RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 OR5AL1P0C617 328 aa7.57□□□□□ -1.2
UBE2D4-204ENST00000440899 RGS21Q2M5E4 152 aa7.57□□□□□ -1.2
UBE2D4-204ENST00000440899 MPV17L2Q567V2 206 aa7.57□□□□□ -1.2
UBE2D4-204ENST00000440899 TMEM97Q5BJF2 176 aa7.57□□□□□ -1.2
UBE2D4-204ENST00000440899 SPANXN1Q5VSR9 72 aa7.57□□□□□ -1.2
UBE2D4-204ENST00000440899 KCNRGQ8N5I3 272 aa7.57□□□□□ -1.2
UBE2D4-204ENST00000440899 FAM213BQ8TBF2 198 aa7.57□□□□□ -1.2
UBE2D4-204ENST00000440899 CHCHD5Q9BSY4 110 aa7.57□□□□□ -1.2
UBE2D4-204ENST00000440899 F5H697 171 aa7.56□□□□□ -1.2
UBE2D4-204ENST00000440899 IGLV2-8P01709 118 aa7.56□□□□□ -1.2
UBE2D4-204ENST00000440899 KRTAP10-4P60372 401 aaPredicted RBP7.56□□□□□ -1.2
UBE2D4-204ENST00000440899 ZNF345Q14585 488 aa7.56□□□□□ -1.2
UBE2D4-204ENST00000440899 MIAQ16674 131 aa7.56□□□□□ -1.2
UBE2D4-204ENST00000440899 TMUB2Q71RG4 321 aa7.56□□□□□ -1.2
UBE2D4-204ENST00000440899 VAX2Q9UIW0 290 aa7.56□□□□□ -1.2
UBE2D4-204ENST00000440899 MUC21A0A0G2JKD1 596 aa7.55□□□□□ -1.2
UBE2D4-204ENST00000440899 MUC21A0A140T8X8 626 aa7.55□□□□□ -1.2
UBE2D4-204ENST00000440899 A0A1B0GV50 99 aa7.55□□□□□ -1.2
UBE2D4-204ENST00000440899 SMIM17P0DL12 118 aa7.55□□□□□ -1.2
UBE2D4-204ENST00000440899 NTM-AS1Q6ZSK4 140 aa7.55□□□□□ -1.2
UBE2D4-204ENST00000440899 FAT3Q8TDW7 4589 aa7.54□□□□□ -1.2
UBE2D4-204ENST00000440899 A0A0D9SG52 128 aa7.54□□□□□ -1.2
UBE2D4-204ENST00000440899 USP17L23D6RBM5 183 aa7.54□□□□□ -1.2
UBE2D4-204ENST00000440899 SMLR1H3BR10 107 aa7.54□□□□□ -1.2
UBE2D4-204ENST00000440899 OXTP01178 125 aa7.54□□□□□ -1.2
UBE2D4-204ENST00000440899 H2AFB1P0C5Y9 115 aa7.54□□□□□ -1.2
UBE2D4-204ENST00000440899 SSTP61278 116 aa7.54□□□□□ -1.2
UBE2D4-204ENST00000440899 DGAT2L7PQ6IED9 249 aa7.54□□□□□ -1.2
UBE2D4-204ENST00000440899 AP1S3Q96PC3 154 aa7.54□□□□□ -1.2
UBE2D4-204ENST00000440899 DERL1Q9BUN8 251 aa7.54□□□□□ -1.2
UBE2D4-204ENST00000440899 PRR34Q9NV39 138 aa7.54□□□□□ -1.2
UBE2D4-204ENST00000440899 KIF25-AS1Q9Y6Z4 181 aa7.54□□□□□ -1.2
UBE2D4-204ENST00000440899 TRBV25-1A0A075B6N4 114 aa7.53□□□□□ -1.2
UBE2D4-204ENST00000440899 HMSDA8MTL9 139 aa7.53□□□□□ -1.2
UBE2D4-204ENST00000440899 HLA-DQA1P01909 254 aa7.53□□□□□ -1.2
UBE2D4-204ENST00000440899 RPL35P42766 123 aaKnown RBP7.53□□□□□ -1.2
UBE2D4-204ENST00000440899 RBX1P62877 108 aa7.53□□□□□ -1.2
UBE2D4-204ENST00000440899 SERTAD4-AS1Q5TG53 156 aa7.53□□□□□ -1.2
UBE2D4-204ENST00000440899 KANTRA0A1W2PQU2 76 aa7.52□□□□□ -1.21
UBE2D4-204ENST00000440899 BCL2L11O43521 198 aa7.52□□□□□ -1.21
UBE2D4-204ENST00000440899 PRSS1P07477 247 aa7.52□□□□□ -1.21
UBE2D4-204ENST00000440899 EIF5AP63241 154 aaKnown RBP7.52□□□□□ -1.21
UBE2D4-204ENST00000440899 LINC00269Q8N2A0 174 aa7.52□□□□□ -1.21
UBE2D4-204ENST00000440899 C9orf163Q8N9P6 203 aa7.52□□□□□ -1.21
UBE2D4-204ENST00000440899 H7C1H1 209 aa7.51□□□□□ -1.21
UBE2D4-204ENST00000440899 GAGE6Q13070 117 aa7.51□□□□□ -1.21
UBE2D4-204ENST00000440899 IQCJQ1A5X6 159 aa7.51□□□□□ -1.21
UBE2D4-204ENST00000440899 KRTAP26-1Q6PEX3 210 aa7.51□□□□□ -1.21
UBE2D4-204ENST00000440899 DAZAP1Q96EP5 407 aaKnown RBP7.51□□□□□ -1.21
UBE2D4-204ENST00000440899 MANBALQ9NQG1 85 aa7.51□□□□□ -1.21
UBE2D4-204ENST00000440899 PKHD1L1Q86WI1 4243 aa7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 IGHV1-24A0A0C4DH33 117 aa7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 M0QY20 66 aa7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 IGLC6P0CF74 106 aa7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 RPS20P60866 119 aaKnown RBP7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 RPL37AP61513 92 aaKnown RBP7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 CCL20P78556 96 aa7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 CLPSL2Q6UWE3 100 aa7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 FER1L6-AS1Q8NA97 138 aa7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 CLRN3Q8NCR9 226 aa7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 C11orf52Q96A22 123 aa7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 TPPP3Q9BW30 176 aa7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 GNG13Q9P2W3 67 aa7.5□□□□□ -1.21
UBE2D4-204ENST00000440899 TRAV1-1A0A0B4J248 108 aa7.49□□□□□ -1.21
UBE2D4-204ENST00000440899 MGPP08493 103 aa7.49□□□□□ -1.21
UBE2D4-204ENST00000440899 GZMBP10144 247 aa7.49□□□□□ -1.21
UBE2D4-204ENST00000440899 CACNG7P62955 275 aa7.49□□□□□ -1.21
UBE2D4-204ENST00000440899 CENPWQ5EE01 88 aa7.49□□□□□ -1.21
UBE2D4-204ENST00000440899 OR2D3Q8NGH3 330 aa7.49□□□□□ -1.21
UBE2D4-204ENST00000440899 HMCN2Q8NDA2 5059 aa7.49□□□□□ -1.21
UBE2D4-204ENST00000440899 TRAV8-4A0A0B4J246 113 aa7.48□□□□□ -1.21
UBE2D4-204ENST00000440899 XKRY2A2RUG3 117 aa7.48□□□□□ -1.21
UBE2D4-204ENST00000440899 C19orf71A6NCJ1 209 aa7.48□□□□□ -1.21
UBE2D4-204ENST00000440899 F2Z2F3 143 aa7.48□□□□□ -1.21
UBE2D4-204ENST00000440899 TEX46H3BTG2 121 aa7.48□□□□□ -1.21
UBE2D4-204ENST00000440899 P01737 135 aa7.48□□□□□ -1.21
UBE2D4-204ENST00000440899 REG3AQ06141 175 aa7.48□□□□□ -1.21
UBE2D4-204ENST00000440899 SUMO4Q6EEV6 95 aa7.48□□□□□ -1.21
UBE2D4-204ENST00000440899 SDIM1Q6ZPB5 146 aa7.48□□□□□ -1.21
UBE2D4-204ENST00000440899 SMIM12Q96EX1 92 aa7.48□□□□□ -1.21
UBE2D4-204ENST00000440899 IGLV10-54A0A075B6I4 117 aa7.47□□□□□ -1.21
UBE2D4-204ENST00000440899 A0A1B0GUV1 79 aa7.47□□□□□ -1.21
UBE2D4-204ENST00000440899 GNG4P50150 75 aa7.47□□□□□ -1.21
UBE2D4-204ENST00000440899 RAB5CP51148 216 aa7.47□□□□□ -1.21
UBE2D4-204ENST00000440899 CNBPP62633 177 aaKnown RBP7.47□□□□□ -1.21
UBE2D4-204ENST00000440899 RASL11AQ6T310 242 aa7.47□□□□□ -1.21
UBE2D4-204ENST00000440899 TMEM243Q9BU79 118 aa7.47□□□□□ -1.21
UBE2D4-204ENST00000440899 NIT2Q9NQR4 276 aa7.47□□□□□ -1.21
UBE2D4-204ENST00000440899 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.47□□□□□ -1.21
UBE2D4-204ENST00000440899 RAB19A4D1S5 217 aa7.46□□□□□ -1.22
UBE2D4-204ENST00000440899 PDE6DO43924 150 aa7.46□□□□□ -1.22
UBE2D4-204ENST00000440899 IFNA1P01562 189 aa7.46□□□□□ -1.22
UBE2D4-204ENST00000440899 TRGC1P0CF51 173 aa7.46□□□□□ -1.22
UBE2D4-204ENST00000440899 NKX2-5P52952 324 aaPredicted RBP7.46□□□□□ -1.22
UBE2D4-204ENST00000440899 EIF5AL1Q6IS14 154 aaKnown RBP7.46□□□□□ -1.22
UBE2D4-204ENST00000440899 C20orf203Q8NBC4 194 aa7.46□□□□□ -1.22
UBE2D4-204ENST00000440899 PGLYRP4Q96LB8 373 aa7.46□□□□□ -1.22
UBE2D4-204ENST00000440899 BIN3Q9NQY0 253 aa7.46□□□□□ -1.22
UBE2D4-204ENST00000440899 IGLV4-60A0A075B6I1 120 aa7.45□□□□□ -1.22
UBE2D4-204ENST00000440899 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms