RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 ZNF471Q9BX82 626 aaPredicted RBP9□□□□□ -0.97
PTPRN-205ENST00000440552 TRBV25-1A0A075B6N4 114 aa8.99□□□□□ -0.97
PTPRN-205ENST00000440552 IGHV3-64A0A075B6Q5 118 aa8.99□□□□□ -0.97
PTPRN-205ENST00000440552 A0A087WYN8 130 aa8.99□□□□□ -0.97
PTPRN-205ENST00000440552 TRAV8-4A0A0B4J246 113 aa8.99□□□□□ -0.97
PTPRN-205ENST00000440552 P01737 135 aa8.99□□□□□ -0.97
PTPRN-205ENST00000440552 FHITP49789 147 aa8.99□□□□□ -0.97
PTPRN-205ENST00000440552 GAGE6Q13070 117 aa8.99□□□□□ -0.97
PTPRN-205ENST00000440552 IQCJQ1A5X6 159 aa8.99□□□□□ -0.97
PTPRN-205ENST00000440552 CLPSL2Q6UWE3 100 aa8.99□□□□□ -0.97
PTPRN-205ENST00000440552 OR10AG1Q8NH19 301 aa8.99□□□□□ -0.97
PTPRN-205ENST00000440552 SSBP4Q9BWG4 385 aaPredicted RBP8.99□□□□□ -0.97
PTPRN-205ENST00000440552 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.98□□□□□ -0.97
PTPRN-205ENST00000440552 hDV102S1A0JD36 115 aa8.98□□□□□ -0.97
PTPRN-205ENST00000440552 A6NHS1 94 aa8.98□□□□□ -0.97
PTPRN-205ENST00000440552 SNAI2O43623 268 aa8.98□□□□□ -0.97
PTPRN-205ENST00000440552 RPL7L1Q6DKI1 246 aaKnown RBP8.98□□□□□ -0.97
PTPRN-205ENST00000440552 SPACA4Q8TDM5 124 aa8.98□□□□□ -0.97
PTPRN-205ENST00000440552 DERL1Q9BUN8 251 aa8.98□□□□□ -0.97
PTPRN-205ENST00000440552 AP5S1Q9NUS5 200 aa8.98□□□□□ -0.97
PTPRN-205ENST00000440552 PLAC8Q9NZF1 115 aa8.98□□□□□ -0.97
PTPRN-205ENST00000440552 BORCS7-ASMTA0A0B4J1R7 106 aa8.97□□□□□ -0.97
PTPRN-205ENST00000440552 OR5AL1P0C617 328 aa8.97□□□□□ -0.97
PTPRN-205ENST00000440552 GZMBP10144 247 aa8.97□□□□□ -0.97
PTPRN-205ENST00000440552 REG3AQ06141 175 aa8.97□□□□□ -0.97
PTPRN-205ENST00000440552 DPH3Q96FX2 82 aa8.97□□□□□ -0.97
PTPRN-205ENST00000440552 LINC01600Q96MT4 127 aa8.97□□□□□ -0.97
PTPRN-205ENST00000440552 KIF25-AS1Q9Y6Z4 181 aa8.97□□□□□ -0.97
PTPRN-205ENST00000440552 IGHV1-24A0A0C4DH33 117 aa8.96□□□□□ -0.98
PTPRN-205ENST00000440552 F5H697 171 aa8.96□□□□□ -0.98
PTPRN-205ENST00000440552 SLPIP03973 132 aa8.96□□□□□ -0.98
PTPRN-205ENST00000440552 INO80EQ8NBZ0 244 aaPredicted RBP8.96□□□□□ -0.98
PTPRN-205ENST00000440552 DPH3P1Q9H4G8 78 aa8.96□□□□□ -0.98
PTPRN-205ENST00000440552 ALG5Q9Y673 324 aa8.96□□□□□ -0.98
PTPRN-205ENST00000440552 IGLV10-54A0A075B6I4 117 aa8.95□□□□□ -0.98
PTPRN-205ENST00000440552 A0A1B0GUV1 79 aa8.95□□□□□ -0.98
PTPRN-205ENST00000440552 MAP1LC3B2A6NCE7 125 aa8.95□□□□□ -0.98
PTPRN-205ENST00000440552 S100A9P06702 114 aaKnown RBP8.95□□□□□ -0.98
PTPRN-205ENST00000440552 CHTF8P0CG12 524 aa8.95□□□□□ -0.98
PTPRN-205ENST00000440552 AKR1C3P42330 323 aa8.95□□□□□ -0.98
PTPRN-205ENST00000440552 AKR1C8PQ5T2L2 129 aa8.95□□□□□ -0.98
PTPRN-205ENST00000440552 SPANXN1Q5VSR9 72 aa8.95□□□□□ -0.98
PTPRN-205ENST00000440552 C20orf203Q8NBC4 194 aa8.95□□□□□ -0.98
PTPRN-205ENST00000440552 C7orf33Q8WU49 177 aa8.95□□□□□ -0.98
PTPRN-205ENST00000440552 MAP1LC3BQ9GZQ8 125 aa8.95□□□□□ -0.98
PTPRN-205ENST00000440552 PHOX2AO14813 284 aa8.94□□□□□ -0.98
PTPRN-205ENST00000440552 Q5BKY6 102 aa8.94□□□□□ -0.98
PTPRN-205ENST00000440552 MLST8Q9BVC4 326 aa8.94□□□□□ -0.98
PTPRN-205ENST00000440552 SMIM17P0DL12 118 aa8.93□□□□□ -0.98
PTPRN-205ENST00000440552 CST9LP1Q5W188 147 aa8.93□□□□□ -0.98
PTPRN-205ENST00000440552 STOML3Q8TAV4 291 aa8.93□□□□□ -0.98
PTPRN-205ENST00000440552 AP1S3Q96PC3 154 aa8.93□□□□□ -0.98
PTPRN-205ENST00000440552 M0QY20 66 aa8.92□□□□□ -0.98
PTPRN-205ENST00000440552 GIPP09681 153 aaPredicted RBP8.92□□□□□ -0.98
PTPRN-205ENST00000440552 MED28Q9H204 178 aa8.92□□□□□ -0.98
PTPRN-205ENST00000440552 MUC21A0A0G2JKD1 596 aa8.91□□□□□ -0.98
PTPRN-205ENST00000440552 MUC21A0A140T8X8 626 aa8.91□□□□□ -0.98
PTPRN-205ENST00000440552 H7C1H1 209 aa8.91□□□□□ -0.98
PTPRN-205ENST00000440552 BAGE2Q86Y30 109 aa8.91□□□□□ -0.98
PTPRN-205ENST00000440552 TMEM243Q9BU79 118 aa8.91□□□□□ -0.98
PTPRN-205ENST00000440552 GFRA4Q9GZZ7 299 aa8.91□□□□□ -0.98
PTPRN-205ENST00000440552 IGLV4-60A0A075B6I1 120 aa8.9□□□□□ -0.98
PTPRN-205ENST00000440552 A0A0J9YXV3 536 aa8.9□□□□□ -0.98
PTPRN-205ENST00000440552 KRTAP10-8P60410 259 aa8.9□□□□□ -0.98
PTPRN-205ENST00000440552 PRR3P79522 188 aaKnown RBP8.9□□□□□ -0.98
PTPRN-205ENST00000440552 WDR73Q6P4I2 378 aa8.9□□□□□ -0.98
PTPRN-205ENST00000440552 CFAP161Q6P656 301 aa8.9□□□□□ -0.98
PTPRN-205ENST00000440552 PAGE4O60829 102 aa8.89□□□□□ -0.99
PTPRN-205ENST00000440552 RPS10P46783 165 aaKnown RBP8.89□□□□□ -0.99
PTPRN-205ENST00000440552 COX6A2Q02221 97 aa8.89□□□□□ -0.99
PTPRN-205ENST00000440552 C15orf56Q8N910 161 aa8.89□□□□□ -0.99
PTPRN-205ENST00000440552 PGLYRP4Q96LB8 373 aa8.89□□□□□ -0.99
PTPRN-205ENST00000440552 FXYD6-FXYD2A0A087WZ82 144 aa8.88□□□□□ -0.99
PTPRN-205ENST00000440552 NDUFS6O75380 124 aaKnown RBP8.88□□□□□ -0.99
PTPRN-205ENST00000440552 SUMO4Q6EEV6 95 aa8.88□□□□□ -0.99
PTPRN-205ENST00000440552 SCO2A0A1W2PP80 73 aa8.87□□□□□ -0.99
PTPRN-205ENST00000440552 RAB5CP51148 216 aa8.87□□□□□ -0.99
PTPRN-205ENST00000440552 SSTP61278 116 aa8.87□□□□□ -0.99
PTPRN-205ENST00000440552 MAJINQ3KP22 176 aa8.87□□□□□ -0.99
PTPRN-205ENST00000440552 SPINK6Q6UWN8 80 aa8.87□□□□□ -0.99
PTPRN-205ENST00000440552 GTSF1Q8WW33 167 aa8.87□□□□□ -0.99
PTPRN-205ENST00000440552 CYTL1Q9NRR1 136 aa8.87□□□□□ -0.99
PTPRN-205ENST00000440552 MGPP08493 103 aa8.86□□□□□ -0.99
PTPRN-205ENST00000440552 IGLC6P0CF74 106 aa8.86□□□□□ -0.99
PTPRN-205ENST00000440552 SULT1A2P50226 295 aa8.86□□□□□ -0.99
PTPRN-205ENST00000440552 NKX2-5P52952 324 aaPredicted RBP8.86□□□□□ -0.99
PTPRN-205ENST00000440552 RASL11AQ6T310 242 aa8.86□□□□□ -0.99
PTPRN-205ENST00000440552 REG3GQ6UW15 175 aa8.86□□□□□ -0.99
PTPRN-205ENST00000440552 PRSS3P2Q8NHM4 247 aa8.86□□□□□ -0.99
PTPRN-205ENST00000440552 MBD3L1Q8WWY6 194 aa8.86□□□□□ -0.99
PTPRN-205ENST00000440552 GAGE12HA6NDE8 117 aa8.85□□□□□ -0.99
PTPRN-205ENST00000440552 PFDN1O60925 122 aa8.85□□□□□ -0.99
PTPRN-205ENST00000440552 CACNG7P62955 275 aa8.85□□□□□ -0.99
PTPRN-205ENST00000440552 ODF1Q14990 250 aa8.85□□□□□ -0.99
PTPRN-205ENST00000440552 STPG4Q8N801 248 aa8.85□□□□□ -0.99
PTPRN-205ENST00000440552 NIT2Q9NQR4 276 aa8.85□□□□□ -0.99
PTPRN-205ENST00000440552 GVQW2A0A096LPI5 108 aaPredicted RBP8.84□□□□□ -0.99
PTPRN-205ENST00000440552 IGKV2-24A0A0C4DH68 120 aa8.84□□□□□ -0.99
PTPRN-205ENST00000440552 UBE2L6O14933 153 aa8.84□□□□□ -0.99
PTPRN-205ENST00000440552 RPS20P60866 119 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms