RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 PRSS29PA6NIE9 313 aa6.27□□□□□ -1.41
HDAC1-202ENST00000428704 F6UB75 175 aa6.27□□□□□ -1.41
HDAC1-202ENST00000428704 TNFRSF6BO95407 300 aa6.27□□□□□ -1.41
HDAC1-202ENST00000428704 NPYP01303 97 aa6.27□□□□□ -1.41
HDAC1-202ENST00000428704 TSPOP30536 169 aa6.27□□□□□ -1.41
HDAC1-202ENST00000428704 RNASE4P34096 147 aaKnown RBP6.27□□□□□ -1.41
HDAC1-202ENST00000428704 SPANXN1Q5VSR9 72 aa6.27□□□□□ -1.41
HDAC1-202ENST00000428704 FOXI2Q6ZQN5 318 aa6.27□□□□□ -1.41
HDAC1-202ENST00000428704 MAP1LC3AQ9H492 121 aa6.27□□□□□ -1.41
HDAC1-202ENST00000428704 IGLV2-18A0A075B6J9 118 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 MUC21A0A0G2JKD1 596 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 A0A0J9YWU9 116 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 MUC21A0A140T8X8 626 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 C7orf71A4D174 169 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 K7EMI3 77 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 M0R381 172 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 PPP1R17O96001 155 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 PLA2G1BP04054 148 aaKnown RBP6.26□□□□□ -1.41
HDAC1-202ENST00000428704 IGLC3P0DOY3 106 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 RNASE3P12724 160 aaKnown RBP6.26□□□□□ -1.41
HDAC1-202ENST00000428704 EVI2AP22794 236 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 RBMY1FQ15415 496 aaKnown RBP6.26□□□□□ -1.41
HDAC1-202ENST00000428704 MUC21Q5SSG8 566 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 FAM159AQ6UWV7 190 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 Q6ZQT7 251 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 Q8N8P6 123 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 CLUHP3Q96NS8 147 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 C2orf88Q9BSF0 95 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 MAP6D1Q9H9H5 199 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 PAM16Q9Y3D7 125 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 LRP1BQ9NZR2 4599 aa6.26□□□□□ -1.41
HDAC1-202ENST00000428704 IGKV3-7A0A075B6H7 116 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 H3BVH4 76 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 HBDP02042 147 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 S100A4P26447 101 aaKnown RBP6.25□□□□□ -1.41
HDAC1-202ENST00000428704 FCER1GP30273 86 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 CDKN1BP46527 198 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 TFPI2P48307 235 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 DEFB1P60022 68 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 SPATA45Q537H7 98 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 PSMG4Q5JS54 123 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 AMTNQ6UX39 209 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 LINC00173Q6ZV60 143 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 NRACQ8N912 160 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 PHLDA1Q8WV24 401 aaPredicted RBP6.25□□□□□ -1.41
HDAC1-202ENST00000428704 RNF183Q96D59 192 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 C20orf78Q9BR46 151 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 OVOL2Q9BRP0 275 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 DPH3P1Q9H4G8 78 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 UQCR10Q9UDW1 63 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 PHLDA3Q9Y5J5 127 aa6.25□□□□□ -1.41
HDAC1-202ENST00000428704 LOC389332A0A1B0GUA5 103 aa6.24□□□□□ -1.41
HDAC1-202ENST00000428704 GNRH2O43555 120 aa6.24□□□□□ -1.41
HDAC1-202ENST00000428704 ZNF688P0C7X2 276 aa6.24□□□□□ -1.41
HDAC1-202ENST00000428704 SSTP61278 116 aa6.24□□□□□ -1.41
HDAC1-202ENST00000428704 RPL32P62910 135 aaKnown RBP6.24□□□□□ -1.41
HDAC1-202ENST00000428704 LGALS9BQ3B8N2 356 aa6.24□□□□□ -1.41
HDAC1-202ENST00000428704 ZNF705AQ6ZN79 300 aaPredicted RBP6.24□□□□□ -1.41
HDAC1-202ENST00000428704 C9orf85Q96MD7 179 aa6.24□□□□□ -1.41
HDAC1-202ENST00000428704 ST20Q9HBF5 79 aa6.24□□□□□ -1.41
HDAC1-202ENST00000428704 KIF25-AS1Q9Y6Z4 181 aa6.24□□□□□ -1.41
HDAC1-202ENST00000428704 APOBP04114 4563 aaKnown RBP6.24□□□□□ -1.41
HDAC1-202ENST00000428704 AGRNO00468 2067 aa6.23□□□□□ -1.41
HDAC1-202ENST00000428704 SMKR1H3BMG3 65 aa6.23□□□□□ -1.41
HDAC1-202ENST00000428704 M0R143 59 aa6.23□□□□□ -1.41
HDAC1-202ENST00000428704 RPL35AP18077 110 aaKnown RBP6.23□□□□□ -1.41
HDAC1-202ENST00000428704 APOC4P55056 127 aa6.23□□□□□ -1.41
HDAC1-202ENST00000428704 LINC00315P59091 139 aa6.23□□□□□ -1.41
HDAC1-202ENST00000428704 DEFB135Q30KP9 77 aa6.23□□□□□ -1.41
HDAC1-202ENST00000428704 KIR2DL5BQ8NHK3 375 aa6.23□□□□□ -1.41
HDAC1-202ENST00000428704 AP1S3Q96PC3 154 aa6.23□□□□□ -1.41
HDAC1-202ENST00000428704 LINC00467Q9BRT7 94 aa6.23□□□□□ -1.41
HDAC1-202ENST00000428704 TP53TG1Q9Y2A0 90 aa6.23□□□□□ -1.41
HDAC1-202ENST00000428704 MRPS16Q9Y3D3 137 aaKnown RBP6.23□□□□□ -1.41
HDAC1-202ENST00000428704 IGHV1OR15-1A0A075B7D0 117 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 IGHV3-16A0A0C4DH30 117 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 H3BMM0 161 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 J3KRW8 73 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 ZNF561-AS1K7EIQ3 104 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 GAS8-AS1O95177 125 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 NCR2O95944 276 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 HLA-DRB4P13762 266 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 DEFB131AP59861 70 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 PIK3CD-AS1Q5SR53 167 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 Q8N1X5 172 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 PTH2Q96A98 100 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 IFI27L1Q96BM0 104 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 HLA-DRB4X5D2U9 266 aa6.22□□□□□ -1.41
HDAC1-202ENST00000428704 TRGV11A0A075B6L2 103 aa6.21□□□□□ -1.42
HDAC1-202ENST00000428704 TRAV12-3A0A0B4J271 114 aa6.21□□□□□ -1.42
HDAC1-202ENST00000428704 LINC01549A6NIU2 74 aa6.21□□□□□ -1.42
HDAC1-202ENST00000428704 HSBP1L1C9JCN9 74 aa6.21□□□□□ -1.42
HDAC1-202ENST00000428704 SPRY2O43597 315 aa6.21□□□□□ -1.42
HDAC1-202ENST00000428704 CDK2AP2O75956 126 aa6.21□□□□□ -1.42
HDAC1-202ENST00000428704 ATP5LO75964 103 aa6.21□□□□□ -1.42
HDAC1-202ENST00000428704 GATA1P15976 413 aaPredicted RBP6.21□□□□□ -1.42
HDAC1-202ENST00000428704 CMC4P56277 68 aaPredicted RBP6.21□□□□□ -1.42
HDAC1-202ENST00000428704 LAGE3Q14657 143 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms