RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 NKX6-2Q9C056 277 aaPredicted RBP13.02□□□□□ -0.33
TRIM39-210ENST00000440271 VAX2Q9UIW0 290 aa13.02□□□□□ -0.33
TRIM39-210ENST00000440271 FAM74A7A6NL05 159 aa13.01□□□□□ -0.33
TRIM39-210ENST00000440271 REG3AQ06141 175 aa13.01□□□□□ -0.33
TRIM39-210ENST00000440271 ZNF726P1Q15940 193 aa13.01□□□□□ -0.33
TRIM39-210ENST00000440271 DERL1Q9BUN8 251 aa13.01□□□□□ -0.33
TRIM39-210ENST00000440271 AP5S1Q9NUS5 200 aa13.01□□□□□ -0.33
TRIM39-210ENST00000440271 TRAV16A0A0A6YYK6 109 aaPredicted RBP13□□□□□ -0.33
TRIM39-210ENST00000440271 TRBV6-1A0A0K0K1D8 114 aa13□□□□□ -0.33
TRIM39-210ENST00000440271 UBE2G1P62253 170 aa13□□□□□ -0.33
TRIM39-210ENST00000440271 OR10AG1Q8NH19 301 aa13□□□□□ -0.33
TRIM39-210ENST00000440271 C7orf33Q8WU49 177 aa13□□□□□ -0.33
TRIM39-210ENST00000440271 FMC1Q96HJ9 113 aa13□□□□□ -0.33
TRIM39-210ENST00000440271 PLAC8Q9NZF1 115 aa13□□□□□ -0.33
TRIM39-210ENST00000440271 TRBV25-1A0A075B6N4 114 aa12.99□□□□□ -0.33
TRIM39-210ENST00000440271 F5H697 171 aa12.99□□□□□ -0.33
TRIM39-210ENST00000440271 AQP10Q96PS8 301 aa12.98□□□□□ -0.33
TRIM39-210ENST00000440271 ZNF471Q9BX82 626 aaPredicted RBP12.98□□□□□ -0.33
TRIM39-210ENST00000440271 KIF25-AS1Q9Y6Z4 181 aa12.98□□□□□ -0.33
TRIM39-210ENST00000440271 TRAV8-4A0A0B4J246 113 aa12.97□□□□□ -0.33
TRIM39-210ENST00000440271 CTXND1A0A1B0GTU2 59 aa12.97□□□□□ -0.33
TRIM39-210ENST00000440271 A6NHS1 94 aa12.97□□□□□ -0.33
TRIM39-210ENST00000440271 LTAP01374 205 aa12.97□□□□□ -0.33
TRIM39-210ENST00000440271 P01737 135 aa12.97□□□□□ -0.33
TRIM39-210ENST00000440271 IQCJQ1A5X6 159 aa12.96□□□□□ -0.33
TRIM39-210ENST00000440271 RAB5CP51148 216 aa12.95□□□□□ -0.34
TRIM39-210ENST00000440271 C20orf203Q8NBC4 194 aa12.95□□□□□ -0.34
TRIM39-210ENST00000440271 GTSF1Q8WW33 167 aa12.95□□□□□ -0.34
TRIM39-210ENST00000440271 IGHV1-24A0A0C4DH33 117 aa12.94□□□□□ -0.34
TRIM39-210ENST00000440271 MUC21A0A0G2JKD1 596 aa12.94□□□□□ -0.34
TRIM39-210ENST00000440271 A0A0J9YXV3 536 aa12.94□□□□□ -0.34
TRIM39-210ENST00000440271 MUC21A0A140T8X8 626 aa12.94□□□□□ -0.34
TRIM39-210ENST00000440271 KRTAP10-8P60410 259 aa12.94□□□□□ -0.34
TRIM39-210ENST00000440271 WDR73Q6P4I2 378 aa12.94□□□□□ -0.34
TRIM39-210ENST00000440271 SSBP4Q9BWG4 385 aaPredicted RBP12.94□□□□□ -0.34
TRIM39-210ENST00000440271 SNAI2O43623 268 aa12.93□□□□□ -0.34
TRIM39-210ENST00000440271 GZMBP10144 247 aa12.93□□□□□ -0.34
TRIM39-210ENST00000440271 PRR3P79522 188 aaKnown RBP12.93□□□□□ -0.34
TRIM39-210ENST00000440271 SPANXN1Q5VSR9 72 aa12.93□□□□□ -0.34
TRIM39-210ENST00000440271 CXCL1P09341 107 aa12.92□□□□□ -0.34
TRIM39-210ENST00000440271 DEFA3P59666 94 aa12.92□□□□□ -0.34
TRIM39-210ENST00000440271 SSTP61278 116 aa12.92□□□□□ -0.34
TRIM39-210ENST00000440271 COX6A2Q02221 97 aa12.92□□□□□ -0.34
TRIM39-210ENST00000440271 RPL7L1Q6DKI1 246 aaKnown RBP12.92□□□□□ -0.34
TRIM39-210ENST00000440271 GFRA4Q9GZZ7 299 aa12.92□□□□□ -0.34
TRIM39-210ENST00000440271 IGLV4-60A0A075B6I1 120 aa12.91□□□□□ -0.34
TRIM39-210ENST00000440271 GAS8-AS1O95177 125 aa12.91□□□□□ -0.34
TRIM39-210ENST00000440271 MAJINQ3KP22 176 aa12.91□□□□□ -0.34
TRIM39-210ENST00000440271 TCEAL7Q9BRU2 100 aa12.91□□□□□ -0.34
TRIM39-210ENST00000440271 A0A1B0GUV1 79 aa12.9□□□□□ -0.34
TRIM39-210ENST00000440271 OR5AL1P0C617 328 aa12.9□□□□□ -0.34
TRIM39-210ENST00000440271 SMIM17P0DL12 118 aa12.9□□□□□ -0.34
TRIM39-210ENST00000440271 AKR1C3P42330 323 aa12.9□□□□□ -0.34
TRIM39-210ENST00000440271 FHITP49789 147 aa12.89□□□□□ -0.35
TRIM39-210ENST00000440271 CST9LP1Q5W188 147 aa12.89□□□□□ -0.35
TRIM39-210ENST00000440271 PRSS3P2Q8NHM4 247 aa12.89□□□□□ -0.35
TRIM39-210ENST00000440271 BORCS7-ASMTA0A0B4J1R7 106 aa12.88□□□□□ -0.35
TRIM39-210ENST00000440271 NDUFS6O75380 124 aaKnown RBP12.88□□□□□ -0.35
TRIM39-210ENST00000440271 RPS10P46783 165 aaKnown RBP12.88□□□□□ -0.35
TRIM39-210ENST00000440271 Q5BKY6 102 aa12.88□□□□□ -0.35
TRIM39-210ENST00000440271 AKR1C8PQ5T2L2 129 aa12.88□□□□□ -0.35
TRIM39-210ENST00000440271 C15orf56Q8N910 161 aa12.88□□□□□ -0.35
TRIM39-210ENST00000440271 LYPD6BQ8NI32 183 aa12.88□□□□□ -0.35
TRIM39-210ENST00000440271 IGKV2-24A0A0C4DH68 120 aa12.87□□□□□ -0.35
TRIM39-210ENST00000440271 MAP1LC3B2A6NCE7 125 aa12.87□□□□□ -0.35
TRIM39-210ENST00000440271 M0QY20 66 aa12.87□□□□□ -0.35
TRIM39-210ENST00000440271 DEFA1P59665 94 aa12.87□□□□□ -0.35
TRIM39-210ENST00000440271 REG3GQ6UW15 175 aa12.87□□□□□ -0.35
TRIM39-210ENST00000440271 SPINK6Q6UWN8 80 aa12.87□□□□□ -0.35
TRIM39-210ENST00000440271 STPG4Q8N801 248 aa12.87□□□□□ -0.35
TRIM39-210ENST00000440271 STOML3Q8TAV4 291 aa12.87□□□□□ -0.35
TRIM39-210ENST00000440271 TMEM243Q9BU79 118 aa12.87□□□□□ -0.35
TRIM39-210ENST00000440271 MAP1LC3BQ9GZQ8 125 aa12.87□□□□□ -0.35
TRIM39-210ENST00000440271 CFAP161Q6P656 301 aa12.86□□□□□ -0.35
TRIM39-210ENST00000440271 AP1S3Q96PC3 154 aa12.86□□□□□ -0.35
TRIM39-210ENST00000440271 ALG5Q9Y673 324 aa12.86□□□□□ -0.35
TRIM39-210ENST00000440271 INO80EQ8NBZ0 244 aaPredicted RBP12.85□□□□□ -0.35
TRIM39-210ENST00000440271 MLST8Q9BVC4 326 aa12.85□□□□□ -0.35
TRIM39-210ENST00000440271 GAGE12HA6NDE8 117 aa12.84□□□□□ -0.35
TRIM39-210ENST00000440271 S100A9P06702 114 aaKnown RBP12.84□□□□□ -0.35
TRIM39-210ENST00000440271 SULT1A2P50226 295 aa12.84□□□□□ -0.35
TRIM39-210ENST00000440271 H7C1H1 209 aa12.83□□□□□ -0.36
TRIM39-210ENST00000440271 MGPP08493 103 aa12.83□□□□□ -0.36
TRIM39-210ENST00000440271 NKX2-5P52952 324 aaPredicted RBP12.83□□□□□ -0.36
TRIM39-210ENST00000440271 HIGD2BQ4VC39 106 aa12.83□□□□□ -0.36
TRIM39-210ENST00000440271 BAGE2Q86Y30 109 aa12.83□□□□□ -0.36
TRIM39-210ENST00000440271 PAGE4O60829 102 aa12.82□□□□□ -0.36
TRIM39-210ENST00000440271 SRSF9Q13242 221 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRIM39-210ENST00000440271 SUMO4Q6EEV6 95 aa12.82□□□□□ -0.36
TRIM39-210ENST00000440271 A0A096LNI7 61 aa12.8□□□□□ -0.36
TRIM39-210ENST00000440271 UBE2L6O14933 153 aa12.8□□□□□ -0.36
TRIM39-210ENST00000440271 PGLYRP4Q96LB8 373 aa12.8□□□□□ -0.36
TRIM39-210ENST00000440271 IGKV3OR2-268A0A0C4DH90 116 aa12.79□□□□□ -0.36
TRIM39-210ENST00000440271 MED28Q9H204 178 aa12.79□□□□□ -0.36
TRIM39-210ENST00000440271 SCO2A0A1W2PP80 73 aa12.78□□□□□ -0.36
TRIM39-210ENST00000440271 RASL11AQ6T310 242 aa12.78□□□□□ -0.36
TRIM39-210ENST00000440271 FXYD6-FXYD2A0A087WZ82 144 aa12.77□□□□□ -0.37
TRIM39-210ENST00000440271 TPPP3Q9BW30 176 aa12.77□□□□□ -0.37
TRIM39-210ENST00000440271 NIT2Q9NQR4 276 aa12.77□□□□□ -0.37
TRIM39-210ENST00000440271 LINC00474Q9P2X8 69 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms