RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 NEXN-AS1Q8NBZ9 246 aa12.46□□□□□ -0.41
CCDC78-204ENST00000439619 BAALCQ8WXS3 180 aa12.46□□□□□ -0.41
CCDC78-204ENST00000439619 BIN3Q9NQY0 253 aa12.46□□□□□ -0.41
CCDC78-204ENST00000439619 SULT1A2P50226 295 aa12.45□□□□□ -0.42
CCDC78-204ENST00000439619 MEF2BQ02080 365 aaPredicted RBP12.45□□□□□ -0.42
CCDC78-204ENST00000439619 DERL1Q9BUN8 251 aa12.45□□□□□ -0.42
CCDC78-204ENST00000439619 TPPP3Q9BW30 176 aa12.45□□□□□ -0.42
CCDC78-204ENST00000439619 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.44□□□□□ -0.42
CCDC78-204ENST00000439619 H7C1H1 209 aa12.44□□□□□ -0.42
CCDC78-204ENST00000439619 FER1L6-AS1Q8NA97 138 aa12.44□□□□□ -0.42
CCDC78-204ENST00000439619 OR2D3Q8NGH3 330 aa12.44□□□□□ -0.42
CCDC78-204ENST00000439619 CHCHD5Q9BSY4 110 aa12.44□□□□□ -0.42
CCDC78-204ENST00000439619 C1orf43Q9BWL3 253 aa12.44□□□□□ -0.42
CCDC78-204ENST00000439619 TAGLN2P37802 199 aaKnown RBP12.43□□□□□ -0.42
CCDC78-204ENST00000439619 CACNG7P62955 275 aa12.43□□□□□ -0.42
CCDC78-204ENST00000439619 WFDC2Q14508 124 aa12.43□□□□□ -0.42
CCDC78-204ENST00000439619 TCTE3Q8IZS6 198 aa12.43□□□□□ -0.42
CCDC78-204ENST00000439619 MED9Q9NWA0 146 aa12.43□□□□□ -0.42
CCDC78-204ENST00000439619 F2Z2F3 143 aa12.42□□□□□ -0.42
CCDC78-204ENST00000439619 P01737 135 aa12.42□□□□□ -0.42
CCDC78-204ENST00000439619 C14orf177Q52M58 125 aa12.42□□□□□ -0.42
CCDC78-204ENST00000439619 SLC51BQ86UW2 128 aa12.42□□□□□ -0.42
CCDC78-204ENST00000439619 ANGP03950 147 aaKnown RBP12.41□□□□□ -0.42
CCDC78-204ENST00000439619 HAMPP81172 84 aa12.41□□□□□ -0.42
CCDC78-204ENST00000439619 ATRAIDQ6UW56 229 aa12.41□□□□□ -0.42
CCDC78-204ENST00000439619 C15orf54Q8N8G6 183 aa12.41□□□□□ -0.42
CCDC78-204ENST00000439619 RAB19A4D1S5 217 aa12.4□□□□□ -0.42
CCDC78-204ENST00000439619 MGPP08493 103 aa12.4□□□□□ -0.42
CCDC78-204ENST00000439619 BCL2P10415 239 aa12.4□□□□□ -0.42
CCDC78-204ENST00000439619 DNAJC30Q96LL9 226 aa12.4□□□□□ -0.42
CCDC78-204ENST00000439619 VAX2Q9UIW0 290 aa12.4□□□□□ -0.42
CCDC78-204ENST00000439619 TRBV25-1A0A075B6N4 114 aa12.39□□□□□ -0.43
CCDC78-204ENST00000439619 TRGC1P0CF51 173 aa12.39□□□□□ -0.43
CCDC78-204ENST00000439619 IGLC6P0CF74 106 aa12.39□□□□□ -0.43
CCDC78-204ENST00000439619 GZMBP10144 247 aa12.39□□□□□ -0.43
CCDC78-204ENST00000439619 KIF25-AS1Q9Y6Z4 181 aa12.39□□□□□ -0.43
CCDC78-204ENST00000439619 C19orf71A6NCJ1 209 aa12.38□□□□□ -0.43
CCDC78-204ENST00000439619 IGLV2-8P01709 118 aa12.38□□□□□ -0.43
CCDC78-204ENST00000439619 MIAQ16674 131 aa12.38□□□□□ -0.43
CCDC78-204ENST00000439619 MPV17L2Q567V2 206 aa12.38□□□□□ -0.43
CCDC78-204ENST00000439619 FAM30AQ9NZY2 134 aa12.38□□□□□ -0.43
CCDC78-204ENST00000439619 PLA2G1BP04054 148 aaKnown RBP12.37□□□□□ -0.43
CCDC78-204ENST00000439619 IGHV1-24A0A0C4DH33 117 aa12.36□□□□□ -0.43
CCDC78-204ENST00000439619 ENHOQ6UWT2 76 aa12.36□□□□□ -0.43
CCDC78-204ENST00000439619 Q6ZSA8 131 aa12.36□□□□□ -0.43
CCDC78-204ENST00000439619 M0QY20 66 aa12.35□□□□□ -0.43
CCDC78-204ENST00000439619 GAGE6Q13070 117 aa12.34□□□□□ -0.43
CCDC78-204ENST00000439619 IQCJQ1A5X6 159 aa12.34□□□□□ -0.43
CCDC78-204ENST00000439619 SUMO4Q6EEV6 95 aa12.34□□□□□ -0.43
CCDC78-204ENST00000439619 RASL11AQ6T310 242 aa12.34□□□□□ -0.43
CCDC78-204ENST00000439619 LYZL1Q6UWQ5 148 aa12.34□□□□□ -0.43
CCDC78-204ENST00000439619 NTM-AS1Q6ZSK4 140 aa12.34□□□□□ -0.43
CCDC78-204ENST00000439619 DPH3P1Q9H4G8 78 aa12.34□□□□□ -0.43
CCDC78-204ENST00000439619 TRBV20OR9-2A0A075B6H5 130 aa12.33□□□□□ -0.44
CCDC78-204ENST00000439619 HLA-DQA1P01909 254 aa12.33□□□□□ -0.44
CCDC78-204ENST00000439619 NTF3P20783 257 aa12.33□□□□□ -0.44
CCDC78-204ENST00000439619 RBX1P62877 108 aa12.33□□□□□ -0.44
CCDC78-204ENST00000439619 WDR73Q6P4I2 378 aa12.33□□□□□ -0.44
CCDC78-204ENST00000439619 AKAP14Q86UN6 197 aa12.33□□□□□ -0.44
CCDC78-204ENST00000439619 C9orf62Q8N4C0 152 aa12.33□□□□□ -0.44
CCDC78-204ENST00000439619 NUDT10Q8NFP7 164 aa12.32□□□□□ -0.44
CCDC78-204ENST00000439619 NUDT11Q96G61 164 aa12.32□□□□□ -0.44
CCDC78-204ENST00000439619 NIT2Q9NQR4 276 aa12.32□□□□□ -0.44
CCDC78-204ENST00000439619 NKX2-5P52952 324 aaPredicted RBP12.31□□□□□ -0.44
CCDC78-204ENST00000439619 BLOC1S1P78537 153 aa12.31□□□□□ -0.44
CCDC78-204ENST00000439619 TWIST1Q15672 202 aa12.31□□□□□ -0.44
CCDC78-204ENST00000439619 LINC01620Q4KN68 170 aa12.31□□□□□ -0.44
CCDC78-204ENST00000439619 SMIM15Q7Z3B0 74 aa12.31□□□□□ -0.44
CCDC78-204ENST00000439619 LINC00528Q8N1L1 170 aa12.31□□□□□ -0.44
CCDC78-204ENST00000439619 LINC00269Q8N2A0 174 aa12.31□□□□□ -0.44
CCDC78-204ENST00000439619 RPP21Q9H633 154 aaKnown RBP12.31□□□□□ -0.44
CCDC78-204ENST00000439619 CTRLP40313 264 aa12.3□□□□□ -0.44
CCDC78-204ENST00000439619 TMEM243Q9BU79 118 aa12.3□□□□□ -0.44
CCDC78-204ENST00000439619 PRR34Q9NV39 138 aa12.3□□□□□ -0.44
CCDC78-204ENST00000439619 SRRM2Q9UQ35 2752 aaKnown RBP12.3□□□□□ -0.44
CCDC78-204ENST00000439619 USP17L23D6RBM5 183 aa12.29□□□□□ -0.44
CCDC78-204ENST00000439619 UBE2L6O14933 153 aa12.29□□□□□ -0.44
CCDC78-204ENST00000439619 CLPSL2Q6UWE3 100 aa12.29□□□□□ -0.44
CCDC78-204ENST00000439619 Q6ZNX1 250 aa12.29□□□□□ -0.44
CCDC78-204ENST00000439619 PGLYRP4Q96LB8 373 aa12.29□□□□□ -0.44
CCDC78-204ENST00000439619 CHAC1Q9BUX1 264 aa12.29□□□□□ -0.44
CCDC78-204ENST00000439619 COTL1Q14019 142 aa12.28□□□□□ -0.44
CCDC78-204ENST00000439619 SCXQ7RTU7 201 aa12.28□□□□□ -0.44
CCDC78-204ENST00000439619 TRAV8-4A0A0B4J246 113 aa12.27□□□□□ -0.45
CCDC78-204ENST00000439619 TMEM250H0YL14 139 aa12.27□□□□□ -0.45
CCDC78-204ENST00000439619 REG3AQ06141 175 aa12.27□□□□□ -0.45
CCDC78-204ENST00000439619 DGAT2L7PQ6IED9 249 aa12.27□□□□□ -0.45
CCDC78-204ENST00000439619 OCC1Q8TAD7 63 aa12.27□□□□□ -0.45
CCDC78-204ENST00000439619 CNFNQ9BYD5 112 aa12.27□□□□□ -0.45
CCDC78-204ENST00000439619 RNASE7Q9H1E1 156 aaKnown RBP12.27□□□□□ -0.45
CCDC78-204ENST00000439619 FAT1Q14517 4588 aa12.26□□□□□ -0.45
CCDC78-204ENST00000439619 A0A1B0GUV1 79 aa12.26□□□□□ -0.45
CCDC78-204ENST00000439619 AMTP48728 403 aa12.26□□□□□ -0.45
CCDC78-204ENST00000439619 CLRN3Q8NCR9 226 aa12.26□□□□□ -0.45
CCDC78-204ENST00000439619 TEX261Q6UWH6 196 aa12.25□□□□□ -0.45
CCDC78-204ENST00000439619 ALKAL2Q6UX46 152 aa12.25□□□□□ -0.45
CCDC78-204ENST00000439619 GATCO43716 136 aaKnown RBP12.24□□□□□ -0.45
CCDC78-204ENST00000439619 DEFB104AQ8WTQ1 72 aa12.24□□□□□ -0.45
CCDC78-204ENST00000439619 BORCS7Q96B45 105 aa12.24□□□□□ -0.45
CCDC78-204ENST00000439619 DMBT1Q9UGM3 2413 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms