RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 UBR4Q5T4S7 5183 aa9.57□□□□□ -0.88
PRKDC-203ENST00000432581 SNAI2O43623 268 aa9.56□□□□□ -0.88
PRKDC-203ENST00000432581 S100A9P06702 114 aaKnown RBP9.56□□□□□ -0.88
PRKDC-203ENST00000432581 RBX1P62877 108 aa9.56□□□□□ -0.88
PRKDC-203ENST00000432581 SPANXN1Q5VSR9 72 aa9.56□□□□□ -0.88
PRKDC-203ENST00000432581 CLRN3Q8NCR9 226 aa9.56□□□□□ -0.88
PRKDC-203ENST00000432581 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.56□□□□□ -0.88
PRKDC-203ENST00000432581 PKHD1L1Q86WI1 4243 aa9.55□□□□□ -0.88
PRKDC-203ENST00000432581 TRBV25-1A0A075B6N4 114 aa9.55□□□□□ -0.88
PRKDC-203ENST00000432581 A0A0D9SG52 128 aa9.55□□□□□ -0.88
PRKDC-203ENST00000432581 F5H697 171 aa9.55□□□□□ -0.88
PRKDC-203ENST00000432581 OR5AL1P0C617 328 aa9.55□□□□□ -0.88
PRKDC-203ENST00000432581 KRTAP26-1Q6PEX3 210 aa9.55□□□□□ -0.88
PRKDC-203ENST00000432581 SDIM1Q6ZPB5 146 aa9.55□□□□□ -0.88
PRKDC-203ENST00000432581 NTM-AS1Q6ZSK4 140 aa9.55□□□□□ -0.88
PRKDC-203ENST00000432581 LINC00269Q8N2A0 174 aa9.55□□□□□ -0.88
PRKDC-203ENST00000432581 DERL1Q9BUN8 251 aa9.55□□□□□ -0.88
PRKDC-203ENST00000432581 SSBP4Q9BWG4 385 aaPredicted RBP9.55□□□□□ -0.88
PRKDC-203ENST00000432581 SMIM17P0DL12 118 aa9.54□□□□□ -0.88
PRKDC-203ENST00000432581 GAGE6Q13070 117 aa9.54□□□□□ -0.88
PRKDC-203ENST00000432581 CLPSL2Q6UWE3 100 aa9.54□□□□□ -0.88
PRKDC-203ENST00000432581 Q6ZRU5 148 aa9.54□□□□□ -0.88
PRKDC-203ENST00000432581 PANO1I0J062 215 aa9.53□□□□□ -0.88
PRKDC-203ENST00000432581 PAGE4O60829 102 aa9.53□□□□□ -0.88
PRKDC-203ENST00000432581 CNBPP62633 177 aaKnown RBP9.53□□□□□ -0.88
PRKDC-203ENST00000432581 CIRBPQ14011 172 aaKnown RBP9.53□□□□□ -0.88
PRKDC-203ENST00000432581 AP1S3Q96PC3 154 aa9.53□□□□□ -0.88
PRKDC-203ENST00000432581 MUC21A0A0G2JKD1 596 aa9.52□□□□□ -0.89
PRKDC-203ENST00000432581 MUC21A0A140T8X8 626 aa9.52□□□□□ -0.89
PRKDC-203ENST00000432581 MT1HL1P0DM35 61 aa9.52□□□□□ -0.89
PRKDC-203ENST00000432581 IQCJQ1A5X6 159 aa9.52□□□□□ -0.89
PRKDC-203ENST00000432581 BAGE2Q86Y30 109 aa9.52□□□□□ -0.89
PRKDC-203ENST00000432581 MLST8Q9BVC4 326 aa9.52□□□□□ -0.89
PRKDC-203ENST00000432581 TRAV8-4A0A0B4J246 113 aa9.51□□□□□ -0.89
PRKDC-203ENST00000432581 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
PRKDC-203ENST00000432581 P01737 135 aa9.51□□□□□ -0.89
PRKDC-203ENST00000432581 REG3AQ06141 175 aa9.51□□□□□ -0.89
PRKDC-203ENST00000432581 RGS21Q2M5E4 152 aa9.51□□□□□ -0.89
PRKDC-203ENST00000432581 RNF185Q96GF1 192 aa9.51□□□□□ -0.89
PRKDC-203ENST00000432581 CYTL1Q9NRR1 136 aa9.51□□□□□ -0.89
PRKDC-203ENST00000432581 KIF25-AS1Q9Y6Z4 181 aa9.51□□□□□ -0.89
PRKDC-203ENST00000432581 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.5□□□□□ -0.89
PRKDC-203ENST00000432581 SCO2A0A1W2PP80 73 aa9.5□□□□□ -0.89
PRKDC-203ENST00000432581 hDV102S1A0JD36 115 aa9.5□□□□□ -0.89
PRKDC-203ENST00000432581 H7C1H1 209 aa9.5□□□□□ -0.89
PRKDC-203ENST00000432581 PFDN1O60925 122 aa9.5□□□□□ -0.89
PRKDC-203ENST00000432581 AP5S1Q9NUS5 200 aa9.5□□□□□ -0.89
PRKDC-203ENST00000432581 IGLV10-54A0A075B6I4 117 aa9.49□□□□□ -0.89
PRKDC-203ENST00000432581 IGHV3-64A0A075B6Q5 118 aa9.49□□□□□ -0.89
PRKDC-203ENST00000432581 ARPC5O15511 151 aa9.49□□□□□ -0.89
PRKDC-203ENST00000432581 SSTP61278 116 aa9.49□□□□□ -0.89
PRKDC-203ENST00000432581 SFT2D1Q8WV19 159 aa9.49□□□□□ -0.89
PRKDC-203ENST00000432581 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
PRKDC-203ENST00000432581 A0A1B0GUV1 79 aa9.48□□□□□ -0.89
PRKDC-203ENST00000432581 GZMBP10144 247 aa9.48□□□□□ -0.89
PRKDC-203ENST00000432581 MBD3L1Q8WWY6 194 aa9.48□□□□□ -0.89
PRKDC-203ENST00000432581 UMAD1C9J7I0 102 aa9.47□□□□□ -0.89
PRKDC-203ENST00000432581 G3V3Q6 166 aa9.47□□□□□ -0.89
PRKDC-203ENST00000432581 M0QY20 66 aa9.47□□□□□ -0.89
PRKDC-203ENST00000432581 TMUB2Q71RG4 321 aa9.47□□□□□ -0.89
PRKDC-203ENST00000432581 C20orf203Q8NBC4 194 aa9.47□□□□□ -0.89
PRKDC-203ENST00000432581 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
PRKDC-203ENST00000432581 A0A087WYN8 130 aa9.46□□□□□ -0.9
PRKDC-203ENST00000432581 MGPP08493 103 aa9.46□□□□□ -0.9
PRKDC-203ENST00000432581 Q6ZNX1 250 aa9.46□□□□□ -0.9
PRKDC-203ENST00000432581 FAM213BQ8TBF2 198 aa9.46□□□□□ -0.9
PRKDC-203ENST00000432581 SPACA4Q8TDM5 124 aa9.46□□□□□ -0.9
PRKDC-203ENST00000432581 A0A1B0GV50 99 aa9.45□□□□□ -0.9
PRKDC-203ENST00000432581 SUMO4Q6EEV6 95 aa9.45□□□□□ -0.9
PRKDC-203ENST00000432581 WDR73Q6P4I2 378 aa9.45□□□□□ -0.9
PRKDC-203ENST00000432581 KCNRGQ8N5I3 272 aa9.45□□□□□ -0.9
PRKDC-203ENST00000432581 FER1L6-AS1Q8NA97 138 aa9.45□□□□□ -0.9
PRKDC-203ENST00000432581 TPPP3Q9BW30 176 aa9.45□□□□□ -0.9
PRKDC-203ENST00000432581 IGLV4-60A0A075B6I1 120 aa9.44□□□□□ -0.9
PRKDC-203ENST00000432581 SLPIP03973 132 aa9.44□□□□□ -0.9
PRKDC-203ENST00000432581 RPL35P42766 123 aaKnown RBP9.44□□□□□ -0.9
PRKDC-203ENST00000432581 NKX2-5P52952 324 aaPredicted RBP9.44□□□□□ -0.9
PRKDC-203ENST00000432581 RPS20P60866 119 aaKnown RBP9.44□□□□□ -0.9
PRKDC-203ENST00000432581 CACNG7P62955 275 aa9.44□□□□□ -0.9
PRKDC-203ENST00000432581 C7orf33Q8WU49 177 aa9.44□□□□□ -0.9
PRKDC-203ENST00000432581 PGLYRP4Q96LB8 373 aa9.44□□□□□ -0.9
PRKDC-203ENST00000432581 PLAC8Q9NZF1 115 aa9.44□□□□□ -0.9
PRKDC-203ENST00000432581 UBE2L6O14933 153 aa9.43□□□□□ -0.9
PRKDC-203ENST00000432581 IGLC6P0CF74 106 aa9.43□□□□□ -0.9
PRKDC-203ENST00000432581 CHTF8P0CG12 524 aa9.43□□□□□ -0.9
PRKDC-203ENST00000432581 ZNF345Q14585 488 aa9.43□□□□□ -0.9
PRKDC-203ENST00000432581 CFAP161Q6P656 301 aa9.43□□□□□ -0.9
PRKDC-203ENST00000432581 RASL11AQ6T310 242 aa9.43□□□□□ -0.9
PRKDC-203ENST00000432581 GFRA4Q9GZZ7 299 aa9.43□□□□□ -0.9
PRKDC-203ENST00000432581 DPH3P1Q9H4G8 78 aa9.43□□□□□ -0.9
PRKDC-203ENST00000432581 A0A1B0GVG6 124 aa9.42□□□□□ -0.9
PRKDC-203ENST00000432581 H2AFB1P0C5Y9 115 aa9.42□□□□□ -0.9
PRKDC-203ENST00000432581 SULT1A2P50226 295 aa9.42□□□□□ -0.9
PRKDC-203ENST00000432581 RAB5CP51148 216 aa9.42□□□□□ -0.9
PRKDC-203ENST00000432581 OR2D3Q8NGH3 330 aa9.42□□□□□ -0.9
PRKDC-203ENST00000432581 XKRY2A2RUG3 117 aa9.41□□□□□ -0.9
PRKDC-203ENST00000432581 F2Z2F3 143 aa9.41□□□□□ -0.9
PRKDC-203ENST00000432581 PHOX2AO14813 284 aa9.41□□□□□ -0.9
PRKDC-203ENST00000432581 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
PRKDC-203ENST00000432581 COTL1Q14019 142 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms