RNA–Protein interactions for RNA: ENST00000434274.2

LIMS1-209, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 3

Gene LIMS1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-209ENST00000434274 IGLV2-8P01709 118 aa9.9□□□□□ -0.82
LIMS1-209ENST00000434274 C14orf177Q52M58 125 aa9.9□□□□□ -0.82
LIMS1-209ENST00000434274 Q8N976 141 aa9.9□□□□□ -0.82
LIMS1-209ENST00000434274 Q9UF83 564 aa9.9□□□□□ -0.82
LIMS1-209ENST00000434274 DYNC1H1Q14204 4646 aaKnown RBP9.89□□□□□ -0.83
LIMS1-209ENST00000434274 TRBV25-1A0A075B6N4 114 aa9.89□□□□□ -0.83
LIMS1-209ENST00000434274 EPM2AB3EWF7 344 aa9.89□□□□□ -0.83
LIMS1-209ENST00000434274 CTRLP40313 264 aa9.89□□□□□ -0.83
LIMS1-209ENST00000434274 ATRAIDQ6UW56 229 aa9.89□□□□□ -0.83
LIMS1-209ENST00000434274 FRZBQ92765 325 aa9.89□□□□□ -0.83
LIMS1-209ENST00000434274 C1orf43Q9BWL3 253 aa9.89□□□□□ -0.83
LIMS1-209ENST00000434274 KLK12Q9UKR0 248 aa9.89□□□□□ -0.83
LIMS1-209ENST00000434274 TRBV20OR9-2A0A075B6H5 130 aa9.88□□□□□ -0.83
LIMS1-209ENST00000434274 RAB19A4D1S5 217 aa9.88□□□□□ -0.83
LIMS1-209ENST00000434274 TMEM262E9PQX1 116 aa9.88□□□□□ -0.83
LIMS1-209ENST00000434274 MGPP08493 103 aa9.88□□□□□ -0.83
LIMS1-209ENST00000434274 CHCHD5Q9BSY4 110 aa9.88□□□□□ -0.83
LIMS1-209ENST00000434274 DPH3P1Q9H4G8 78 aa9.88□□□□□ -0.83
LIMS1-209ENST00000434274 RPP21Q9H633 154 aaKnown RBP9.88□□□□□ -0.83
LIMS1-209ENST00000434274 KIF25-AS1Q9Y6Z4 181 aa9.88□□□□□ -0.83
LIMS1-209ENST00000434274 IGKV2D-24A0A075B6R9 120 aa9.87□□□□□ -0.83
LIMS1-209ENST00000434274 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
LIMS1-209ENST00000434274 MIAQ16674 131 aa9.87□□□□□ -0.83
LIMS1-209ENST00000434274 SMIM15Q7Z3B0 74 aa9.87□□□□□ -0.83
LIMS1-209ENST00000434274 UBE2WQ96B02 151 aa9.87□□□□□ -0.83
LIMS1-209ENST00000434274 CNFNQ9BYD5 112 aa9.87□□□□□ -0.83
LIMS1-209ENST00000434274 PCLOQ9Y6V0 5065 aa9.87□□□□□ -0.83
LIMS1-209ENST00000434274 RYR1P21817 5038 aa9.87□□□□□ -0.83
LIMS1-209ENST00000434274 IGHV1-24A0A0C4DH33 117 aa9.86□□□□□ -0.83
LIMS1-209ENST00000434274 MUC21A0A0G2JKD1 596 aa9.86□□□□□ -0.83
LIMS1-209ENST00000434274 MUC21A0A140T8X8 626 aa9.86□□□□□ -0.83
LIMS1-209ENST00000434274 IQCJQ1A5X6 159 aa9.86□□□□□ -0.83
LIMS1-209ENST00000434274 RASL11AQ6T310 242 aa9.86□□□□□ -0.83
LIMS1-209ENST00000434274 LYPD6BQ8NI32 183 aa9.86□□□□□ -0.83
LIMS1-209ENST00000434274 PGLYRP4Q96LB8 373 aa9.86□□□□□ -0.83
LIMS1-209ENST00000434274 M0QY20 66 aa9.85□□□□□ -0.83
LIMS1-209ENST00000434274 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
LIMS1-209ENST00000434274 TEX261Q6UWH6 196 aa9.85□□□□□ -0.83
LIMS1-209ENST00000434274 LYZL1Q6UWQ5 148 aa9.85□□□□□ -0.83
LIMS1-209ENST00000434274 ALKAL2Q6UX46 152 aa9.85□□□□□ -0.83
LIMS1-209ENST00000434274 Q8N3U1 123 aa9.85□□□□□ -0.83
LIMS1-209ENST00000434274 hCG_2014768A0A024R1R8 64 aa9.84□□□□□ -0.83
LIMS1-209ENST00000434274 GZMBP10144 247 aa9.84□□□□□ -0.83
LIMS1-209ENST00000434274 CT83Q5H943 113 aa9.84□□□□□ -0.83
LIMS1-209ENST00000434274 SUMO4Q6EEV6 95 aa9.84□□□□□ -0.83
LIMS1-209ENST00000434274 NUDT10Q8NFP7 164 aa9.84□□□□□ -0.83
LIMS1-209ENST00000434274 NUDT11Q96G61 164 aa9.84□□□□□ -0.83
LIMS1-209ENST00000434274 A8MWL6 223 aa9.83□□□□□ -0.84
LIMS1-209ENST00000434274 FAM229AH3BQW9 127 aa9.83□□□□□ -0.84
LIMS1-209ENST00000434274 NTF3P20783 257 aa9.83□□□□□ -0.84
LIMS1-209ENST00000434274 XGP55808 180 aa9.83□□□□□ -0.84
LIMS1-209ENST00000434274 SSTP61278 116 aa9.83□□□□□ -0.84
LIMS1-209ENST00000434274 MPV17L2Q567V2 206 aa9.83□□□□□ -0.84
LIMS1-209ENST00000434274 FAM231DQ6ZW35 169 aa9.83□□□□□ -0.84
LIMS1-209ENST00000434274 C15orf54Q8N8G6 183 aa9.83□□□□□ -0.84
LIMS1-209ENST00000434274 BORCS7Q96B45 105 aa9.83□□□□□ -0.84
LIMS1-209ENST00000434274 KRTAP4-5Q9BYR2 181 aa9.83□□□□□ -0.84
LIMS1-209ENST00000434274 NIT2Q9NQR4 276 aa9.83□□□□□ -0.84
LIMS1-209ENST00000434274 LRP1BQ9NZR2 4599 aa9.82□□□□□ -0.84
LIMS1-209ENST00000434274 FUSP35637 526 aaKnown RBP eCLIP9.82□□□□□ -0.84
LIMS1-209ENST00000434274 TWIST1Q15672 202 aa9.82□□□□□ -0.84
LIMS1-209ENST00000434274 OCC1Q8TAD7 63 aa9.82□□□□□ -0.84
LIMS1-209ENST00000434274 FAM210AQ96ND0 272 aa9.82□□□□□ -0.84
LIMS1-209ENST00000434274 TMEM243Q9BU79 118 aa9.82□□□□□ -0.84
LIMS1-209ENST00000434274 COTL1Q14019 142 aa9.81□□□□□ -0.84
LIMS1-209ENST00000434274 EIF5A2Q9GZV4 153 aaKnown RBP9.81□□□□□ -0.84
LIMS1-209ENST00000434274 PRR34Q9NV39 138 aa9.81□□□□□ -0.84
LIMS1-209ENST00000434274 HSPG2P98160 4391 aa9.81□□□□□ -0.84
LIMS1-209ENST00000434274 A0A1B0GUV1 79 aa9.8□□□□□ -0.84
LIMS1-209ENST00000434274 K7EN84 100 aa9.8□□□□□ -0.84
LIMS1-209ENST00000434274 UBE2L6O14933 153 aa9.8□□□□□ -0.84
LIMS1-209ENST00000434274 GATCO43716 136 aaKnown RBP9.8□□□□□ -0.84
LIMS1-209ENST00000434274 Q5VSD8 79 aa9.8□□□□□ -0.84
LIMS1-209ENST00000434274 Q6ZSA8 131 aa9.8□□□□□ -0.84
LIMS1-209ENST00000434274 BAALCQ8WXS3 180 aa9.8□□□□□ -0.84
LIMS1-209ENST00000434274 SMIM7Q9BQ49 75 aa9.8□□□□□ -0.84
LIMS1-209ENST00000434274 RNASE7Q9H1E1 156 aaKnown RBP9.8□□□□□ -0.84
LIMS1-209ENST00000434274 TRAV8-4A0A0B4J246 113 aa9.79□□□□□ -0.84
LIMS1-209ENST00000434274 FAM231BA6NCW3 169 aa9.79□□□□□ -0.84
LIMS1-209ENST00000434274 LECT2O14960 151 aa9.79□□□□□ -0.84
LIMS1-209ENST00000434274 NCR2O95944 276 aa9.79□□□□□ -0.84
LIMS1-209ENST00000434274 NKX2-5P52952 324 aaPredicted RBP9.79□□□□□ -0.84
LIMS1-209ENST00000434274 RBX1P62877 108 aa9.79□□□□□ -0.84
LIMS1-209ENST00000434274 WFDC2Q14508 124 aa9.79□□□□□ -0.84
LIMS1-209ENST00000434274 NTM-AS1Q6ZSK4 140 aa9.79□□□□□ -0.84
LIMS1-209ENST00000434274 GFRA4Q9GZZ7 299 aa9.79□□□□□ -0.84
LIMS1-209ENST00000434274 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.78□□□□□ -0.84
LIMS1-209ENST00000434274 FAM74A3Q4VXF1 159 aa9.78□□□□□ -0.84
LIMS1-209ENST00000434274 ENHOQ6UWT2 76 aa9.78□□□□□ -0.84
LIMS1-209ENST00000434274 AMTP48728 403 aa9.77□□□□□ -0.85
LIMS1-209ENST00000434274 CEBPGP53567 150 aa9.77□□□□□ -0.85
LIMS1-209ENST00000434274 GAGE6Q13070 117 aa9.77□□□□□ -0.85
LIMS1-209ENST00000434274 ZNF727A8MUV8 499 aa9.76□□□□□ -0.85
LIMS1-209ENST00000434274 H7C423 109 aa9.76□□□□□ -0.85
LIMS1-209ENST00000434274 HLA-DQA1P01909 254 aa9.76□□□□□ -0.85
LIMS1-209ENST00000434274 PLA2G1BP04054 148 aaKnown RBP9.76□□□□□ -0.85
LIMS1-209ENST00000434274 FOXA3P55318 350 aaPredicted RBP9.76□□□□□ -0.85
LIMS1-209ENST00000434274 DGAT2L7PQ6IED9 249 aa9.76□□□□□ -0.85
LIMS1-209ENST00000434274 CLRN3Q8NCR9 226 aa9.76□□□□□ -0.85
LIMS1-209ENST00000434274 INAFM2P0DMQ5 153 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms