RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 BAGE2Q86Y30 109 aa9.68□□□□□ -0.86
MSH5-208ENST00000429846 SFT2D1Q8WV19 159 aa9.68□□□□□ -0.86
MSH5-208ENST00000429846 OXTP01178 125 aa9.67□□□□□ -0.86
MSH5-208ENST00000429846 HLA-DQA1P01909 254 aa9.67□□□□□ -0.86
MSH5-208ENST00000429846 SMIM17P0DL12 118 aa9.67□□□□□ -0.86
MSH5-208ENST00000429846 SERTAD4-AS1Q5TG53 156 aa9.67□□□□□ -0.86
MSH5-208ENST00000429846 KCNRGQ8N5I3 272 aa9.67□□□□□ -0.86
MSH5-208ENST00000429846 FAM213BQ8TBF2 198 aa9.67□□□□□ -0.86
MSH5-208ENST00000429846 AP1S3Q96PC3 154 aa9.67□□□□□ -0.86
MSH5-208ENST00000429846 USP17L23D6RBM5 183 aa9.66□□□□□ -0.86
MSH5-208ENST00000429846 F5H697 171 aa9.66□□□□□ -0.86
MSH5-208ENST00000429846 RGS21Q2M5E4 152 aa9.66□□□□□ -0.86
MSH5-208ENST00000429846 DGAT2L7PQ6IED9 249 aa9.66□□□□□ -0.86
MSH5-208ENST00000429846 PRR34Q9NV39 138 aa9.66□□□□□ -0.86
MSH5-208ENST00000429846 TRBV25-1A0A075B6N4 114 aa9.65□□□□□ -0.86
MSH5-208ENST00000429846 H2AFB1P0C5Y9 115 aa9.64□□□□□ -0.87
MSH5-208ENST00000429846 NTM-AS1Q6ZSK4 140 aa9.64□□□□□ -0.87
MSH5-208ENST00000429846 TMUB2Q71RG4 321 aa9.64□□□□□ -0.87
MSH5-208ENST00000429846 DERL1Q9BUN8 251 aa9.64□□□□□ -0.87
MSH5-208ENST00000429846 KIF25-AS1Q9Y6Z4 181 aa9.64□□□□□ -0.87
MSH5-208ENST00000429846 A0A0D9SG52 128 aa9.63□□□□□ -0.87
MSH5-208ENST00000429846 MUC21A0A0G2JKD1 596 aa9.63□□□□□ -0.87
MSH5-208ENST00000429846 MUC21A0A140T8X8 626 aa9.63□□□□□ -0.87
MSH5-208ENST00000429846 A0A1B0GV50 99 aa9.63□□□□□ -0.87
MSH5-208ENST00000429846 H7C1H1 209 aa9.63□□□□□ -0.87
MSH5-208ENST00000429846 RBX1P62877 108 aa9.63□□□□□ -0.87
MSH5-208ENST00000429846 EIF5AP63241 154 aaKnown RBP9.63□□□□□ -0.87
MSH5-208ENST00000429846 IQCJQ1A5X6 159 aa9.63□□□□□ -0.87
MSH5-208ENST00000429846 C9orf163Q8N9P6 203 aa9.63□□□□□ -0.87
MSH5-208ENST00000429846 KANTRA0A1W2PQU2 76 aa9.62□□□□□ -0.87
MSH5-208ENST00000429846 HMSDA8MTL9 139 aa9.62□□□□□ -0.87
MSH5-208ENST00000429846 SMLR1H3BR10 107 aa9.62□□□□□ -0.87
MSH5-208ENST00000429846 BCL2L11O43521 198 aa9.62□□□□□ -0.87
MSH5-208ENST00000429846 PRSS1P07477 247 aa9.62□□□□□ -0.87
MSH5-208ENST00000429846 RPL35P42766 123 aaKnown RBP9.62□□□□□ -0.87
MSH5-208ENST00000429846 RPL37AP61513 92 aaKnown RBP9.62□□□□□ -0.87
MSH5-208ENST00000429846 LINC00269Q8N2A0 174 aa9.62□□□□□ -0.87
MSH5-208ENST00000429846 MANBALQ9NQG1 85 aa9.62□□□□□ -0.87
MSH5-208ENST00000429846 IGHV1-24A0A0C4DH33 117 aa9.61□□□□□ -0.87
MSH5-208ENST00000429846 RPS20P60866 119 aaKnown RBP9.61□□□□□ -0.87
MSH5-208ENST00000429846 GAGE6Q13070 117 aa9.61□□□□□ -0.87
MSH5-208ENST00000429846 CLRN3Q8NCR9 226 aa9.61□□□□□ -0.87
MSH5-208ENST00000429846 C11orf52Q96A22 123 aa9.61□□□□□ -0.87
MSH5-208ENST00000429846 M0QY20 66 aa9.6□□□□□ -0.87
MSH5-208ENST00000429846 SSTP61278 116 aa9.6□□□□□ -0.87
MSH5-208ENST00000429846 KRTAP26-1Q6PEX3 210 aa9.6□□□□□ -0.87
MSH5-208ENST00000429846 CLPSL2Q6UWE3 100 aa9.6□□□□□ -0.87
MSH5-208ENST00000429846 FER1L6-AS1Q8NA97 138 aa9.6□□□□□ -0.87
MSH5-208ENST00000429846 SMIM12Q96EX1 92 aa9.6□□□□□ -0.87
MSH5-208ENST00000429846 TRAV8-4A0A0B4J246 113 aa9.59□□□□□ -0.87
MSH5-208ENST00000429846 P01737 135 aa9.59□□□□□ -0.87
MSH5-208ENST00000429846 MGPP08493 103 aa9.59□□□□□ -0.87
MSH5-208ENST00000429846 IGLC6P0CF74 106 aa9.59□□□□□ -0.87
MSH5-208ENST00000429846 CACNG7P62955 275 aa9.59□□□□□ -0.87
MSH5-208ENST00000429846 REG3AQ06141 175 aa9.59□□□□□ -0.87
MSH5-208ENST00000429846 DAZAP1Q96EP5 407 aaKnown RBP9.59□□□□□ -0.87
MSH5-208ENST00000429846 A0A1B0GUV1 79 aa9.58□□□□□ -0.88
MSH5-208ENST00000429846 XKRY2A2RUG3 117 aa9.58□□□□□ -0.88
MSH5-208ENST00000429846 CNBPP62633 177 aaKnown RBP9.58□□□□□ -0.88
MSH5-208ENST00000429846 CENPWQ5EE01 88 aa9.58□□□□□ -0.88
MSH5-208ENST00000429846 TPPP3Q9BW30 176 aa9.58□□□□□ -0.88
MSH5-208ENST00000429846 GNG13Q9P2W3 67 aa9.58□□□□□ -0.88
MSH5-208ENST00000429846 LRP1Q07954 4544 aaKnown RBP9.57□□□□□ -0.88
MSH5-208ENST00000429846 TRAV1-1A0A0B4J248 108 aa9.57□□□□□ -0.88
MSH5-208ENST00000429846 C19orf71A6NCJ1 209 aa9.57□□□□□ -0.88
MSH5-208ENST00000429846 F2Z2F3 143 aa9.57□□□□□ -0.88
MSH5-208ENST00000429846 TRGC1P0CF51 173 aa9.57□□□□□ -0.88
MSH5-208ENST00000429846 GZMBP10144 247 aa9.57□□□□□ -0.88
MSH5-208ENST00000429846 SUMO4Q6EEV6 95 aa9.57□□□□□ -0.88
MSH5-208ENST00000429846 SDIM1Q6ZPB5 146 aa9.57□□□□□ -0.88
MSH5-208ENST00000429846 OR2D3Q8NGH3 330 aa9.57□□□□□ -0.88
MSH5-208ENST00000429846 PGLYRP4Q96LB8 373 aa9.57□□□□□ -0.88
MSH5-208ENST00000429846 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.57□□□□□ -0.88
MSH5-208ENST00000429846 TEX46H3BTG2 121 aa9.56□□□□□ -0.88
MSH5-208ENST00000429846 RAB5CP51148 216 aa9.56□□□□□ -0.88
MSH5-208ENST00000429846 CCL20P78556 96 aa9.56□□□□□ -0.88
MSH5-208ENST00000429846 CIRBPQ14011 172 aaKnown RBP9.56□□□□□ -0.88
MSH5-208ENST00000429846 RASL11AQ6T310 242 aa9.56□□□□□ -0.88
MSH5-208ENST00000429846 C20orf203Q8NBC4 194 aa9.56□□□□□ -0.88
MSH5-208ENST00000429846 TMEM243Q9BU79 118 aa9.56□□□□□ -0.88
MSH5-208ENST00000429846 BIN3Q9NQY0 253 aa9.56□□□□□ -0.88
MSH5-208ENST00000429846 IGLV10-54A0A075B6I4 117 aa9.55□□□□□ -0.88
MSH5-208ENST00000429846 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.55□□□□□ -0.88
MSH5-208ENST00000429846 hDV102S1A0JD36 115 aa9.55□□□□□ -0.88
MSH5-208ENST00000429846 GNG4P50150 75 aa9.55□□□□□ -0.88
MSH5-208ENST00000429846 DPH3P1Q9H4G8 78 aa9.55□□□□□ -0.88
MSH5-208ENST00000429846 PDE6DO43924 150 aa9.54□□□□□ -0.88
MSH5-208ENST00000429846 NKX2-5P52952 324 aaPredicted RBP9.54□□□□□ -0.88
MSH5-208ENST00000429846 MEF2BQ02080 365 aaPredicted RBP9.54□□□□□ -0.88
MSH5-208ENST00000429846 EIF5AL1Q6IS14 154 aaKnown RBP9.54□□□□□ -0.88
MSH5-208ENST00000429846 NIT2Q9NQR4 276 aa9.54□□□□□ -0.88
MSH5-208ENST00000429846 AP5S1Q9NUS5 200 aa9.54□□□□□ -0.88
MSH5-208ENST00000429846 PLA2G2DQ9UNK4 145 aa9.54□□□□□ -0.88
MSH5-208ENST00000429846 IGHV3-64A0A075B6Q5 118 aa9.53□□□□□ -0.88
MSH5-208ENST00000429846 HNRNPA3P51991 378 aaKnown RBP9.53□□□□□ -0.88
MSH5-208ENST00000429846 WDR73Q6P4I2 378 aa9.53□□□□□ -0.88
MSH5-208ENST00000429846 RNF185Q96GF1 192 aa9.53□□□□□ -0.88
MSH5-208ENST00000429846 HMCN2Q8NDA2 5059 aa9.52□□□□□ -0.89
MSH5-208ENST00000429846 IGLV4-60A0A075B6I1 120 aa9.52□□□□□ -0.89
MSH5-208ENST00000429846 PANO1I0J062 215 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms