RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TRBV20OR9-2A0A075B6H5 130 aa12.15□□□□□ -0.46
PSPC1-202ENST00000427943 C19orf71A6NCJ1 209 aa12.15□□□□□ -0.46
PSPC1-202ENST00000427943 PDE6DO43924 150 aa12.15□□□□□ -0.46
PSPC1-202ENST00000427943 SMIM17P0DL12 118 aa12.15□□□□□ -0.46
PSPC1-202ENST00000427943 BCL2P10415 239 aa12.15□□□□□ -0.46
PSPC1-202ENST00000427943 FER1L6-AS1Q8NA97 138 aa12.15□□□□□ -0.46
PSPC1-202ENST00000427943 CHCHD7Q9BUK0 85 aa12.15□□□□□ -0.46
PSPC1-202ENST00000427943 MED9Q9NWA0 146 aa12.15□□□□□ -0.46
PSPC1-202ENST00000427943 FAM30AQ9NZY2 134 aa12.15□□□□□ -0.46
PSPC1-202ENST00000427943 TMEM262E9PQX1 116 aa12.14□□□□□ -0.47
PSPC1-202ENST00000427943 MGPP08493 103 aa12.14□□□□□ -0.47
PSPC1-202ENST00000427943 IGLC6P0CF74 106 aa12.14□□□□□ -0.47
PSPC1-202ENST00000427943 COX11Q9Y6N1 276 aa12.14□□□□□ -0.47
PSPC1-202ENST00000427943 hCG_2014768A0A024R1R8 64 aa12.13□□□□□ -0.47
PSPC1-202ENST00000427943 RPS20P60866 119 aaKnown RBP12.13□□□□□ -0.47
PSPC1-202ENST00000427943 ELOBQ15370 118 aa12.13□□□□□ -0.47
PSPC1-202ENST00000427943 MPV17L2Q567V2 206 aa12.13□□□□□ -0.47
PSPC1-202ENST00000427943 P01737 135 aa12.12□□□□□ -0.47
PSPC1-202ENST00000427943 INAFM2P0DMQ5 153 aa12.12□□□□□ -0.47
PSPC1-202ENST00000427943 Q6ZNX1 250 aa12.12□□□□□ -0.47
PSPC1-202ENST00000427943 C15orf54Q8N8G6 183 aa12.12□□□□□ -0.47
PSPC1-202ENST00000427943 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.12□□□□□ -0.47
PSPC1-202ENST00000427943 SMIM12Q96EX1 92 aa12.12□□□□□ -0.47
PSPC1-202ENST00000427943 CHCHD5Q9BSY4 110 aa12.12□□□□□ -0.47
PSPC1-202ENST00000427943 VAX2Q9UIW0 290 aa12.12□□□□□ -0.47
PSPC1-202ENST00000427943 LINC01620Q4KN68 170 aa12.11□□□□□ -0.47
PSPC1-202ENST00000427943 NTM-AS1Q6ZSK4 140 aa12.11□□□□□ -0.47
PSPC1-202ENST00000427943 VPS13BQ7Z7G8 4022 aa12.1□□□□□ -0.47
PSPC1-202ENST00000427943 ANGP03950 147 aaKnown RBP12.1□□□□□ -0.47
PSPC1-202ENST00000427943 ATRAIDQ6UW56 229 aa12.1□□□□□ -0.47
PSPC1-202ENST00000427943 ENHOQ6UWT2 76 aa12.1□□□□□ -0.47
PSPC1-202ENST00000427943 AKAP14Q86UN6 197 aa12.1□□□□□ -0.47
PSPC1-202ENST00000427943 C9orf62Q8N4C0 152 aa12.1□□□□□ -0.47
PSPC1-202ENST00000427943 Q8N976 141 aa12.1□□□□□ -0.47
PSPC1-202ENST00000427943 XKRY2A2RUG3 117 aa12.09□□□□□ -0.47
PSPC1-202ENST00000427943 CRPP02741 224 aa12.09□□□□□ -0.47
PSPC1-202ENST00000427943 CACNG7P62955 275 aa12.09□□□□□ -0.47
PSPC1-202ENST00000427943 Q0VG73 95 aa12.09□□□□□ -0.47
PSPC1-202ENST00000427943 SUMO4Q6EEV6 95 aa12.09□□□□□ -0.47
PSPC1-202ENST00000427943 M0QY20 66 aa12.08□□□□□ -0.48
PSPC1-202ENST00000427943 LYZL1Q6UWQ5 148 aa12.08□□□□□ -0.48
PSPC1-202ENST00000427943 C1orf43Q9BWL3 253 aa12.08□□□□□ -0.48
PSPC1-202ENST00000427943 FAT1Q14517 4588 aa12.08□□□□□ -0.48
PSPC1-202ENST00000427943 FAM229AH3BQW9 127 aa12.07□□□□□ -0.48
PSPC1-202ENST00000427943 GAGE6Q13070 117 aa12.07□□□□□ -0.48
PSPC1-202ENST00000427943 TMEM97Q5BJF2 176 aa12.07□□□□□ -0.48
PSPC1-202ENST00000427943 CLPSL2Q6UWE3 100 aa12.07□□□□□ -0.48
PSPC1-202ENST00000427943 ALKAL2Q6UX46 152 aa12.07□□□□□ -0.48
PSPC1-202ENST00000427943 Q6ZSA8 131 aa12.07□□□□□ -0.48
PSPC1-202ENST00000427943 NUDT10Q8NFP7 164 aa12.07□□□□□ -0.48
PSPC1-202ENST00000427943 NUDT11Q96G61 164 aa12.07□□□□□ -0.48
PSPC1-202ENST00000427943 BIN3Q9NQY0 253 aa12.07□□□□□ -0.48
PSPC1-202ENST00000427943 F2Z2F3 143 aa12.06□□□□□ -0.48
PSPC1-202ENST00000427943 H7C1H1 209 aa12.06□□□□□ -0.48
PSPC1-202ENST00000427943 TAGLN2P37802 199 aaKnown RBP12.06□□□□□ -0.48
PSPC1-202ENST00000427943 PKIAP61925 76 aa12.06□□□□□ -0.48
PSPC1-202ENST00000427943 RNASE7Q9H1E1 156 aaKnown RBP12.06□□□□□ -0.48
PSPC1-202ENST00000427943 SRRM2Q9UQ35 2752 aaKnown RBP12.06□□□□□ -0.48
PSPC1-202ENST00000427943 TRBV25-1A0A075B6N4 114 aa12.05□□□□□ -0.48
PSPC1-202ENST00000427943 K7EN84 100 aa12.05□□□□□ -0.48
PSPC1-202ENST00000427943 HLA-DQA1P01909 254 aa12.05□□□□□ -0.48
PSPC1-202ENST00000427943 TRGC1P0CF51 173 aa12.05□□□□□ -0.48
PSPC1-202ENST00000427943 NTF3P20783 257 aa12.05□□□□□ -0.48
PSPC1-202ENST00000427943 NKX2-5P52952 324 aaPredicted RBP12.05□□□□□ -0.48
PSPC1-202ENST00000427943 DPH3P1Q9H4G8 78 aa12.05□□□□□ -0.48
PSPC1-202ENST00000427943 IGHV1-24A0A0C4DH33 117 aa12.04□□□□□ -0.48
PSPC1-202ENST00000427943 CTRLP40313 264 aa12.04□□□□□ -0.48
PSPC1-202ENST00000427943 RBX1P62877 108 aa12.04□□□□□ -0.48
PSPC1-202ENST00000427943 RASL11AQ6T310 242 aa12.04□□□□□ -0.48
PSPC1-202ENST00000427943 RPP21Q9H633 154 aaKnown RBP12.04□□□□□ -0.48
PSPC1-202ENST00000427943 IQCJQ1A5X6 159 aa12.03□□□□□ -0.48
PSPC1-202ENST00000427943 OCC1Q8TAD7 63 aa12.03□□□□□ -0.48
PSPC1-202ENST00000427943 DEFB104AQ8WTQ1 72 aa12.03□□□□□ -0.48
PSPC1-202ENST00000427943 MIAQ16674 131 aa12.02□□□□□ -0.49
PSPC1-202ENST00000427943 FLG2Q5D862 2391 aaPredicted RBP12.02□□□□□ -0.49
PSPC1-202ENST00000427943 DNAH8Q96JB1 4490 aa12.02□□□□□ -0.49
PSPC1-202ENST00000427943 USP17L23D6RBM5 183 aa12.01□□□□□ -0.49
PSPC1-202ENST00000427943 BLOC1S1P78537 153 aa12.01□□□□□ -0.49
PSPC1-202ENST00000427943 TWIST1Q15672 202 aa12.01□□□□□ -0.49
PSPC1-202ENST00000427943 LINC00269Q8N2A0 174 aa12.01□□□□□ -0.49
PSPC1-202ENST00000427943 PRR34Q9NV39 138 aa12.01□□□□□ -0.49
PSPC1-202ENST00000427943 CEBPGP53567 150 aa12□□□□□ -0.49
PSPC1-202ENST00000427943 C14orf177Q52M58 125 aa12□□□□□ -0.49
PSPC1-202ENST00000427943 SCXQ7RTU7 201 aa12□□□□□ -0.49
PSPC1-202ENST00000427943 NIT2Q9NQR4 276 aa12□□□□□ -0.49
PSPC1-202ENST00000427943 WDR73Q6P4I2 378 aa11.99□□□□□ -0.49
PSPC1-202ENST00000427943 LINC00528Q8N1L1 170 aa11.99□□□□□ -0.49
PSPC1-202ENST00000427943 TMEM243Q9BU79 118 aa11.99□□□□□ -0.49
PSPC1-202ENST00000427943 CNFNQ9BYD5 112 aa11.99□□□□□ -0.49
PSPC1-202ENST00000427943 TRAV26-2A0A0B4J265 109 aa11.98□□□□□ -0.49
PSPC1-202ENST00000427943 TMEM250H0YL14 139 aa11.98□□□□□ -0.49
PSPC1-202ENST00000427943 C20orf203Q8NBC4 194 aa11.98□□□□□ -0.49
PSPC1-202ENST00000427943 GTSF1Q8WW33 167 aa11.98□□□□□ -0.49
PSPC1-202ENST00000427943 DMBT1Q9UGM3 2413 aaPredicted RBP11.97□□□□□ -0.49
PSPC1-202ENST00000427943 IGLV10-54A0A075B6I4 117 aa11.97□□□□□ -0.49
PSPC1-202ENST00000427943 REG3AQ06141 175 aa11.97□□□□□ -0.49
PSPC1-202ENST00000427943 KRTAP26-1Q6PEX3 210 aa11.97□□□□□ -0.49
PSPC1-202ENST00000427943 LYPD6BQ8NI32 183 aa11.97□□□□□ -0.49
PSPC1-202ENST00000427943 PGLYRP4Q96LB8 373 aa11.97□□□□□ -0.49
PSPC1-202ENST00000427943 IGLV4-60A0A075B6I1 120 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms