RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 DNLZQ5SXM8 178 aa5.11□□□□□ -1.59
VPS50-204ENST00000438395 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
VPS50-204ENST00000438395 UFSP1Q6NVU6 142 aa5.11□□□□□ -1.59
VPS50-204ENST00000438395 SCXQ7RTU7 201 aa5.11□□□□□ -1.59
VPS50-204ENST00000438395 C15orf54Q8N8G6 183 aa5.11□□□□□ -1.59
VPS50-204ENST00000438395 SFRP2Q96HF1 295 aa5.11□□□□□ -1.59
VPS50-204ENST00000438395 CHCHD5Q9BSY4 110 aa5.11□□□□□ -1.59
VPS50-204ENST00000438395 CHAC1Q9BUX1 264 aa5.11□□□□□ -1.59
VPS50-204ENST00000438395 ZNF471Q9BX82 626 aaPredicted RBP5.11□□□□□ -1.59
VPS50-204ENST00000438395 VPS13BQ7Z7G8 4022 aa5.11□□□□□ -1.59
VPS50-204ENST00000438395 RNF222A6NCQ9 220 aa5.1□□□□□ -1.59
VPS50-204ENST00000438395 F5H697 171 aa5.1□□□□□ -1.59
VPS50-204ENST00000438395 ARPC5O15511 151 aa5.1□□□□□ -1.59
VPS50-204ENST00000438395 LTAP01374 205 aa5.1□□□□□ -1.59
VPS50-204ENST00000438395 HLA-DQA1P01909 254 aa5.1□□□□□ -1.59
VPS50-204ENST00000438395 ANGP03950 147 aaKnown RBP5.1□□□□□ -1.59
VPS50-204ENST00000438395 SMIM17P0DL12 118 aa5.1□□□□□ -1.59
VPS50-204ENST00000438395 FHITP49789 147 aa5.1□□□□□ -1.59
VPS50-204ENST00000438395 SPANXN1Q5VSR9 72 aa5.1□□□□□ -1.59
VPS50-204ENST00000438395 BATF3Q9NR55 127 aa5.1□□□□□ -1.59
VPS50-204ENST00000438395 Q9UF83 564 aa5.1□□□□□ -1.59
VPS50-204ENST00000438395 TRBV6-8A0A0A6YYG3 113 aa5.09□□□□□ -1.59
VPS50-204ENST00000438395 TRBV6-1A0A0K0K1D8 114 aa5.09□□□□□ -1.59
VPS50-204ENST00000438395 S100A9P06702 114 aaKnown RBP5.09□□□□□ -1.59
VPS50-204ENST00000438395 RAB4BP61018 213 aa5.09□□□□□ -1.59
VPS50-204ENST00000438395 UBE2D3P61077 147 aa5.09□□□□□ -1.59
VPS50-204ENST00000438395 UBE2D2P62837 147 aa5.09□□□□□ -1.59
VPS50-204ENST00000438395 ZNF674Q2M3X9 581 aa5.09□□□□□ -1.59
VPS50-204ENST00000438395 TMEM97Q5BJF2 176 aa5.09□□□□□ -1.59
VPS50-204ENST00000438395 Q5BKY6 102 aa5.09□□□□□ -1.59
VPS50-204ENST00000438395 COX8CQ7Z4L0 72 aa5.09□□□□□ -1.59
VPS50-204ENST00000438395 FAM213BQ8TBF2 198 aa5.09□□□□□ -1.59
VPS50-204ENST00000438395 SFT2D1Q8WV19 159 aa5.09□□□□□ -1.59
VPS50-204ENST00000438395 AP1S3Q96PC3 154 aa5.09□□□□□ -1.59
VPS50-204ENST00000438395 A0A1B0GV50 99 aa5.08□□□□□ -1.6
VPS50-204ENST00000438395 KRTAP29-1A8MX34 341 aaPredicted RBP5.08□□□□□ -1.6
VPS50-204ENST00000438395 PAGE4O60829 102 aa5.08□□□□□ -1.6
VPS50-204ENST00000438395 CRIP1P50238 77 aa5.08□□□□□ -1.6
VPS50-204ENST00000438395 MIAQ16674 131 aa5.08□□□□□ -1.6
VPS50-204ENST00000438395 PRR27Q6MZM9 219 aa5.08□□□□□ -1.6
VPS50-204ENST00000438395 OR10AG1Q8NH19 301 aa5.08□□□□□ -1.6
VPS50-204ENST00000438395 DNAJC30Q96LL9 226 aa5.08□□□□□ -1.6
VPS50-204ENST00000438395 UMAD1C9J7I0 102 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 USP17L23D6RBM5 183 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 IGLV2-8P01709 118 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 CXCL1P09341 107 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 SSTP61278 116 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 RPL37AP61513 92 aaKnown RBP5.07□□□□□ -1.6
VPS50-204ENST00000438395 MPV17L2Q567V2 206 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 SERTAD4-AS1Q5TG53 156 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 ATRAIDQ6UW56 229 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 BAGE2Q86Y30 109 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 NEXN-AS1Q8NBZ9 246 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 OR10G8Q8NGN5 311 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 CIRBP-AS1Q8TBR5 109 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 TPPP3Q9BW30 176 aa5.07□□□□□ -1.6
VPS50-204ENST00000438395 TRBV25-1A0A075B6N4 114 aa5.06□□□□□ -1.6
VPS50-204ENST00000438395 MUC21A0A0G2JKD1 596 aa5.06□□□□□ -1.6
VPS50-204ENST00000438395 MUC21A0A140T8X8 626 aa5.06□□□□□ -1.6
VPS50-204ENST00000438395 H7C1H1 209 aa5.06□□□□□ -1.6
VPS50-204ENST00000438395 MGPP08493 103 aa5.06□□□□□ -1.6
VPS50-204ENST00000438395 EIF5AP63241 154 aaKnown RBP5.06□□□□□ -1.6
VPS50-204ENST00000438395 RPL19P84098 196 aaKnown RBP5.06□□□□□ -1.6
VPS50-204ENST00000438395 RGS21Q2M5E4 152 aa5.06□□□□□ -1.6
VPS50-204ENST00000438395 CLPSL2Q6UWE3 100 aa5.06□□□□□ -1.6
VPS50-204ENST00000438395 KCNRGQ8N5I3 272 aa5.06□□□□□ -1.6
VPS50-204ENST00000438395 IGHV1-24A0A0C4DH33 117 aa5.05□□□□□ -1.6
VPS50-204ENST00000438395 KANTRA0A1W2PQU2 76 aa5.05□□□□□ -1.6
VPS50-204ENST00000438395 OXTP01178 125 aa5.05□□□□□ -1.6
VPS50-204ENST00000438395 OR5AL1P0C617 328 aa5.05□□□□□ -1.6
VPS50-204ENST00000438395 GAGE6Q13070 117 aa5.05□□□□□ -1.6
VPS50-204ENST00000438395 C21orf62-AS1Q17RA5 79 aa5.05□□□□□ -1.6
VPS50-204ENST00000438395 ENHOQ6UWT2 76 aa5.05□□□□□ -1.6
VPS50-204ENST00000438395 DAZAP1Q96EP5 407 aaKnown RBP5.05□□□□□ -1.6
VPS50-204ENST00000438395 DERL1Q9BUN8 251 aa5.05□□□□□ -1.6
VPS50-204ENST00000438395 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
VPS50-204ENST00000438395 XKRY2A2RUG3 117 aa5.04□□□□□ -1.6
VPS50-204ENST00000438395 TEX46H3BTG2 121 aa5.04□□□□□ -1.6
VPS50-204ENST00000438395 SNAI2O43623 268 aa5.04□□□□□ -1.6
VPS50-204ENST00000438395 RPS20P60866 119 aaKnown RBP5.04□□□□□ -1.6
VPS50-204ENST00000438395 RBX1P62877 108 aa5.04□□□□□ -1.6
VPS50-204ENST00000438395 ZNF345Q14585 488 aa5.04□□□□□ -1.6
VPS50-204ENST00000438395 DGAT2L7PQ6IED9 249 aa5.04□□□□□ -1.6
VPS50-204ENST00000438395 LINC00269Q8N2A0 174 aa5.04□□□□□ -1.6
VPS50-204ENST00000438395 DPH3Q96FX2 82 aa5.04□□□□□ -1.6
VPS50-204ENST00000438395 MANBALQ9NQG1 85 aa5.04□□□□□ -1.6
VPS50-204ENST00000438395 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.03□□□□□ -1.6
VPS50-204ENST00000438395 A0A0D9SG52 128 aa5.03□□□□□ -1.6
VPS50-204ENST00000438395 hDV102S1A0JD36 115 aa5.03□□□□□ -1.6
VPS50-204ENST00000438395 UBE2L6O14933 153 aa5.03□□□□□ -1.6
VPS50-204ENST00000438395 RPL35P42766 123 aaKnown RBP5.03□□□□□ -1.6
VPS50-204ENST00000438395 WDR73Q6P4I2 378 aa5.03□□□□□ -1.6
VPS50-204ENST00000438395 TMUB2Q71RG4 321 aa5.03□□□□□ -1.6
VPS50-204ENST00000438395 FER1L6-AS1Q8NA97 138 aa5.03□□□□□ -1.6
VPS50-204ENST00000438395 CLRN3Q8NCR9 226 aa5.03□□□□□ -1.6
VPS50-204ENST00000438395 OR2D3Q8NGH3 330 aa5.03□□□□□ -1.6
VPS50-204ENST00000438395 MBD3L1Q8WWY6 194 aa5.03□□□□□ -1.6
VPS50-204ENST00000438395 TMEM243Q9BU79 118 aa5.03□□□□□ -1.6
VPS50-204ENST00000438395 CYTL1Q9NRR1 136 aa5.03□□□□□ -1.6
VPS50-204ENST00000438395 GNG13Q9P2W3 67 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms