RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 PRO1933Q9H354 126 aa10.5□□□□□ -0.73
LINC00299-202ENST00000442956 EDA2RQ9HAV5 297 aa10.5□□□□□ -0.73
LINC00299-202ENST00000442956 KIR2DL5BA0A0G2JN68 375 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 KIR2DL5BA0A0G2JPC4 375 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 P0DMU3 169 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 FAM231AP0DMU4 169 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 FAM231CP0DMU5 169 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 ATOH7Q8N100 152 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 KIR2DL5AQ8N109 375 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 KIR2DL5BQ8NHK3 375 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 IFI27L1Q96BM0 104 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 CMYA5Q8N3K9 4069 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 TRBV27A0A0K0K1C4 114 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 C20orf202A1L168 122 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 OR4C5Q8NGB2 326 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 VAMP8Q9BV40 100 aa10.49□□□□□ -0.73
LINC00299-202ENST00000442956 APOC4P55056 127 aa10.48□□□□□ -0.73
LINC00299-202ENST00000442956 ZFP2Q6ZN57 461 aa10.48□□□□□ -0.73
LINC00299-202ENST00000442956 DEFB104AQ8WTQ1 72 aa10.48□□□□□ -0.73
LINC00299-202ENST00000442956 KIR2DL4Q99706 377 aa10.48□□□□□ -0.73
LINC00299-202ENST00000442956 PKIAP61925 76 aa10.47□□□□□ -0.73
LINC00299-202ENST00000442956 PAM16Q9Y3D7 125 aa10.47□□□□□ -0.73
LINC00299-202ENST00000442956 IGHV3-53P01767 116 aa10.47□□□□□ -0.73
LINC00299-202ENST00000442956 IGHV4-30-4P0DP06 118 aa10.47□□□□□ -0.73
LINC00299-202ENST00000442956 LINC01545Q5VT33 79 aa10.47□□□□□ -0.73
LINC00299-202ENST00000442956 ZNF479Q96JC4 524 aa10.47□□□□□ -0.73
LINC00299-202ENST00000442956 OVOL2Q9BRP0 275 aa10.47□□□□□ -0.73
LINC00299-202ENST00000442956 TSTD3H0UI37 97 aa10.46□□□□□ -0.73
LINC00299-202ENST00000442956 EMP1P54849 157 aa10.46□□□□□ -0.73
LINC00299-202ENST00000442956 KRTAP10-11P60412 298 aa10.46□□□□□ -0.73
LINC00299-202ENST00000442956 PMCHL2Q9BQD1 86 aa10.46□□□□□ -0.73
LINC00299-202ENST00000442956 Q9UF83 564 aa10.46□□□□□ -0.73
LINC00299-202ENST00000442956 ANK2Q01484 3957 aa10.46□□□□□ -0.74
LINC00299-202ENST00000442956 GAGE12BA1L429 117 aa10.46□□□□□ -0.74
LINC00299-202ENST00000442956 GAGE7O76087 117 aa10.46□□□□□ -0.74
LINC00299-202ENST00000442956 GAGE12FP0CL80 117 aa10.46□□□□□ -0.74
LINC00299-202ENST00000442956 GAGE12GP0CL81 117 aa10.46□□□□□ -0.74
LINC00299-202ENST00000442956 GAGE12IP0CL82 117 aa10.46□□□□□ -0.74
LINC00299-202ENST00000442956 DEFB135Q30KP9 77 aa10.46□□□□□ -0.74
LINC00299-202ENST00000442956 X6R8D5 127 aa10.46□□□□□ -0.74
LINC00299-202ENST00000442956 NACAE9PAV3 2078 aa10.45□□□□□ -0.74
LINC00299-202ENST00000442956 TRAV4A0A0B4J268 109 aa10.45□□□□□ -0.74
LINC00299-202ENST00000442956 TOMM6Q96B49 74 aa10.45□□□□□ -0.74
LINC00299-202ENST00000442956 TNFRSF18Q9Y5U5 241 aa10.45□□□□□ -0.74
LINC00299-202ENST00000442956 TRGV2A0A075B6R0 118 aa10.45□□□□□ -0.74
LINC00299-202ENST00000442956 ATP5LO75964 103 aa10.45□□□□□ -0.74
LINC00299-202ENST00000442956 C2orf66Q6UXQ4 117 aa10.45□□□□□ -0.74
LINC00299-202ENST00000442956 SMIM9A6NGZ8 99 aa10.44□□□□□ -0.74
LINC00299-202ENST00000442956 EGFEM1PQ0D2K5 195 aa10.44□□□□□ -0.74
LINC00299-202ENST00000442956 MAJINQ3KP22 176 aa10.44□□□□□ -0.74
LINC00299-202ENST00000442956 I3L3M4 83 aa10.44□□□□□ -0.74
LINC00299-202ENST00000442956 NEXN-AS1Q8NBZ9 246 aa10.44□□□□□ -0.74
LINC00299-202ENST00000442956 TSHBP01222 138 aa10.43□□□□□ -0.74
LINC00299-202ENST00000442956 PRSS1P07477 247 aa10.43□□□□□ -0.74
LINC00299-202ENST00000442956 SCGB3A1Q96QR1 104 aa10.43□□□□□ -0.74
LINC00299-202ENST00000442956 TRAV9-2A0A087WT02 112 aa10.42□□□□□ -0.74
LINC00299-202ENST00000442956 SPATA45Q537H7 98 aa10.42□□□□□ -0.74
LINC00299-202ENST00000442956 LGALS9CQ6DKI2 356 aa10.42□□□□□ -0.74
LINC00299-202ENST00000442956 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.42□□□□□ -0.74
LINC00299-202ENST00000442956 G0S2P27469 103 aa10.42□□□□□ -0.74
LINC00299-202ENST00000442956 CYSLTR1Q9Y271 337 aa10.42□□□□□ -0.74
LINC00299-202ENST00000442956 OR11H2Q8NH07 326 aa10.41□□□□□ -0.74
LINC00299-202ENST00000442956 DNAJC30Q96LL9 226 aa10.41□□□□□ -0.74
LINC00299-202ENST00000442956 TP53TG1Q9Y2A0 90 aa10.41□□□□□ -0.74
LINC00299-202ENST00000442956 LINC00587B1AMM8 73 aa10.41□□□□□ -0.74
LINC00299-202ENST00000442956 RIPPLY3P57055 190 aa10.41□□□□□ -0.74
LINC00299-202ENST00000442956 RHOHQ15669 191 aa10.41□□□□□ -0.74
LINC00299-202ENST00000442956 NOTCH1P46531 2555 aa10.41□□□□□ -0.74
LINC00299-202ENST00000442956 G3V4G9 280 aa10.4□□□□□ -0.74
LINC00299-202ENST00000442956 RPL39P62891 51 aaKnown RBP10.4□□□□□ -0.74
LINC00299-202ENST00000442956 DKK2Q9UBU2 259 aa10.4□□□□□ -0.74
LINC00299-202ENST00000442956 ZMAT5Q9UDW3 170 aaKnown RBP10.4□□□□□ -0.74
LINC00299-202ENST00000442956 K7EQD1 137 aa10.4□□□□□ -0.74
LINC00299-202ENST00000442956 DEFB130BP0DP73 79 aa10.4□□□□□ -0.74
LINC00299-202ENST00000442956 DEFB130AP0DP74 79 aa10.4□□□□□ -0.74
LINC00299-202ENST00000442956 DDTP30046 118 aa10.4□□□□□ -0.74
LINC00299-202ENST00000442956 ODF1Q14990 250 aa10.4□□□□□ -0.74
LINC00299-202ENST00000442956 Q6ZN92 141 aa10.4□□□□□ -0.74
LINC00299-202ENST00000442956 ERASQ7Z444 233 aa10.4□□□□□ -0.74
LINC00299-202ENST00000442956 SLC25A29Q8N8R3 303 aa10.4□□□□□ -0.74
LINC00299-202ENST00000442956 hDV102S1A0JD36 115 aa10.39□□□□□ -0.75
LINC00299-202ENST00000442956 LINC01549A6NIU2 74 aa10.39□□□□□ -0.75
LINC00299-202ENST00000442956 IGHV4-28A0A0C4DH34 117 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 TRBV10-1A0A0K0K1A3 114 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 CIDEAO60543 219 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 LINC00612Q8N6U2 182 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 ZNRF2Q8NHG8 242 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 RNF183Q96D59 192 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 NBEAL1Q6ZS30 2694 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 DNAH3Q8TD57 4116 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 TRBV7-3A0A075B6L6 115 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 IGHV3-38A0A0C4DH36 116 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 IGIPA6NJ69 53 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 HSBP1L1C9JCN9 74 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 DEFB4AO15263 64 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 C20orf203Q8NBC4 194 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 PHLDA1Q8WV24 401 aaPredicted RBP10.38□□□□□ -0.75
LINC00299-202ENST00000442956 ZMAT4Q9H898 229 aa10.38□□□□□ -0.75
LINC00299-202ENST00000442956 TRGV4A0A0C4DH28 118 aa10.37□□□□□ -0.75
LINC00299-202ENST00000442956 RPL36AP83881 106 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 241.7 ms