RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 K7EQG2 157 aa11.37□□□□□ -0.59
APP-208ENST00000439274 CFAP126Q5VTH2 177 aa11.37□□□□□ -0.59
APP-208ENST00000439274 SYT8Q8NBV8 401 aa11.37□□□□□ -0.59
APP-208ENST00000439274 ZNF418Q8TF45 676 aaPredicted RBP11.37□□□□□ -0.59
APP-208ENST00000439274 TGFAP01135 160 aa11.36□□□□□ -0.59
APP-208ENST00000439274 CREBBPQ92793 2442 aa11.36□□□□□ -0.59
APP-208ENST00000439274 ZNF462Q96JM2 2506 aa11.36□□□□□ -0.59
APP-208ENST00000439274 B4DSR2 109 aa11.36□□□□□ -0.59
APP-208ENST00000439274 CFC1BP0CG36 223 aa11.36□□□□□ -0.59
APP-208ENST00000439274 CFC1P0CG37 223 aa11.36□□□□□ -0.59
APP-208ENST00000439274 SLC25A29Q8N8R3 303 aa11.36□□□□□ -0.59
APP-208ENST00000439274 USP9YO00507 2555 aaPredicted RBP11.36□□□□□ -0.59
APP-208ENST00000439274 UBE2D3P61077 147 aa11.35□□□□□ -0.59
APP-208ENST00000439274 UBE2D2P62837 147 aa11.35□□□□□ -0.59
APP-208ENST00000439274 PTH2Q96A98 100 aa11.35□□□□□ -0.59
APP-208ENST00000439274 ODF3Q96PU9 254 aa11.35□□□□□ -0.59
APP-208ENST00000439274 UBR5O95071 2799 aaPredicted RBP11.35□□□□□ -0.59
APP-208ENST00000439274 HTN1P15515 57 aa11.35□□□□□ -0.59
APP-208ENST00000439274 LGALS3P17931 250 aaKnown RBP11.35□□□□□ -0.59
APP-208ENST00000439274 MAPK1IP1LQ8NDC0 245 aa11.35□□□□□ -0.59
APP-208ENST00000439274 SPATA25Q9BR10 227 aa11.35□□□□□ -0.59
APP-208ENST00000439274 IGHV3-73A0A0B4J1V6 119 aa11.34□□□□□ -0.59
APP-208ENST00000439274 NSUN5P1Q3KNT7 163 aa11.34□□□□□ -0.59
APP-208ENST00000439274 TRPT1Q86TN4 253 aaKnown RBP11.34□□□□□ -0.59
APP-208ENST00000439274 NFE4Q86UQ8 179 aa11.34□□□□□ -0.59
APP-208ENST00000439274 ZNF580Q9UK33 172 aa11.34□□□□□ -0.59
APP-208ENST00000439274 EPG5Q9HCE0 2579 aa11.34□□□□□ -0.59
APP-208ENST00000439274 POLQO75417 2590 aa11.33□□□□□ -0.6
APP-208ENST00000439274 TCL1BO95988 128 aa11.33□□□□□ -0.6
APP-208ENST00000439274 RBMY1A1P0DJD3 496 aaKnown RBP11.33□□□□□ -0.6
APP-208ENST00000439274 RBMY1CP0DJD4 496 aa11.33□□□□□ -0.6
APP-208ENST00000439274 RBMY1FQ15415 496 aaKnown RBP11.33□□□□□ -0.6
APP-208ENST00000439274 PRM2P04554 102 aa11.33□□□□□ -0.6
APP-208ENST00000439274 FOXI1Q12951 378 aa11.33□□□□□ -0.6
APP-208ENST00000439274 RHOHQ15669 191 aa11.33□□□□□ -0.6
APP-208ENST00000439274 C20orf203Q8NBC4 194 aa11.33□□□□□ -0.6
APP-208ENST00000439274 C1QTNF4Q9BXJ3 329 aa11.33□□□□□ -0.6
APP-208ENST00000439274 A0A0J9YXV3 536 aa11.32□□□□□ -0.6
APP-208ENST00000439274 TMEM223A0PJW6 202 aa11.32□□□□□ -0.6
APP-208ENST00000439274 PROK1P58294 105 aa11.32□□□□□ -0.6
APP-208ENST00000439274 ZNF22P17026 224 aaPredicted RBP11.32□□□□□ -0.6
APP-208ENST00000439274 KNCNA6PVL3 124 aa11.31□□□□□ -0.6
APP-208ENST00000439274 I3L3M4 83 aa11.31□□□□□ -0.6
APP-208ENST00000439274 MXRA5Q9NR99 2828 aa11.31□□□□□ -0.6
APP-208ENST00000439274 IGLV4-3A0A075B6K6 122 aa11.31□□□□□ -0.6
APP-208ENST00000439274 EIF4EBP3O60516 100 aaPredicted RBP11.31□□□□□ -0.6
APP-208ENST00000439274 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
APP-208ENST00000439274 C10orf126Q8N4M7 172 aa11.31□□□□□ -0.6
APP-208ENST00000439274 RHODO00212 210 aa11.3□□□□□ -0.6
APP-208ENST00000439274 LEPROTO15243 131 aa11.3□□□□□ -0.6
APP-208ENST00000439274 CENPEQ02224 2701 aa11.3□□□□□ -0.6
APP-208ENST00000439274 TRAV2A0A0B4J234 112 aa11.3□□□□□ -0.6
APP-208ENST00000439274 A4D1N5 150 aa11.3□□□□□ -0.6
APP-208ENST00000439274 RAX2Q96IS3 184 aa11.3□□□□□ -0.6
APP-208ENST00000439274 CEMP1Q6PRD7 247 aaPredicted RBP11.29□□□□□ -0.6
APP-208ENST00000439274 VCX2Q9H322 139 aa11.29□□□□□ -0.6
APP-208ENST00000439274 Q9UF83 564 aa11.29□□□□□ -0.6
APP-208ENST00000439274 PRO1854Q9UHT4 67 aa11.29□□□□□ -0.6
APP-208ENST00000439274 MYO18BQ8IUG5 2567 aa11.29□□□□□ -0.6
APP-208ENST00000439274 ADARB2-AS1A8MUL3 147 aa11.29□□□□□ -0.6
APP-208ENST00000439274 H7C2G1 150 aa11.29□□□□□ -0.6
APP-208ENST00000439274 RNASE13Q5GAN3 156 aaKnown RBP11.29□□□□□ -0.6
APP-208ENST00000439274 SCGB1C2P0DMR2 95 aa11.28□□□□□ -0.6
APP-208ENST00000439274 FHL3Q13643 280 aa11.28□□□□□ -0.6
APP-208ENST00000439274 DEFB136Q30KP8 78 aa11.28□□□□□ -0.6
APP-208ENST00000439274 C18orf65Q6ZTR6 163 aa11.28□□□□□ -0.6
APP-208ENST00000439274 ATP6V0E2Q8NHE4 81 aa11.28□□□□□ -0.6
APP-208ENST00000439274 CARD19Q96LW7 228 aa11.28□□□□□ -0.6
APP-208ENST00000439274 TRGV11A0A075B6L2 103 aa11.27□□□□□ -0.61
APP-208ENST00000439274 SCGB1A1P11684 91 aa11.27□□□□□ -0.61
APP-208ENST00000439274 TCTEX1D4Q5JR98 221 aa11.27□□□□□ -0.61
APP-208ENST00000439274 MUSTN1Q8IVN3 82 aa11.27□□□□□ -0.61
APP-208ENST00000439274 FAM104AQ969W3 186 aa11.27□□□□□ -0.61
APP-208ENST00000439274 ANKRD17O75179 2603 aaKnown RBP11.27□□□□□ -0.61
APP-208ENST00000439274 FBN2P35556 2912 aa11.27□□□□□ -0.61
APP-208ENST00000439274 LYRM7Q5U5X0 104 aa11.27□□□□□ -0.61
APP-208ENST00000439274 LINC01356Q8N9X3 169 aa11.27□□□□□ -0.61
APP-208ENST00000439274 SPXQ9BT56 116 aa11.27□□□□□ -0.61
APP-208ENST00000439274 CDIP1Q9H305 208 aa11.27□□□□□ -0.61
APP-208ENST00000439274 TMEM89A2RUT3 159 aa11.26□□□□□ -0.61
APP-208ENST00000439274 GATA3P23771 443 aa11.26□□□□□ -0.61
APP-208ENST00000439274 SLURP1P55000 103 aa11.26□□□□□ -0.61
APP-208ENST00000439274 DEFB131AP59861 70 aa11.26□□□□□ -0.61
APP-208ENST00000439274 CD28P10747 220 aa11.26□□□□□ -0.61
APP-208ENST00000439274 TMEM263Q8WUH6 116 aaKnown RBP11.25□□□□□ -0.61
APP-208ENST00000439274 ZNF702PQ9H963 129 aa11.25□□□□□ -0.61
APP-208ENST00000439274 TRAV8-3A0A0A6YYJ7 113 aa11.25□□□□□ -0.61
APP-208ENST00000439274 RBMY1BA6NDE4 496 aaKnown RBP11.25□□□□□ -0.61
APP-208ENST00000439274 RBMY1EA6NEQ0 496 aaKnown RBP11.25□□□□□ -0.61
APP-208ENST00000439274 RBMY1DP0C7P1 496 aaKnown RBP11.25□□□□□ -0.61
APP-208ENST00000439274 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
APP-208ENST00000439274 Q6ZSN1 163 aa11.25□□□□□ -0.61
APP-208ENST00000439274 BEX4Q9NWD9 120 aaPredicted RBP11.25□□□□□ -0.61
APP-208ENST00000439274 TRBV20-1A0A075B6N2 111 aa11.24□□□□□ -0.61
APP-208ENST00000439274 IGHV3-33P01772 117 aa11.24□□□□□ -0.61
APP-208ENST00000439274 TEN1Q86WV5 123 aa11.24□□□□□ -0.61
APP-208ENST00000439274 VPREB3Q9UKI3 123 aa11.24□□□□□ -0.61
APP-208ENST00000439274 KMT2BQ9UMN6 2715 aaPredicted RBP11.24□□□□□ -0.61
APP-208ENST00000439274 A0A0J9YXY3 114 aa11.24□□□□□ -0.61
APP-208ENST00000439274 IGHV3-30-3P0DP02 117 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms