RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SPINK8P0C7L1 97 aa11.64□□□□□ -0.55
SCARF1-203ENST00000434376 TM2D2Q9BX73 214 aa11.64□□□□□ -0.55
SCARF1-203ENST00000434376 PROK1P58294 105 aa11.63□□□□□ -0.55
SCARF1-203ENST00000434376 ZFP2Q6ZN57 461 aa11.63□□□□□ -0.55
SCARF1-203ENST00000434376 C19orf54Q5BKX5 351 aa11.63□□□□□ -0.55
SCARF1-203ENST00000434376 GEMIN7Q9H840 131 aaKnown RBP11.63□□□□□ -0.55
SCARF1-203ENST00000434376 A0A087WX48 190 aa11.63□□□□□ -0.55
SCARF1-203ENST00000434376 RNASE3P12724 160 aaKnown RBP11.63□□□□□ -0.55
SCARF1-203ENST00000434376 Q8N1Y9 231 aa11.63□□□□□ -0.55
SCARF1-203ENST00000434376 SUMO2P61956 95 aaKnown RBP11.62□□□□□ -0.55
SCARF1-203ENST00000434376 PRADC1Q9BSG0 188 aa11.62□□□□□ -0.55
SCARF1-203ENST00000434376 MYMXA0A1B0GTQ4 84 aa11.62□□□□□ -0.55
SCARF1-203ENST00000434376 RASL10AQ92737 203 aa11.62□□□□□ -0.55
SCARF1-203ENST00000434376 YAE1D1Q9NRH1 226 aa11.62□□□□□ -0.55
SCARF1-203ENST00000434376 XCL2Q9UBD3 114 aa11.62□□□□□ -0.55
SCARF1-203ENST00000434376 RBAKDNA6NC62 111 aa11.62□□□□□ -0.55
SCARF1-203ENST00000434376 ZNF876PQ49A33 203 aa11.62□□□□□ -0.55
SCARF1-203ENST00000434376 H7C1H1 209 aa11.61□□□□□ -0.55
SCARF1-203ENST00000434376 TMEM61Q8N0U2 210 aa11.61□□□□□ -0.55
SCARF1-203ENST00000434376 DCANP1Q8TF63 244 aa11.61□□□□□ -0.55
SCARF1-203ENST00000434376 SOCS3O14543 225 aa11.61□□□□□ -0.55
SCARF1-203ENST00000434376 DPH3P1Q9H4G8 78 aa11.61□□□□□ -0.55
SCARF1-203ENST00000434376 F8P00451 2351 aa11.6□□□□□ -0.55
SCARF1-203ENST00000434376 DUSP14O95147 198 aaKnown RBP11.6□□□□□ -0.55
SCARF1-203ENST00000434376 PLNP26678 52 aa11.6□□□□□ -0.55
SCARF1-203ENST00000434376 NRACQ8N912 160 aa11.6□□□□□ -0.55
SCARF1-203ENST00000434376 PLEKHB2Q96CS7 222 aa11.6□□□□□ -0.55
SCARF1-203ENST00000434376 IGHV3-38A0A0C4DH36 116 aa11.6□□□□□ -0.55
SCARF1-203ENST00000434376 IGHV3-53P01767 116 aa11.6□□□□□ -0.55
SCARF1-203ENST00000434376 MT-ATP8P03928 68 aa11.6□□□□□ -0.55
SCARF1-203ENST00000434376 SMIM2Q9BVW6 85 aa11.6□□□□□ -0.55
SCARF1-203ENST00000434376 ZMAT4Q9H898 229 aa11.6□□□□□ -0.55
SCARF1-203ENST00000434376 Q9UF83 564 aa11.6□□□□□ -0.55
SCARF1-203ENST00000434376 F8VRH5 84 aa11.6□□□□□ -0.55
SCARF1-203ENST00000434376 DLX4Q92988 240 aaPredicted RBP11.6□□□□□ -0.55
SCARF1-203ENST00000434376 ZNF702PQ9H963 129 aa11.6□□□□□ -0.55
SCARF1-203ENST00000434376 CRYBA4P53673 196 aa11.59□□□□□ -0.55
SCARF1-203ENST00000434376 C2orf66Q6UXQ4 117 aa11.59□□□□□ -0.55
SCARF1-203ENST00000434376 TMEM170BQ5T4T1 132 aa11.59□□□□□ -0.55
SCARF1-203ENST00000434376 TENM1Q9UKZ4 2725 aa11.58□□□□□ -0.55
SCARF1-203ENST00000434376 AKAP9Q99996 3911 aa11.58□□□□□ -0.56
SCARF1-203ENST00000434376 RAX2Q96IS3 184 aa11.58□□□□□ -0.56
SCARF1-203ENST00000434376 LGALS1P09382 135 aaKnown RBP11.58□□□□□ -0.56
SCARF1-203ENST00000434376 DSCR9P59020 149 aa11.58□□□□□ -0.56
SCARF1-203ENST00000434376 MAST4O15021 2626 aa11.58□□□□□ -0.56
SCARF1-203ENST00000434376 FOXI1Q12951 378 aa11.57□□□□□ -0.56
SCARF1-203ENST00000434376 NSUN5P1Q3KNT7 163 aa11.57□□□□□ -0.56
SCARF1-203ENST00000434376 TP53TG1Q9Y2A0 90 aa11.57□□□□□ -0.56
SCARF1-203ENST00000434376 CEMP1Q6PRD7 247 aaPredicted RBP11.57□□□□□ -0.56
SCARF1-203ENST00000434376 WFDC10AQ9H1F0 79 aa11.57□□□□□ -0.56
SCARF1-203ENST00000434376 CR1P17927 2039 aa11.57□□□□□ -0.56
SCARF1-203ENST00000434376 PRSS29PA6NIE9 313 aa11.57□□□□□ -0.56
SCARF1-203ENST00000434376 SUMO4Q6EEV6 95 aa11.57□□□□□ -0.56
SCARF1-203ENST00000434376 SDHAF1A6NFY7 115 aa11.56□□□□□ -0.56
SCARF1-203ENST00000434376 Q1RN00 199 aa11.56□□□□□ -0.56
SCARF1-203ENST00000434376 LINC01587Q99440 93 aa11.56□□□□□ -0.56
SCARF1-203ENST00000434376 KIR2DL4Q99706 377 aa11.56□□□□□ -0.56
SCARF1-203ENST00000434376 CFHR3Q02985 330 aa11.56□□□□□ -0.56
SCARF1-203ENST00000434376 MORN3Q6PF18 240 aaPredicted RBP11.56□□□□□ -0.56
SCARF1-203ENST00000434376 TMEM238LA0A1B0GVL6 79 aa11.55□□□□□ -0.56
SCARF1-203ENST00000434376 A6NJY4 79 aa11.55□□□□□ -0.56
SCARF1-203ENST00000434376 GATA3P23771 443 aa11.55□□□□□ -0.56
SCARF1-203ENST00000434376 NFE4Q86UQ8 179 aa11.55□□□□□ -0.56
SCARF1-203ENST00000434376 IGLV2-18A0A075B6J9 118 aa11.55□□□□□ -0.56
SCARF1-203ENST00000434376 TRBV7-3A0A075B6L6 115 aa11.55□□□□□ -0.56
SCARF1-203ENST00000434376 Q6YL49 198 aa11.55□□□□□ -0.56
SCARF1-203ENST00000434376 MRAP2Q96G30 205 aa11.55□□□□□ -0.56
SCARF1-203ENST00000434376 NOTCH1P46531 2555 aa11.55□□□□□ -0.56
SCARF1-203ENST00000434376 A0A0J9YX75 114 aa11.55□□□□□ -0.56
SCARF1-203ENST00000434376 SPATA25Q9BR10 227 aa11.55□□□□□ -0.56
SCARF1-203ENST00000434376 A0A096LNT2 108 aa11.54□□□□□ -0.56
SCARF1-203ENST00000434376 C1QTNF4Q9BXJ3 329 aa11.54□□□□□ -0.56
SCARF1-203ENST00000434376 NBEAL1Q6ZS30 2694 aa11.54□□□□□ -0.56
SCARF1-203ENST00000434376 CNFNQ9BYD5 112 aa11.53□□□□□ -0.56
SCARF1-203ENST00000434376 SCGB1A1P11684 91 aa11.53□□□□□ -0.56
SCARF1-203ENST00000434376 MRPL53Q96EL3 112 aaKnown RBP11.53□□□□□ -0.56
SCARF1-203ENST00000434376 STAB1Q9NY15 2570 aa11.53□□□□□ -0.56
SCARF1-203ENST00000434376 ADARB2-AS1A8MUL3 147 aa11.53□□□□□ -0.56
SCARF1-203ENST00000434376 TSPAN13O95857 204 aa11.53□□□□□ -0.56
SCARF1-203ENST00000434376 RPL35AP18077 110 aaKnown RBP11.53□□□□□ -0.56
SCARF1-203ENST00000434376 XGP55808 180 aa11.53□□□□□ -0.56
SCARF1-203ENST00000434376 TAL2Q16559 108 aa11.53□□□□□ -0.56
SCARF1-203ENST00000434376 COX8CQ7Z4L0 72 aa11.53□□□□□ -0.56
SCARF1-203ENST00000434376 RBMY1A1P0DJD3 496 aaKnown RBP11.52□□□□□ -0.56
SCARF1-203ENST00000434376 RBMY1CP0DJD4 496 aa11.52□□□□□ -0.56
SCARF1-203ENST00000434376 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.56
SCARF1-203ENST00000434376 ORMDL2Q53FV1 153 aa11.52□□□□□ -0.56
SCARF1-203ENST00000434376 BAALCQ8WXS3 180 aa11.52□□□□□ -0.56
SCARF1-203ENST00000434376 HIVEP1P15822 2718 aa11.52□□□□□ -0.57
SCARF1-203ENST00000434376 IGHV1OR15-1A0A075B7D0 117 aa11.52□□□□□ -0.57
SCARF1-203ENST00000434376 H3BUA1 57 aa11.52□□□□□ -0.57
SCARF1-203ENST00000434376 K7EQG2 157 aa11.52□□□□□ -0.57
SCARF1-203ENST00000434376 CD28P10747 220 aa11.52□□□□□ -0.57
SCARF1-203ENST00000434376 SMCPP49901 116 aaPredicted RBP11.52□□□□□ -0.57
SCARF1-203ENST00000434376 PRO0461Q9UI25 63 aa11.52□□□□□ -0.57
SCARF1-203ENST00000434376 ANAPC13Q9BS18 74 aa11.51□□□□□ -0.57
SCARF1-203ENST00000434376 SS18L2Q9UHA2 77 aa11.51□□□□□ -0.57
SCARF1-203ENST00000434376 PRSS47A8MTI9 375 aa11.51□□□□□ -0.57
SCARF1-203ENST00000434376 CRIP2P52943 208 aaPredicted RBP11.51□□□□□ -0.57
SCARF1-203ENST00000434376 RNF183Q96D59 192 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms