RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 LGALS9CQ6DKI2 356 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 FAM19A5Q7Z5A7 132 aaPredicted RBP6.03□□□□□ -1.44
CCDC39-201ENST00000442201 RPP21Q9H633 154 aaKnown RBP6.03□□□□□ -1.44
CCDC39-201ENST00000442201 GAGE2DQ9UEU5 116 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 LENEPQ9Y5L5 61 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 F6UB75 175 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 DEFB1P60022 68 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 KIR2DL4Q99706 377 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 ZNF747Q9BV97 191 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 SPANXCQ9NY87 97 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 WNK1Q9H4A3 2382 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 A8MWL6 223 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 F5H768 121 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 J3KT08 172 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 CRIP1P50238 77 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 CT83Q5H943 113 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 TEP1Q99973 2627 aaKnown RBP6.02□□□□□ -1.45
CCDC39-201ENST00000442201 LINC00694P0DN24 101 aa6.02□□□□□ -1.45
CCDC39-201ENST00000442201 ANXA2RQ3ZCQ2 193 aa6.02□□□□□ -1.45
CCDC39-201ENST00000442201 TEN1Q86WV5 123 aa6.02□□□□□ -1.45
CCDC39-201ENST00000442201 MAST4O15021 2626 aa6.02□□□□□ -1.45
CCDC39-201ENST00000442201 SH2D1AO60880 128 aa6.02□□□□□ -1.45
CCDC39-201ENST00000442201 HLA-DRB4P13762 266 aa6.02□□□□□ -1.45
CCDC39-201ENST00000442201 RRN3P1Q2M238 152 aa6.02□□□□□ -1.45
CCDC39-201ENST00000442201 NUP35Q8NFH5 326 aa6.02□□□□□ -1.45
CCDC39-201ENST00000442201 ZNRF2Q8NHG8 242 aa6.02□□□□□ -1.45
CCDC39-201ENST00000442201 TMEM101Q96IK0 257 aa6.02□□□□□ -1.45
CCDC39-201ENST00000442201 HLA-DRB4X5D2U9 266 aa6.02□□□□□ -1.45
CCDC39-201ENST00000442201 TRBV20-1A0A075B6N2 111 aa6.01□□□□□ -1.45
CCDC39-201ENST00000442201 K7ERJ3 54 aa6.01□□□□□ -1.45
CCDC39-201ENST00000442201 TAL2Q16559 108 aa6.01□□□□□ -1.45
CCDC39-201ENST00000442201 TTC32Q5I0X7 151 aa6.01□□□□□ -1.45
CCDC39-201ENST00000442201 CEND1Q8N111 149 aa6.01□□□□□ -1.45
CCDC39-201ENST00000442201 BAALCQ8WXS3 180 aa6.01□□□□□ -1.45
CCDC39-201ENST00000442201 A0A0J9YX75 114 aa6.01□□□□□ -1.45
CCDC39-201ENST00000442201 NCR2O95944 276 aa6.01□□□□□ -1.45
CCDC39-201ENST00000442201 ZNF80P51504 273 aaPredicted RBP6.01□□□□□ -1.45
CCDC39-201ENST00000442201 OR13C6PQ8NH95 151 aa6.01□□□□□ -1.45
CCDC39-201ENST00000442201 DUSP14O95147 198 aaKnown RBP6.01□□□□□ -1.45
CCDC39-201ENST00000442201 DEFB131AP59861 70 aa6.01□□□□□ -1.45
CCDC39-201ENST00000442201 KRTAP24-1Q3LI83 254 aa6.01□□□□□ -1.45
CCDC39-201ENST00000442201 LINC00482Q8N8I6 264 aa6.01□□□□□ -1.45
CCDC39-201ENST00000442201 HIGD1CA8MV81 97 aa6□□□□□ -1.45
CCDC39-201ENST00000442201 MCRIP2Q9BUT9 160 aaKnown RBP6□□□□□ -1.45
CCDC39-201ENST00000442201 GFRA4Q9GZZ7 299 aa6□□□□□ -1.45
CCDC39-201ENST00000442201 C9JAW5 83 aa6□□□□□ -1.45
CCDC39-201ENST00000442201 IGLV1-51P01701 117 aa6□□□□□ -1.45
CCDC39-201ENST00000442201 AMTNQ6UX39 209 aa6□□□□□ -1.45
CCDC39-201ENST00000442201 ZFAND2AQ8N6M9 145 aa6□□□□□ -1.45
CCDC39-201ENST00000442201 ZNF256Q9Y2P7 627 aaPredicted RBP6□□□□□ -1.45
CCDC39-201ENST00000442201 ATRQ13535 2644 aa6□□□□□ -1.45
CCDC39-201ENST00000442201 TRAV4A0A0B4J268 109 aa6□□□□□ -1.45
CCDC39-201ENST00000442201 ORM1P02763 201 aa6□□□□□ -1.45
CCDC39-201ENST00000442201 NMUP48645 174 aa6□□□□□ -1.45
CCDC39-201ENST00000442201 FAM19A4Q96LR4 140 aa6□□□□□ -1.45
CCDC39-201ENST00000442201 TMSB15BA0A087X1C1 80 aa5.99□□□□□ -1.45
CCDC39-201ENST00000442201 LOC107984640A0A0U1RRK4 108 aa5.99□□□□□ -1.45
CCDC39-201ENST00000442201 GCSHP23434 173 aa5.99□□□□□ -1.45
CCDC39-201ENST00000442201 C12orf74Q32Q52 190 aa5.99□□□□□ -1.45
CCDC39-201ENST00000442201 ODF3Q96PU9 254 aa5.99□□□□□ -1.45
CCDC39-201ENST00000442201 CHAC1Q9BUX1 264 aa5.99□□□□□ -1.45
CCDC39-201ENST00000442201 MAP6D1Q9H9H5 199 aa5.99□□□□□ -1.45
CCDC39-201ENST00000442201 IGKV3-20P01619 116 aa5.99□□□□□ -1.45
CCDC39-201ENST00000442201 PCP2Q8IVA1 136 aa5.99□□□□□ -1.45
CCDC39-201ENST00000442201 TRAV21A0A0B4J279 112 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 SNCGO76070 127 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 LEPP41159 167 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 PRR9Q5T870 116 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 APRG1Q8IVJ8 170 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 NHP2Q9NX24 153 aaKnown RBP5.98□□□□□ -1.45
CCDC39-201ENST00000442201 KNCNA6PVL3 124 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 CRYGDP07320 174 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 FOXA3P55318 350 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-201ENST00000442201 LINC01559Q495D7 138 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 PRIMA1Q86XR5 153 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 TMEM158Q8WZ71 300 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 PGLYRP4Q96LB8 373 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 KLLNB2CW77 178 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 M0R2P5 195 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 RNASE4P34096 147 aaKnown RBP5.98□□□□□ -1.45
CCDC39-201ENST00000442201 CMC4P56277 68 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-201ENST00000442201 MRPL23Q16540 153 aaKnown RBP5.98□□□□□ -1.45
CCDC39-201ENST00000442201 PRADC1Q9BSG0 188 aa5.98□□□□□ -1.45
CCDC39-201ENST00000442201 H3BMM0 161 aa5.97□□□□□ -1.45
CCDC39-201ENST00000442201 HBBP68871 147 aa5.97□□□□□ -1.45
CCDC39-201ENST00000442201 ODF3L2Q3SX64 289 aa5.97□□□□□ -1.45
CCDC39-201ENST00000442201 LINC01600Q96MT4 127 aa5.97□□□□□ -1.45
CCDC39-201ENST00000442201 AP5S1Q9NUS5 200 aa5.97□□□□□ -1.45
CCDC39-201ENST00000442201 C11orf21Q9P2W6 132 aa5.97□□□□□ -1.45
CCDC39-201ENST00000442201 A0A096LNJ9 63 aa5.96□□□□□ -1.45
CCDC39-201ENST00000442201 IGKV3D-20A0A0C4DH25 116 aa5.96□□□□□ -1.45
CCDC39-201ENST00000442201 C9orf66Q5T8R8 295 aa5.96□□□□□ -1.45
CCDC39-201ENST00000442201 MORN3Q6PF18 240 aaPredicted RBP5.96□□□□□ -1.45
CCDC39-201ENST00000442201 C3orf56Q8N813 242 aa5.96□□□□□ -1.45
CCDC39-201ENST00000442201 TENM1Q9UKZ4 2725 aa5.96□□□□□ -1.46
CCDC39-201ENST00000442201 A0A1B0GUT8 65 aa5.96□□□□□ -1.46
CCDC39-201ENST00000442201 SPINK13Q1W4C9 94 aa5.96□□□□□ -1.46
CCDC39-201ENST00000442201 GATD1Q8NB37 220 aa5.96□□□□□ -1.46
CCDC39-201ENST00000442201 ZMAT4Q9H898 229 aa5.96□□□□□ -1.46
CCDC39-201ENST00000442201 A8MTW9 85 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms