RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 SPXQ9BT56 116 aa7.83□□□□□ -1.16
HMGCL-204ENST00000436439 TMEM70Q9BUB7 260 aa7.83□□□□□ -1.16
HMGCL-204ENST00000436439 MSRB1Q9NZV6 116 aa7.83□□□□□ -1.16
HMGCL-204ENST00000436439 MDFICQ9P1T7 246 aa7.83□□□□□ -1.16
HMGCL-204ENST00000436439 VPS13DQ5THJ4 4388 aa7.82□□□□□ -1.16
HMGCL-204ENST00000436439 C20orf202A1L168 122 aa7.82□□□□□ -1.16
HMGCL-204ENST00000436439 SSTP61278 116 aa7.82□□□□□ -1.16
HMGCL-204ENST00000436439 LGALS9CQ6DKI2 356 aa7.82□□□□□ -1.16
HMGCL-204ENST00000436439 C16orf74Q96GX8 76 aa7.82□□□□□ -1.16
HMGCL-204ENST00000436439 C11orf68Q9H3H3 251 aaKnown RBP7.82□□□□□ -1.16
HMGCL-204ENST00000436439 MAP1LC3AQ9H492 121 aa7.82□□□□□ -1.16
HMGCL-204ENST00000436439 IGHV3OR16-12A0A075B7B8 117 aa7.81□□□□□ -1.16
HMGCL-204ENST00000436439 LINC01546A6NGU7 62 aa7.81□□□□□ -1.16
HMGCL-204ENST00000436439 NPYP01303 97 aa7.81□□□□□ -1.16
HMGCL-204ENST00000436439 HTN1P15515 57 aa7.81□□□□□ -1.16
HMGCL-204ENST00000436439 IFI27P40305 119 aaPredicted RBP7.81□□□□□ -1.16
HMGCL-204ENST00000436439 RRN3P1Q2M238 152 aa7.81□□□□□ -1.16
HMGCL-204ENST00000436439 PET117Q6UWS5 81 aa7.81□□□□□ -1.16
HMGCL-204ENST00000436439 SYT8Q8NBV8 401 aa7.81□□□□□ -1.16
HMGCL-204ENST00000436439 C11orf45Q8TAV5 145 aa7.81□□□□□ -1.16
HMGCL-204ENST00000436439 C14orf144Q96I85 54 aa7.81□□□□□ -1.16
HMGCL-204ENST00000436439 MAP1LC3CQ9BXW4 147 aa7.81□□□□□ -1.16
HMGCL-204ENST00000436439 KRTAP17-1Q9BYP8 105 aa7.81□□□□□ -1.16
HMGCL-204ENST00000436439 DNAH6Q9C0G6 4158 aa7.8□□□□□ -1.16
HMGCL-204ENST00000436439 SYS1-DBNDD2H3BUS1 97 aa7.8□□□□□ -1.16
HMGCL-204ENST00000436439 M0R2P5 195 aa7.8□□□□□ -1.16
HMGCL-204ENST00000436439 AZU1P20160 251 aa7.8□□□□□ -1.16
HMGCL-204ENST00000436439 DAZ2Q13117 558 aaKnown RBP7.8□□□□□ -1.16
HMGCL-204ENST00000436439 MRAP2Q96G30 205 aa7.8□□□□□ -1.16
HMGCL-204ENST00000436439 MIEN1Q9BRT3 115 aa7.8□□□□□ -1.16
HMGCL-204ENST00000436439 NXT2Q9NPJ8 142 aaKnown RBP7.8□□□□□ -1.16
HMGCL-204ENST00000436439 PAM16Q9Y3D7 125 aa7.8□□□□□ -1.16
HMGCL-204ENST00000436439 TIMM8BQ9Y5J9 83 aaPredicted RBP7.8□□□□□ -1.16
HMGCL-204ENST00000436439 X6R8D5 127 aa7.8□□□□□ -1.16
HMGCL-204ENST00000436439 LOC389332A0A1B0GUA5 103 aa7.79□□□□□ -1.16
HMGCL-204ENST00000436439 PLAC8L1A1L4L8 177 aa7.79□□□□□ -1.16
HMGCL-204ENST00000436439 PRSS47A8MTI9 375 aa7.79□□□□□ -1.16
HMGCL-204ENST00000436439 SMKR1H3BMG3 65 aa7.79□□□□□ -1.16
HMGCL-204ENST00000436439 M0R381 172 aa7.79□□□□□ -1.16
HMGCL-204ENST00000436439 TNFRSF6BO95407 300 aa7.79□□□□□ -1.16
HMGCL-204ENST00000436439 NCR2O95944 276 aa7.79□□□□□ -1.16
HMGCL-204ENST00000436439 PRM2P04554 102 aa7.79□□□□□ -1.16
HMGCL-204ENST00000436439 LGALS9BQ3B8N2 356 aa7.79□□□□□ -1.16
HMGCL-204ENST00000436439 MRPL52Q86TS9 123 aaKnown RBP7.79□□□□□ -1.16
HMGCL-204ENST00000436439 Q8NAQ8 132 aa7.79□□□□□ -1.16
HMGCL-204ENST00000436439 AP1S3Q96PC3 154 aa7.79□□□□□ -1.16
HMGCL-204ENST00000436439 NACAE9PAV3 2078 aa7.79□□□□□ -1.16
HMGCL-204ENST00000436439 TRAV9-2A0A087WT02 112 aa7.78□□□□□ -1.16
HMGCL-204ENST00000436439 HBDP02042 147 aa7.78□□□□□ -1.16
HMGCL-204ENST00000436439 EVI2AP22794 236 aa7.78□□□□□ -1.16
HMGCL-204ENST00000436439 SPATA45Q537H7 98 aa7.78□□□□□ -1.16
HMGCL-204ENST00000436439 LBHQ53QV2 105 aaPredicted RBP7.78□□□□□ -1.16
HMGCL-204ENST00000436439 SPATA12Q7Z6I5 190 aa7.78□□□□□ -1.16
HMGCL-204ENST00000436439 RASL10AQ92737 203 aa7.78□□□□□ -1.16
HMGCL-204ENST00000436439 DPH3P1Q9H4G8 78 aa7.78□□□□□ -1.16
HMGCL-204ENST00000436439 IGHV4-28A0A0C4DH34 117 aa7.77□□□□□ -1.17
HMGCL-204ENST00000436439 MIFP14174 115 aa7.77□□□□□ -1.17
HMGCL-204ENST00000436439 ZNF876PQ49A33 203 aa7.77□□□□□ -1.17
HMGCL-204ENST00000436439 LINC00173Q6ZV60 143 aa7.77□□□□□ -1.17
HMGCL-204ENST00000436439 POM121L12Q8N7R1 296 aa7.77□□□□□ -1.17
HMGCL-204ENST00000436439 Q8N8P6 123 aa7.77□□□□□ -1.17
HMGCL-204ENST00000436439 APLNQ9ULZ1 77 aa7.77□□□□□ -1.17
HMGCL-204ENST00000436439 KIF25-AS1Q9Y6Z4 181 aa7.77□□□□□ -1.17
HMGCL-204ENST00000436439 HERC2O95714 4834 aa7.76□□□□□ -1.17
HMGCL-204ENST00000436439 A0A096LNJ9 63 aa7.76□□□□□ -1.17
HMGCL-204ENST00000436439 A8MWV9 139 aa7.76□□□□□ -1.17
HMGCL-204ENST00000436439 LINC01545Q5VT33 79 aa7.76□□□□□ -1.17
HMGCL-204ENST00000436439 NRACQ8N912 160 aa7.76□□□□□ -1.17
HMGCL-204ENST00000436439 UQCR10Q9UDW1 63 aa7.76□□□□□ -1.17
HMGCL-204ENST00000436439 HECTD4Q9Y4D8 3996 aa7.76□□□□□ -1.17
HMGCL-204ENST00000436439 IGLL5B9A064 214 aa7.75□□□□□ -1.17
HMGCL-204ENST00000436439 PPP1R17O96001 155 aa7.75□□□□□ -1.17
HMGCL-204ENST00000436439 CRYGDP07320 174 aa7.75□□□□□ -1.17
HMGCL-204ENST00000436439 FCER1GP30273 86 aa7.75□□□□□ -1.17
HMGCL-204ENST00000436439 LINC00315P59091 139 aa7.75□□□□□ -1.17
HMGCL-204ENST00000436439 IGLV2-18A0A075B6J9 118 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 CIDEAO60543 219 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 SMIM17P0DL12 118 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 IGLC3P0DOY3 106 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 UFSP1Q6NVU6 142 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 Q6ZTC4 211 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 ATOH7Q8N100 152 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 LINC00612Q8N6U2 182 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 C14orf178Q8N769 122 aaPredicted RBP7.74□□□□□ -1.17
HMGCL-204ENST00000436439 C18orf15Q96N68 181 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 C20orf78Q9BR46 151 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 JPT2Q9H910 190 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 ST20Q9HBF5 79 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 CELA1Q9UNI1 258 aa7.74□□□□□ -1.17
HMGCL-204ENST00000436439 HSBP1L1C9JCN9 74 aa7.73□□□□□ -1.17
HMGCL-204ENST00000436439 K7EMI3 77 aa7.73□□□□□ -1.17
HMGCL-204ENST00000436439 RHODO00212 210 aa7.73□□□□□ -1.17
HMGCL-204ENST00000436439 RS1O15537 224 aa7.73□□□□□ -1.17
HMGCL-204ENST00000436439 GAS8-AS1O95177 125 aa7.73□□□□□ -1.17
HMGCL-204ENST00000436439 GATA1P15976 413 aaPredicted RBP7.73□□□□□ -1.17
HMGCL-204ENST00000436439 ZFP2Q6ZN57 461 aa7.73□□□□□ -1.17
HMGCL-204ENST00000436439 C2orf88Q9BSF0 95 aa7.73□□□□□ -1.17
HMGCL-204ENST00000436439 NOP10Q9NPE3 64 aaKnown RBP7.73□□□□□ -1.17
HMGCL-204ENST00000436439 MRPL16Q9NX20 251 aaKnown RBP7.73□□□□□ -1.17
HMGCL-204ENST00000436439 TRGV1A0A0A0MS02 117 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms