1.02
PDLIM2-212ENST00000443561 C15orf54Q8N8G6 183 aa8.65□□□□□ -1.02
PDLIM2-212ENST00000443561 RPL36ALQ969Q0 106 aaKnown RBP8.65□□□□□ -1.02
PDLIM2-212ENST00000443561 RPL39LQ96EH5 51 aaKnown RBP8.65□□□□□ -1.02
PDLIM2-212ENST00000443561 A0A1B0GUT8 65 aa8.64□□□□□ -1.03
PDLIM2-212ENST00000443561 PRSS29PA6NIE9 313 aa8.64□□□□□ -1.03
PDLIM2-212ENST00000443561 SMIM17P0DL12 118 aa8.64□□□□□ -1.03
PDLIM2-212ENST00000443561 LINC00336Q6ZUF6 198 aa8.64□□□□□ -1.03
PDLIM2-212ENST00000443561 COMMD7Q86VX2 200 aa8.64□□□□□ -1.03
PDLIM2-212ENST00000443561 DNAJC30Q96LL9 226 aa8.64□□□□□ -1.03
PDLIM2-212ENST00000443561 A0A1B0GXF2 115 aa8.63□□□□□ -1.03
PDLIM2-212ENST00000443561 TMEM218A2RU14 115 aa8.63□□□□□ -1.03
PDLIM2-212ENST00000443561 IGHV3-30P01768 117 aa8.63□□□□□ -1.03
PDLIM2-212ENST00000443561 IGHV3-33P01772 117 aa8.63□□□□□ -1.03
PDLIM2-212ENST00000443561 IGHV3-30-3P0DP02 117 aa8.63□□□□□ -1.03
PDLIM2-212ENST00000443561 IGHV3-30-5P0DP03 117 aa8.63□□□□□ -1.03
PDLIM2-212ENST00000443561 OR10J3Q5JRS4 329 aa8.63□□□□□ -1.03
PDLIM2-212ENST00000443561 RASL11AQ6T310 242 aa8.63□□□□□ -1.03
PDLIM2-212ENST00000443561 UQCC3Q6UW78 93 aa8.63□□□□□ -1.03
PDLIM2-212ENST00000443561 NIT1Q86X76 327 aa8.63□□□□□ -1.03
PDLIM2-212ENST00000443561 DEFB104AQ8WTQ1 72 aa8.63□□□□□ -1.03
PDLIM2-212ENST00000443561 TRBV6-8A0A0A6YYG3 113 aa8.62□□□□□ -1.03
PDLIM2-212ENST00000443561 RPS10P46783 165 aaKnown RBP8.62□□□□□ -1.03
PDLIM2-212ENST00000443561 DAZ4Q86SG3 579 aaKnown RBP8.62□□□□□ -1.03
PDLIM2-212ENST00000443561 AMN1Q8IY45 258 aa8.62□□□□□ -1.03
PDLIM2-212ENST00000443561 TMEM191AQ9H0A3 160 aa8.62□□□□□ -1.03
PDLIM2-212ENST00000443561 DAZ3Q9NR90 486 aaKnown RBP8.62□□□□□ -1.03
PDLIM2-212ENST00000443561 DNAH5Q8TE73 4624 aa8.61□□□□□ -1.03
PDLIM2-212ENST00000443561 TRAV8-6A0A0B4J262 113 aa8.61□□□□□ -1.03
PDLIM2-212ENST00000443561 RAB4AP20338 218 aa8.61□□□□□ -1.03
PDLIM2-212ENST00000443561 NIT2Q9NQR4 276 aa8.61□□□□□ -1.03
PDLIM2-212ENST00000443561 NAT8BQ9UHF3 227 aa8.61□□□□□ -1.03
PDLIM2-212ENST00000443561 A0A087WWC5 75 aa8.6□□□□□ -1.03
PDLIM2-212ENST00000443561 IBA57-AS1B1ANH7 110 aa8.6□□□□□ -1.03
PDLIM2-212ENST00000443561 SMKR1H3BMG3 65 aa8.6□□□□□ -1.03
PDLIM2-212ENST00000443561 PNRC1Q12796 327 aaPredicted RBP8.6□□□□□ -1.03
PDLIM2-212ENST00000443561 C10orf91Q5T1B1 145 aa8.6□□□□□ -1.03
PDLIM2-212ENST00000443561 NCR2O95944 276 aa8.59□□□□□ -1.03
PDLIM2-212ENST00000443561 BTF3P20290 206 aaKnown RBP8.59□□□□□ -1.03
PDLIM2-212ENST00000443561 MPV17L2Q567V2 206 aa8.59□□□□□ -1.03
PDLIM2-212ENST00000443561 MRPL54Q6P161 138 aaKnown RBP8.59□□□□□ -1.03
PDLIM2-212ENST00000443561 NRACQ8N912 160 aa8.59□□□□□ -1.03
PDLIM2-212ENST00000443561 HERC2O95714 4834 aa8.58□□□□□ -1.04
PDLIM2-212ENST00000443561 TRBV6-5A0A0K0K1A5 114 aa8.58□□□□□ -1.04
PDLIM2-212ENST00000443561 H7C1H1 209 aa8.58□□□□□ -1.04
PDLIM2-212ENST00000443561 RIGQ13278 110 aa8.58□□□□□ -1.04
PDLIM2-212ENST00000443561 IQCJQ1A5X6 159 aa8.58□□□□□ -1.04
PDLIM2-212ENST00000443561 F8W036 122 aa8.57□□□□□ -1.04
PDLIM2-212ENST00000443561 K7EP13 123 aa8.57□□□□□ -1.04
PDLIM2-212ENST00000443561 KRTAP10-2P60368 255 aa8.57□□□□□ -1.04
PDLIM2-212ENST00000443561 MRPL51Q4U2R6 128 aaKnown RBP8.57□□□□□ -1.04
PDLIM2-212ENST00000443561 FAM104BQ5XKR9 115 aa8.57□□□□□ -1.04
PDLIM2-212ENST00000443561 MAPKAPK5-AS1Q8N8E1 139 aa8.57□□□□□ -1.04
PDLIM2-212ENST00000443561 SEC11CQ9BY50 192 aa8.57□□□□□ -1.04
PDLIM2-212ENST00000443561 PCLOQ9Y6V0 5065 aa8.57□□□□□ -1.04
PDLIM2-212ENST00000443561 LRP1BQ9NZR2 4599 aa8.56□□□□□ -1.04
PDLIM2-212ENST00000443561 FUSP35637 526 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDLIM2-212ENST00000443561 CAMPP49913 170 aa8.56□□□□□ -1.04
PDLIM2-212ENST00000443561 POLR2KP53803 58 aaKnown RBP8.56□□□□□ -1.04
PDLIM2-212ENST00000443561 WFDC2Q14508 124 aa8.56□□□□□ -1.04
PDLIM2-212ENST00000443561 C10orf126Q8N4M7 172 aa8.56□□□□□ -1.04
PDLIM2-212ENST00000443561 Q8N976 141 aa8.56□□□□□ -1.04
PDLIM2-212ENST00000443561 BORCS7Q96B45 105 aa8.56□□□□□ -1.04
PDLIM2-212ENST00000443561 Q9HAA7 133 aa8.56□□□□□ -1.04
PDLIM2-212ENST00000443561 CARHSP1Q9Y2V2 147 aaKnown RBP8.56□□□□□ -1.04
PDLIM2-212ENST00000443561 LRCOL1A6NCL2 159 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 SDHAF1A6NFY7 115 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 PPP1R2P9O14990 202 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 HBBP68871 147 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 GAGE6Q13070 117 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 LAGE3Q14657 143 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 ATRAIDQ6UW56 229 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 ENHOQ6UWT2 76 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 SMIM15Q7Z3B0 74 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 FRZBQ92765 325 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 ANAPC16Q96DE5 110 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 MRAP2Q96G30 205 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 TMEM70Q9BUB7 260 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 CHCHD7Q9BUK0 85 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 KLK12Q9UKR0 248 aa8.55□□□□□ -1.04
PDLIM2-212ENST00000443561 IGLV4-60A0A075B6I1 120 aa8.54□□□□□ -1.04
PDLIM2-212ENST00000443561 IGHV1-24A0A0C4DH33 117 aa8.54□□□□□ -1.04
PDLIM2-212ENST00000443561 TSHBP01222 138 aa8.54□□□□□ -1.04
PDLIM2-212ENST00000443561 MT-ND4LP03901 98 aa8.54□□□□□ -1.04
PDLIM2-212ENST00000443561 RBX1P62877 108 aa8.54□□□□□ -1.04
PDLIM2-212ENST00000443561 C20orf203Q8NBC4 194 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms