RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 CLPSL1A2RUU4 121 aa9.41□□□□□ -0.9
PCGF3-207ENST00000440452 OOSP1A8MZH6 123 aa9.41□□□□□ -0.9
PCGF3-207ENST00000440452 C9orf153Q5TBE3 101 aa9.41□□□□□ -0.9
PCGF3-207ENST00000440452 NRACQ8N912 160 aa9.41□□□□□ -0.9
PCGF3-207ENST00000440452 ID1P41134 155 aa9.41□□□□□ -0.9
PCGF3-207ENST00000440452 C20orf173Q96LM9 149 aa9.41□□□□□ -0.9
PCGF3-207ENST00000440452 A0A0J9YY99 117 aa9.4□□□□□ -0.9
PCGF3-207ENST00000440452 LINC01620Q4KN68 170 aa9.4□□□□□ -0.9
PCGF3-207ENST00000440452 KHDC1LQ5JSQ8 128 aa9.4□□□□□ -0.9
PCGF3-207ENST00000440452 MUSTN1Q8IVN3 82 aa9.4□□□□□ -0.9
PCGF3-207ENST00000440452 C5orf56Q8N8D9 126 aa9.4□□□□□ -0.9
PCGF3-207ENST00000440452 MOB4Q9Y3A3 225 aa9.4□□□□□ -0.9
PCGF3-207ENST00000440452 RHODO00212 210 aa9.4□□□□□ -0.9
PCGF3-207ENST00000440452 CCL19Q99731 98 aa9.4□□□□□ -0.9
PCGF3-207ENST00000440452 ZNF462Q96JM2 2506 aa9.4□□□□□ -0.91
PCGF3-207ENST00000440452 PMVKQ15126 192 aa9.39□□□□□ -0.91
PCGF3-207ENST00000440452 RNASE13Q5GAN3 156 aaKnown RBP9.39□□□□□ -0.91
PCGF3-207ENST00000440452 NOTCH2Q04721 2471 aa9.39□□□□□ -0.91
PCGF3-207ENST00000440452 TRAV12-2A0A075B6T6 113 aa9.39□□□□□ -0.91
PCGF3-207ENST00000440452 TRBV7-1A0A0A6YYK4 115 aa9.39□□□□□ -0.91
PCGF3-207ENST00000440452 HIST2H2BDQ6DRA6 164 aa9.39□□□□□ -0.91
PCGF3-207ENST00000440452 NEXN-AS1Q8NBZ9 246 aa9.39□□□□□ -0.91
PCGF3-207ENST00000440452 RHPN1-AS1Q9BWJ2 59 aa9.39□□□□□ -0.91
PCGF3-207ENST00000440452 JPT2Q9H910 190 aa9.39□□□□□ -0.91
PCGF3-207ENST00000440452 CFAP46Q8IYW2 2715 aa9.39□□□□□ -0.91
PCGF3-207ENST00000440452 FAM236AA0A1B0GUQ0 79 aa9.38□□□□□ -0.91
PCGF3-207ENST00000440452 FAM236BA0A1B0GV22 79 aa9.38□□□□□ -0.91
PCGF3-207ENST00000440452 RBAKDNA6NC62 111 aa9.38□□□□□ -0.91
PCGF3-207ENST00000440452 LINC00477Q96M19 166 aa9.38□□□□□ -0.91
PCGF3-207ENST00000440452 YAE1D1Q9NRH1 226 aa9.38□□□□□ -0.91
PCGF3-207ENST00000440452 ITPR1Q14643 2758 aa9.38□□□□□ -0.91
PCGF3-207ENST00000440452 UBE2D1P51668 147 aa9.38□□□□□ -0.91
PCGF3-207ENST00000440452 CLEC2BQ92478 149 aa9.38□□□□□ -0.91
PCGF3-207ENST00000440452 TRAV12-1A0A0B4J245 112 aa9.38□□□□□ -0.91
PCGF3-207ENST00000440452 CD7P09564 240 aa9.38□□□□□ -0.91
PCGF3-207ENST00000440452 PAPPA-AS1Q5QFB9 102 aa9.38□□□□□ -0.91
PCGF3-207ENST00000440452 TOMM6Q96B49 74 aa9.38□□□□□ -0.91
PCGF3-207ENST00000440452 C10orf99Q6UWK7 81 aa9.37□□□□□ -0.91
PCGF3-207ENST00000440452 UBE2D3P61077 147 aa9.37□□□□□ -0.91
PCGF3-207ENST00000440452 UBE2D2P62837 147 aa9.37□□□□□ -0.91
PCGF3-207ENST00000440452 PIMREGQ9BSJ6 248 aa9.37□□□□□ -0.91
PCGF3-207ENST00000440452 ANKRD17O75179 2603 aaKnown RBP9.37□□□□□ -0.91
PCGF3-207ENST00000440452 IGLV2-18A0A075B6J9 118 aa9.37□□□□□ -0.91
PCGF3-207ENST00000440452 IGHV1-69DA0A0B4J2H0 117 aa9.37□□□□□ -0.91
PCGF3-207ENST00000440452 IGHV1-69P01742 117 aa9.37□□□□□ -0.91
PCGF3-207ENST00000440452 EBI3Q14213 229 aa9.37□□□□□ -0.91
PCGF3-207ENST00000440452 ZNF625Q96I27 306 aaPredicted RBP9.36□□□□□ -0.91
PCGF3-207ENST00000440452 EPG5Q9HCE0 2579 aa9.36□□□□□ -0.91
PCGF3-207ENST00000440452 ABCA2Q9BZC7 2435 aa9.36□□□□□ -0.91
PCGF3-207ENST00000440452 TRAV21A0A0B4J279 112 aa9.36□□□□□ -0.91
PCGF3-207ENST00000440452 SDHAF1A6NFY7 115 aa9.36□□□□□ -0.91
PCGF3-207ENST00000440452 M0R2P5 195 aa9.36□□□□□ -0.91
PCGF3-207ENST00000440452 NHLRC4P0CG21 123 aaPredicted RBP9.36□□□□□ -0.91
PCGF3-207ENST00000440452 EDA2RQ9HAV5 297 aa9.36□□□□□ -0.91
PCGF3-207ENST00000440452 MTORP42345 2549 aa9.36□□□□□ -0.91
PCGF3-207ENST00000440452 IGHV4-30-2A0A087WSY4 118 aa9.36□□□□□ -0.91
PCGF3-207ENST00000440452 IGHV3-73A0A0B4J1V6 119 aa9.36□□□□□ -0.91
PCGF3-207ENST00000440452 TSPEAR-AS2P59090 65 aa9.36□□□□□ -0.91
PCGF3-207ENST00000440452 ITLN2Q8WWU7 325 aaPredicted RBP9.36□□□□□ -0.91
PCGF3-207ENST00000440452 DAND5Q8N907 189 aa9.35□□□□□ -0.91
PCGF3-207ENST00000440452 PPDPFQ9H3Y8 114 aa9.35□□□□□ -0.91
PCGF3-207ENST00000440452 JMJD1CQ15652 2540 aa9.35□□□□□ -0.91
PCGF3-207ENST00000440452 IGHV7-4-1A0A0J9YVY3 117 aa9.35□□□□□ -0.91
PCGF3-207ENST00000440452 C9orf139Q6ZV77 190 aa9.35□□□□□ -0.91
PCGF3-207ENST00000440452 IGHV3-30P01768 117 aa9.34□□□□□ -0.91
PCGF3-207ENST00000440452 IGHV3-30-5P0DP03 117 aa9.34□□□□□ -0.91
PCGF3-207ENST00000440452 KLK9Q9UKQ9 250 aa9.34□□□□□ -0.91
PCGF3-207ENST00000440452 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.34□□□□□ -0.91
PCGF3-207ENST00000440452 A0A0J9YXV3 536 aa9.34□□□□□ -0.91
PCGF3-207ENST00000440452 M0QXV9 152 aa9.34□□□□□ -0.91
PCGF3-207ENST00000440452 TMEM101Q96IK0 257 aa9.34□□□□□ -0.91
PCGF3-207ENST00000440452 DOPEY1Q5JWR5 2465 aa9.33□□□□□ -0.92
PCGF3-207ENST00000440452 TRGV11A0A075B6L2 103 aa9.33□□□□□ -0.92
PCGF3-207ENST00000440452 IGHV3-33P01772 117 aa9.33□□□□□ -0.92
PCGF3-207ENST00000440452 Q6ZSV7 163 aa9.33□□□□□ -0.92
PCGF3-207ENST00000440452 ELANEP08246 267 aa9.33□□□□□ -0.92
PCGF3-207ENST00000440452 ZNF575Q86XF7 245 aa9.33□□□□□ -0.92
PCGF3-207ENST00000440452 SLC25A29Q8N8R3 303 aa9.33□□□□□ -0.92
PCGF3-207ENST00000440452 FAM110AQ9BQ89 295 aa9.33□□□□□ -0.92
PCGF3-207ENST00000440452 VCYO14598 125 aa9.32□□□□□ -0.92
PCGF3-207ENST00000440452 ZNF580Q9UK33 172 aa9.32□□□□□ -0.92
PCGF3-207ENST00000440452 TRIAP1O43715 76 aa9.31□□□□□ -0.92
PCGF3-207ENST00000440452 CD28P10747 220 aa9.31□□□□□ -0.92
PCGF3-207ENST00000440452 SPINK13Q1W4C9 94 aa9.31□□□□□ -0.92
PCGF3-207ENST00000440452 ACANP16112 2415 aa9.31□□□□□ -0.92
PCGF3-207ENST00000440452 IGHV4-59P01825 116 aa9.31□□□□□ -0.92
PCGF3-207ENST00000440452 ZNF876PQ49A33 203 aa9.31□□□□□ -0.92
PCGF3-207ENST00000440452 CNFNQ9BYD5 112 aa9.31□□□□□ -0.92
PCGF3-207ENST00000440452 KLK5Q9Y337 293 aaPredicted RBP9.31□□□□□ -0.92
PCGF3-207ENST00000440452 PRRC2AP48634 2157 aaKnown RBP9.31□□□□□ -0.92
PCGF3-207ENST00000440452 PPP1R17O96001 155 aa9.31□□□□□ -0.92
PCGF3-207ENST00000440452 SYNJ2BPP57105 145 aa9.31□□□□□ -0.92
PCGF3-207ENST00000440452 C9orf47Q6ZRZ4 202 aa9.31□□□□□ -0.92
PCGF3-207ENST00000440452 C11orf44Q8N8P7 122 aa9.31□□□□□ -0.92
PCGF3-207ENST00000440452 FAM223BA6NKX1 122 aa9.3□□□□□ -0.92
PCGF3-207ENST00000440452 DGAT2L7PQ6IED9 249 aa9.3□□□□□ -0.92
PCGF3-207ENST00000440452 FAM223AQ8IWN6 122 aa9.3□□□□□ -0.92
PCGF3-207ENST00000440452 TIMM21Q9BVV7 248 aa9.3□□□□□ -0.92
PCGF3-207ENST00000440452 TRBV10-2A0A0K0K1G8 114 aa9.3□□□□□ -0.92
PCGF3-207ENST00000440452 LOC107984640A0A0U1RRK4 108 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms