RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 CDSNQ15517 529 aa12□□□□□ -0.49
DHFR-201ENST00000439211 TOMM6Q96B49 74 aa12□□□□□ -0.49
DHFR-201ENST00000439211 USP9YO00507 2555 aaPredicted RBP11.99□□□□□ -0.49
DHFR-201ENST00000439211 A0A1B0GX51 115 aa11.99□□□□□ -0.49
DHFR-201ENST00000439211 COX7CP15954 63 aa11.99□□□□□ -0.49
DHFR-201ENST00000439211 Q8N9W7 124 aa11.99□□□□□ -0.49
DHFR-201ENST00000439211 LY6G5BQ8NDX9 201 aa11.99□□□□□ -0.49
DHFR-201ENST00000439211 ICOSQ9Y6W8 199 aa11.99□□□□□ -0.49
DHFR-201ENST00000439211 IGKV3-20P01619 116 aa11.99□□□□□ -0.49
DHFR-201ENST00000439211 RNASE4P34096 147 aaKnown RBP11.99□□□□□ -0.49
DHFR-201ENST00000439211 C4orf26Q17RF5 130 aa11.99□□□□□ -0.49
DHFR-201ENST00000439211 SMAD5-AS1Q9Y6J3 95 aa11.99□□□□□ -0.49
DHFR-201ENST00000439211 BUB3O43684 328 aa11.98□□□□□ -0.49
DHFR-201ENST00000439211 P0DMU3 169 aa11.98□□□□□ -0.49
DHFR-201ENST00000439211 FAM231AP0DMU4 169 aa11.98□□□□□ -0.49
DHFR-201ENST00000439211 FAM231CP0DMU5 169 aa11.98□□□□□ -0.49
DHFR-201ENST00000439211 HOXB4P17483 251 aaPredicted RBP11.98□□□□□ -0.49
DHFR-201ENST00000439211 RNF152Q8N8N0 203 aa11.98□□□□□ -0.49
DHFR-201ENST00000439211 ABCA2Q9BZC7 2435 aa11.98□□□□□ -0.49
DHFR-201ENST00000439211 DEFB1P60022 68 aa11.98□□□□□ -0.49
DHFR-201ENST00000439211 FAM110DQ8TAY7 271 aaPredicted RBP11.98□□□□□ -0.49
DHFR-201ENST00000439211 TMEM190Q8WZ59 177 aa11.98□□□□□ -0.49
DHFR-201ENST00000439211 UBE2E1P51965 193 aa11.98□□□□□ -0.49
DHFR-201ENST00000439211 LINC00643Q86TS7 51 aa11.98□□□□□ -0.49
DHFR-201ENST00000439211 SPANXCQ9NY87 97 aa11.98□□□□□ -0.49
DHFR-201ENST00000439211 CCDC168Q8NDH2 2452 aa11.98□□□□□ -0.49
DHFR-201ENST00000439211 ATOX1O00244 68 aa11.97□□□□□ -0.49
DHFR-201ENST00000439211 H7C423 109 aa11.97□□□□□ -0.49
DHFR-201ENST00000439211 ELANEP08246 267 aa11.97□□□□□ -0.49
DHFR-201ENST00000439211 SPANXDQ9BXN6 97 aa11.97□□□□□ -0.49
DHFR-201ENST00000439211 RHOHQ15669 191 aa11.97□□□□□ -0.49
DHFR-201ENST00000439211 NSUN5P1Q3KNT7 163 aa11.97□□□□□ -0.49
DHFR-201ENST00000439211 ACYP1P07311 99 aa11.96□□□□□ -0.49
DHFR-201ENST00000439211 FAM74A4Q5TZK3 123 aa11.96□□□□□ -0.49
DHFR-201ENST00000439211 NRACQ8N912 160 aa11.96□□□□□ -0.49
DHFR-201ENST00000439211 MSRB2Q9Y3D2 182 aa11.96□□□□□ -0.49
DHFR-201ENST00000439211 A0A0U1RRA0 63 aa11.96□□□□□ -0.49
DHFR-201ENST00000439211 OVOL3O00110 214 aa11.96□□□□□ -0.49
DHFR-201ENST00000439211 HTN1P15515 57 aa11.96□□□□□ -0.49
DHFR-201ENST00000439211 DPH3P1Q9H4G8 78 aa11.96□□□□□ -0.49
DHFR-201ENST00000439211 PEMTQ9UBM1 199 aa11.96□□□□□ -0.49
DHFR-201ENST00000439211 ZZEF1O43149 2961 aa11.96□□□□□ -0.5
DHFR-201ENST00000439211 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.96□□□□□ -0.5
DHFR-201ENST00000439211 IGLV2-18A0A075B6J9 118 aa11.95□□□□□ -0.5
DHFR-201ENST00000439211 IMUPQ9GZP8 106 aa11.95□□□□□ -0.5
DHFR-201ENST00000439211 F8W735 103 aaPredicted RBP11.95□□□□□ -0.5
DHFR-201ENST00000439211 RPL39P62891 51 aaKnown RBP11.95□□□□□ -0.5
DHFR-201ENST00000439211 A0A0B4J2C4 111 aa11.94□□□□□ -0.5
DHFR-201ENST00000439211 ODF3BA8MYP8 253 aa11.94□□□□□ -0.5
DHFR-201ENST00000439211 ADORA2A-AS1P86434 159 aa11.94□□□□□ -0.5
DHFR-201ENST00000439211 TRBV7-7A0A0K0K1E9 115 aa11.94□□□□□ -0.5
DHFR-201ENST00000439211 KIR2DL5BQ8NHK3 375 aa11.94□□□□□ -0.5
DHFR-201ENST00000439211 TMEM263Q8WUH6 116 aaKnown RBP11.94□□□□□ -0.5
DHFR-201ENST00000439211 IGKV3D-20A0A0C4DH25 116 aa11.94□□□□□ -0.5
DHFR-201ENST00000439211 DNAL4O96015 105 aa11.94□□□□□ -0.5
DHFR-201ENST00000439211 HIST1H4AP62805 103 aaKnown RBP11.94□□□□□ -0.5
DHFR-201ENST00000439211 PPP1R17O96001 155 aa11.93□□□□□ -0.5
DHFR-201ENST00000439211 SYNJ2BPP57105 145 aa11.93□□□□□ -0.5
DHFR-201ENST00000439211 C10orf105Q8TEF2 133 aa11.93□□□□□ -0.5
DHFR-201ENST00000439211 F6UB75 175 aa11.93□□□□□ -0.5
DHFR-201ENST00000439211 ATP5G1P05496 136 aa11.93□□□□□ -0.5
DHFR-201ENST00000439211 IGKV3D-7A0A0C4DH55 119 aa11.93□□□□□ -0.5
DHFR-201ENST00000439211 TRBV7-1A0A0A6YYK4 115 aa11.92□□□□□ -0.5
DHFR-201ENST00000439211 TSPEAR-AS2P59090 65 aa11.92□□□□□ -0.5
DHFR-201ENST00000439211 RELNP78509 3460 aa11.92□□□□□ -0.5
DHFR-201ENST00000439211 TRAV21A0A0B4J279 112 aa11.92□□□□□ -0.5
DHFR-201ENST00000439211 FAM240AA0A1B0GVK7 77 aa11.92□□□□□ -0.5
DHFR-201ENST00000439211 TRBV30A0A0K0K1B3 111 aa11.91□□□□□ -0.5
DHFR-201ENST00000439211 COX6B1P14854 86 aa11.91□□□□□ -0.5
DHFR-201ENST00000439211 MRAPQ8TCY5 172 aa11.91□□□□□ -0.5
DHFR-201ENST00000439211 IGF1P05019 195 aa11.91□□□□□ -0.5
DHFR-201ENST00000439211 CCDC140Q96MF4 163 aa11.91□□□□□ -0.5
DHFR-201ENST00000439211 C11orf21Q9P2W6 132 aa11.9□□□□□ -0.5
DHFR-201ENST00000439211 USP9XQ93008 2570 aaPredicted RBP11.9□□□□□ -0.5
DHFR-201ENST00000439211 TMEM258P61165 79 aa11.89□□□□□ -0.51
DHFR-201ENST00000439211 ZNF415Q09FC8 603 aa11.89□□□□□ -0.51
DHFR-201ENST00000439211 MOB4Q9Y3A3 225 aa11.89□□□□□ -0.51
DHFR-201ENST00000439211 WIPF1O43516 503 aa11.89□□□□□ -0.51
DHFR-201ENST00000439211 SDIM1Q6ZPB5 146 aa11.89□□□□□ -0.51
DHFR-201ENST00000439211 C9orf139Q6ZV77 190 aa11.89□□□□□ -0.51
DHFR-201ENST00000439211 LINC00477Q96M19 166 aa11.89□□□□□ -0.51
DHFR-201ENST00000439211 OVOL1O14753 267 aa11.88□□□□□ -0.51
DHFR-201ENST00000439211 H3BUX3 64 aa11.88□□□□□ -0.51
DHFR-201ENST00000439211 TIMM21Q9BVV7 248 aa11.88□□□□□ -0.51
DHFR-201ENST00000439211 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
DHFR-201ENST00000439211 ZFAND3Q9H8U3 227 aa11.88□□□□□ -0.51
DHFR-201ENST00000439211 LINC01546A6NGU7 62 aa11.87□□□□□ -0.51
DHFR-201ENST00000439211 GNRH2O43555 120 aa11.87□□□□□ -0.51
DHFR-201ENST00000439211 RPS28P62857 69 aaKnown RBP11.87□□□□□ -0.51
DHFR-201ENST00000439211 SIRPDQ9H106 197 aa11.87□□□□□ -0.51
DHFR-201ENST00000439211 ASH1LQ9NR48 2969 aaKnown RBP11.87□□□□□ -0.51
DHFR-201ENST00000439211 A0A087WWL8 130 aa11.87□□□□□ -0.51
DHFR-201ENST00000439211 VCYO14598 125 aa11.87□□□□□ -0.51
DHFR-201ENST00000439211 LEPROTO15243 131 aa11.87□□□□□ -0.51
DHFR-201ENST00000439211 TRBV12-3P01733 135 aa11.87□□□□□ -0.51
DHFR-201ENST00000439211 FBXL19-AS1Q494R0 122 aa11.87□□□□□ -0.51
DHFR-201ENST00000439211 Q6ZSV7 163 aa11.87□□□□□ -0.51
DHFR-201ENST00000439211 TMEM141Q96I45 108 aa11.87□□□□□ -0.51
DHFR-201ENST00000439211 OPRPNQ99935 248 aaPredicted RBP11.87□□□□□ -0.51
DHFR-201ENST00000439211 UNQ9165/PRO28630Q6UXU0 137 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms