RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 LINC01600Q96MT4 127 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 HIGD2AQ9BW72 106 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 FXYD6Q9H0Q3 95 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 CST11Q9H112 138 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 LINC00474Q9P2X8 69 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 TOP2BQ02880 1626 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 CASP8AP2Q9UKL3 1982 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 PLXNA3P51805 1871 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 SAMD9Q5K651 1589 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 CDC42BPGQ6DT37 1551 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 CEP170BQ9Y4F5 1589 aaPredicted RBP1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 LTBP2Q14767 1821 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 ZFC3H1O60293 1989 aaKnown RBP1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 SCN9AQ15858 1988 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 TANC2Q9HCD6 1990 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 SNRPGP15A8MWD9 76 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 NDUFC1O43677 76 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 IGLV1-51P01701 117 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 UBE2G1P62253 170 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 SPANXN1Q5VSR9 72 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 LYZL1Q6UWQ5 148 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 Q6ZS52 159 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 CYP2G1PQ6ZSU1 146 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 LINC00467Q9BRT7 94 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 SLC50A1Q9BRV3 221 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 MRPL35Q9NZE8 188 aaKnown RBP1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 TRPM2O94759 1503 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 SLX4Q8IY92 1834 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 ARHGEF5Q12774 1597 aa1.89□□□□□ -2.11
LSM1P1-201ENST00000438629 MGAMO43451 1857 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 ALKQ9UM73 1620 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 LAMB2P55268 1798 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 ANKRD36CQ5JPF3 1778 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 NFAT5O94916 1531 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 IGKV2D-26A0A0A0MRZ7 120 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 PIGBOS1A0A0B4J2F0 54 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 A0A1B0GU33 70 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 hDV103S1A0JD37 113 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 C19orf71A6NCJ1 209 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 H7BZZ5 65 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 GNRH2O43555 120 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 ACYP1P07311 99 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 C3orf79P0CE67 100 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 COX8AP10176 69 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 FXYD2P54710 66 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 DSCR4P56555 118 aaPredicted RBP1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 ESRGQ1W209 222 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 TMEM170BQ5T4T1 132 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 LINC00269Q8N2A0 174 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 Q8N814 137 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 MANBALQ9NQG1 85 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 NDUFA12Q9UI09 145 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 MROH2BQ7Z745 1585 aa1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 POLR1AO95602 1720 aaPredicted RBP1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 CICQ96RK0 1608 aaPredicted RBP1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 EIF2AK4Q9P2K8 1649 aaKnown RBP1.88□□□□□ -2.11
LSM1P1-201ENST00000438629 LOC285556D6RIA3 1793 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 TRAV13-2A0A0B4J235 113 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 A0A0D9SFI3 127 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 LOC107984156A0A0G2JMH3 177 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 A0A0G2JND7 137 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 TCRBV4S1A1TA0A5B7 111 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 B4DSR2 109 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 RPL28P46779 137 aaKnown RBP1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 LYPD5Q6UWN5 251 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 BRD3OSQ6XYD6 125 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 LINC00643Q86TS7 51 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 ARL17AQ8IVW1 177 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 Q8IYB0 196 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 FAM19A2Q8N3H0 131 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 Q8NAQ8 132 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 DYNLRB2Q8TF09 96 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 TMEM141Q96I45 108 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 WDR90Q96KV7 1748 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 Q96M85 177 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 SMIM7Q9BQ49 75 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 HILPDAQ9Y5L2 63 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 FAM215AQ9Y5M1 114 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 MUC22E2RYF6 1773 aaPredicted RBP1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 PAPPAQ13219 1627 aa1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 PHRF1Q9P1Y6 1649 aaKnown RBP1.87□□□□□ -2.11
LSM1P1-201ENST00000438629 C5P01031 1676 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 TRAV7A0A075B6U4 112 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 TRAV3A0A0B4J244 114 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 TRBV10-2A0A0K0K1G8 114 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 C17orf98A8MV24 154 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 H7C2G1 150 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 KLKP1Q107X0 134 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 ZNF56Q15929 161 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 SLC48A1Q6P1K1 146 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 DEFB107AQ8IZN7 70 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 Q8NDZ9 215 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 LRP5O75197 1615 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 CLTCL1P53675 1640 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 LTBP4Q8N2S1 1624 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 TSC2P49815 1807 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 COL4A6Q14031 1691 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 PLXNA2O75051 1894 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 AGLP35573 1532 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms