RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 TRAV8-4A0A0B4J246 113 aa9□□□□□ -0.97
HMGN1-208ENST00000443046 TRBV6-1A0A0K0K1D8 114 aa9□□□□□ -0.97
HMGN1-208ENST00000443046 P01737 135 aa9□□□□□ -0.97
HMGN1-208ENST00000443046 IQCJQ1A5X6 159 aa9□□□□□ -0.97
HMGN1-208ENST00000443046 SREK1IP1Q8N9Q2 155 aaPredicted RBP9□□□□□ -0.97
HMGN1-208ENST00000443046 ENKURQ8TC29 256 aa9□□□□□ -0.97
HMGN1-208ENST00000443046 HIST1H2BAQ96A08 127 aa9□□□□□ -0.97
HMGN1-208ENST00000443046 ACTR3CQ9C0K3 210 aaPredicted RBP9□□□□□ -0.97
HMGN1-208ENST00000443046 AP5S1Q9NUS5 200 aa9□□□□□ -0.97
HMGN1-208ENST00000443046 TNFSF18Q9UNG2 199 aa9□□□□□ -0.97
HMGN1-208ENST00000443046 INMT-MINDY4F8WBC2 141 aa8.99□□□□□ -0.97
HMGN1-208ENST00000443046 IFNA7P01567 189 aa8.99□□□□□ -0.97
HMGN1-208ENST00000443046 ZNF56Q15929 161 aa8.99□□□□□ -0.97
HMGN1-208ENST00000443046 SPINK6Q6UWN8 80 aa8.99□□□□□ -0.97
HMGN1-208ENST00000443046 C20orf203Q8NBC4 194 aa8.99□□□□□ -0.97
HMGN1-208ENST00000443046 MARVELD1Q9BSK0 173 aa8.99□□□□□ -0.97
HMGN1-208ENST00000443046 DERL1Q9BUN8 251 aa8.99□□□□□ -0.97
HMGN1-208ENST00000443046 TRBV25-1A0A075B6N4 114 aa8.98□□□□□ -0.97
HMGN1-208ENST00000443046 FAM74A7A6NL05 159 aa8.98□□□□□ -0.97
HMGN1-208ENST00000443046 GZMBP10144 247 aa8.98□□□□□ -0.97
HMGN1-208ENST00000443046 SRSF9Q13242 221 aaKnown RBP eCLIP8.98□□□□□ -0.97
HMGN1-208ENST00000443046 ZNF726P1Q15940 193 aa8.98□□□□□ -0.97
HMGN1-208ENST00000443046 OR10AG1Q8NH19 301 aa8.98□□□□□ -0.97
HMGN1-208ENST00000443046 GTSF1Q8WW33 167 aa8.98□□□□□ -0.97
HMGN1-208ENST00000443046 FMC1Q96HJ9 113 aa8.98□□□□□ -0.97
HMGN1-208ENST00000443046 SSBP4Q9BWG4 385 aaPredicted RBP8.98□□□□□ -0.97
HMGN1-208ENST00000443046 NKX6-2Q9C056 277 aaPredicted RBP8.98□□□□□ -0.97
HMGN1-208ENST00000443046 A0A1B0GUV1 79 aa8.97□□□□□ -0.97
HMGN1-208ENST00000443046 LTAP01374 205 aa8.97□□□□□ -0.97
HMGN1-208ENST00000443046 UBE2G2P60604 165 aa8.97□□□□□ -0.97
HMGN1-208ENST00000443046 COX6A2Q02221 97 aa8.97□□□□□ -0.97
HMGN1-208ENST00000443046 LINC00299Q6ZSB3 139 aa8.97□□□□□ -0.97
HMGN1-208ENST00000443046 GFRA4Q9GZZ7 299 aa8.97□□□□□ -0.97
HMGN1-208ENST00000443046 FAT4Q6V0I7 4981 aa8.97□□□□□ -0.97
HMGN1-208ENST00000443046 MUC21A0A0G2JKD1 596 aa8.96□□□□□ -0.98
HMGN1-208ENST00000443046 SNAI2O43623 268 aa8.96□□□□□ -0.98
HMGN1-208ENST00000443046 SSNA1O43805 119 aa8.96□□□□□ -0.98
HMGN1-208ENST00000443046 CXCL1P09341 107 aa8.96□□□□□ -0.98
HMGN1-208ENST00000443046 IFITM3Q01628 133 aa8.96□□□□□ -0.98
HMGN1-208ENST00000443046 REG3GQ6UW15 175 aa8.96□□□□□ -0.98
HMGN1-208ENST00000443046 C15orf56Q8N910 161 aa8.96□□□□□ -0.98
HMGN1-208ENST00000443046 ZNF471Q9BX82 626 aaPredicted RBP8.96□□□□□ -0.98
HMGN1-208ENST00000443046 IGLV4-60A0A075B6I1 120 aa8.95□□□□□ -0.98
HMGN1-208ENST00000443046 IGHV1-24A0A0C4DH33 117 aa8.95□□□□□ -0.98
HMGN1-208ENST00000443046 NDUFS6O75380 124 aaKnown RBP8.95□□□□□ -0.98
HMGN1-208ENST00000443046 MAJINQ3KP22 176 aa8.95□□□□□ -0.98
HMGN1-208ENST00000443046 PRSS3P2Q8NHM4 247 aa8.95□□□□□ -0.98
HMGN1-208ENST00000443046 F5H697 171 aa8.94□□□□□ -0.98
HMGN1-208ENST00000443046 UPK1BO75841 260 aa8.94□□□□□ -0.98
HMGN1-208ENST00000443046 RPS10P46783 165 aaKnown RBP8.94□□□□□ -0.98
HMGN1-208ENST00000443046 STPG4Q8N801 248 aa8.94□□□□□ -0.98
HMGN1-208ENST00000443046 AQP10Q96PS8 301 aa8.94□□□□□ -0.98
HMGN1-208ENST00000443046 CTXND1A0A1B0GTU2 59 aa8.93□□□□□ -0.98
HMGN1-208ENST00000443046 OR5AL1P0C617 328 aa8.93□□□□□ -0.98
HMGN1-208ENST00000443046 RAB5CP51148 216 aa8.93□□□□□ -0.98
HMGN1-208ENST00000443046 UBE2G1P62253 170 aa8.93□□□□□ -0.98
HMGN1-208ENST00000443046 A6NHS1 94 aa8.92□□□□□ -0.98
HMGN1-208ENST00000443046 M0QY20 66 aa8.92□□□□□ -0.98
HMGN1-208ENST00000443046 INO80EQ8NBZ0 244 aaPredicted RBP8.92□□□□□ -0.98
HMGN1-208ENST00000443046 LYPD6BQ8NI32 183 aa8.92□□□□□ -0.98
HMGN1-208ENST00000443046 S100ZQ8WXG8 99 aa8.92□□□□□ -0.98
HMGN1-208ENST00000443046 TCEAL7Q9BRU2 100 aa8.92□□□□□ -0.98
HMGN1-208ENST00000443046 KRTAP9-2Q9BYQ4 174 aa8.92□□□□□ -0.98
HMGN1-208ENST00000443046 IGKV2-24A0A0C4DH68 120 aa8.91□□□□□ -0.98
HMGN1-208ENST00000443046 MUC21A0A140T8X8 626 aa8.91□□□□□ -0.98
HMGN1-208ENST00000443046 FHITP49789 147 aa8.91□□□□□ -0.98
HMGN1-208ENST00000443046 CFAP161Q6P656 301 aa8.91□□□□□ -0.98
HMGN1-208ENST00000443046 A0A096LNI7 61 aa8.9□□□□□ -0.98
HMGN1-208ENST00000443046 SPANXN1Q5VSR9 72 aa8.9□□□□□ -0.98
HMGN1-208ENST00000443046 MLST8Q9BVC4 326 aa8.9□□□□□ -0.98
HMGN1-208ENST00000443046 NDUFA13Q9P0J0 144 aa8.9□□□□□ -0.98
HMGN1-208ENST00000443046 GAGE12HA6NDE8 117 aa8.89□□□□□ -0.99
HMGN1-208ENST00000443046 TMEM243Q9BU79 118 aa8.89□□□□□ -0.99
HMGN1-208ENST00000443046 GVQW2A0A096LPI5 108 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-208ENST00000443046 SMIM17P0DL12 118 aa8.88□□□□□ -0.99
HMGN1-208ENST00000443046 RPL7L1Q6DKI1 246 aaKnown RBP8.88□□□□□ -0.99
HMGN1-208ENST00000443046 Q6ZRP5 223 aa8.88□□□□□ -0.99
HMGN1-208ENST00000443046 PGLYRP4Q96LB8 373 aa8.88□□□□□ -0.99
HMGN1-208ENST00000443046 AP1S3Q96PC3 154 aa8.88□□□□□ -0.99
HMGN1-208ENST00000443046 HIGD2BQ4VC39 106 aa8.87□□□□□ -0.99
HMGN1-208ENST00000443046 SUMO4Q6EEV6 95 aa8.87□□□□□ -0.99
HMGN1-208ENST00000443046 LINC00474Q9P2X8 69 aa8.87□□□□□ -0.99
HMGN1-208ENST00000443046 AKR1C3P42330 323 aa8.86□□□□□ -0.99
HMGN1-208ENST00000443046 DEFA3P59666 94 aa8.86□□□□□ -0.99
HMGN1-208ENST00000443046 MAP1LC3B2A6NCE7 125 aa8.85□□□□□ -0.99
HMGN1-208ENST00000443046 H7C1H1 209 aa8.85□□□□□ -0.99
HMGN1-208ENST00000443046 S100A9P06702 114 aaKnown RBP8.85□□□□□ -0.99
HMGN1-208ENST00000443046 SULT1A2P50226 295 aa8.85□□□□□ -0.99
HMGN1-208ENST00000443046 NKX2-5P52952 324 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-208ENST00000443046 SSTP61278 116 aa8.85□□□□□ -0.99
HMGN1-208ENST00000443046 Q5BKY6 102 aa8.85□□□□□ -0.99
HMGN1-208ENST00000443046 MAP1LC3BQ9GZQ8 125 aa8.85□□□□□ -0.99
HMGN1-208ENST00000443046 CST9LP1Q5W188 147 aa8.84□□□□□ -0.99
HMGN1-208ENST00000443046 STOML3Q8TAV4 291 aa8.84□□□□□ -0.99
HMGN1-208ENST00000443046 BORCS7-ASMTA0A0B4J1R7 106 aa8.83□□□□□ -1
HMGN1-208ENST00000443046 AKR1C8PQ5T2L2 129 aa8.83□□□□□ -1
HMGN1-208ENST00000443046 RASL11AQ6T310 242 aa8.83□□□□□ -1
HMGN1-208ENST00000443046 BAGE2Q86Y30 109 aa8.83□□□□□ -1
HMGN1-208ENST00000443046 CHCHD10Q8WYQ3 142 aaPredicted RBP8.83□□□□□ -1
HMGN1-208ENST00000443046 MED28Q9H204 178 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms