RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 TMEM131Q92545 1883 aa10.03□□□□□ -0.8
SPG11-202ENST00000427534 FUSP35637 526 aaKnown RBP eCLIP10.03□□□□□ -0.8
SPG11-202ENST00000427534 DCANP1Q8TF63 244 aa10.03□□□□□ -0.8
SPG11-202ENST00000427534 PPDPFQ9H3Y8 114 aa10.03□□□□□ -0.8
SPG11-202ENST00000427534 DAZAP2Q15038 168 aaPredicted RBP10.03□□□□□ -0.8
SPG11-202ENST00000427534 RETNQ9HD89 108 aa10.03□□□□□ -0.8
SPG11-202ENST00000427534 IGHG2P01859 326 aa10.02□□□□□ -0.8
SPG11-202ENST00000427534 RBM3P98179 157 aaKnown RBP10.02□□□□□ -0.8
SPG11-202ENST00000427534 IGKV2D-26A0A0A0MRZ7 120 aa10.02□□□□□ -0.81
SPG11-202ENST00000427534 NCOA6Q14686 2063 aaPredicted RBP10.02□□□□□ -0.81
SPG11-202ENST00000427534 IGF1P05019 195 aa10.02□□□□□ -0.81
SPG11-202ENST00000427534 A0A1W2PPM0 123 aa10.02□□□□□ -0.81
SPG11-202ENST00000427534 ANKRD29Q8N6D5 301 aa10.02□□□□□ -0.81
SPG11-202ENST00000427534 NPSP0C0P6 89 aa10.02□□□□□ -0.81
SPG11-202ENST00000427534 ODF3L1Q8IXM7 274 aa10.02□□□□□ -0.81
SPG11-202ENST00000427534 A6NDX4 124 aa10.01□□□□□ -0.81
SPG11-202ENST00000427534 IGLV2-14P01704 120 aa10.01□□□□□ -0.81
SPG11-202ENST00000427534 IGKV1D-37A0A075B6S9 117 aa10.01□□□□□ -0.81
SPG11-202ENST00000427534 PROK1P58294 105 aa10.01□□□□□ -0.81
SPG11-202ENST00000427534 ZNF747Q9BV97 191 aa10.01□□□□□ -0.81
SPG11-202ENST00000427534 FAM19A1Q7Z5A9 133 aa10.01□□□□□ -0.81
SPG11-202ENST00000427534 CFC1BP0CG36 223 aa10□□□□□ -0.81
SPG11-202ENST00000427534 CFC1P0CG37 223 aa10□□□□□ -0.81
SPG11-202ENST00000427534 NDUFA11Q86Y39 141 aa10□□□□□ -0.81
SPG11-202ENST00000427534 MIR7-3HGQ8N6C7 128 aa10□□□□□ -0.81
SPG11-202ENST00000427534 MUC6Q6W4X9 2439 aa10□□□□□ -0.81
SPG11-202ENST00000427534 IGKV4-1P06312 121 aa10□□□□□ -0.81
SPG11-202ENST00000427534 SH2D6Q7Z4S9 175 aa10□□□□□ -0.81
SPG11-202ENST00000427534 FRMD6-AS1P0C7T7 363 aa10□□□□□ -0.81
SPG11-202ENST00000427534 Q6ZUT4 128 aa10□□□□□ -0.81
SPG11-202ENST00000427534 PLXNB3Q9ULL4 1909 aa10□□□□□ -0.81
SPG11-202ENST00000427534 NDUFB1O75438 58 aa10□□□□□ -0.81
SPG11-202ENST00000427534 HILS1P60008 231 aa10□□□□□ -0.81
SPG11-202ENST00000427534 IGLV1-47P01700 117 aa9.99□□□□□ -0.81
SPG11-202ENST00000427534 OXLD1Q5BKU9 147 aa9.99□□□□□ -0.81
SPG11-202ENST00000427534 IFITM1P13164 125 aa9.99□□□□□ -0.81
SPG11-202ENST00000427534 A4D1N5 150 aa9.99□□□□□ -0.81
SPG11-202ENST00000427534 SCXQ7RTU7 201 aa9.99□□□□□ -0.81
SPG11-202ENST00000427534 B9D2Q9BPU9 175 aa9.99□□□□□ -0.81
SPG11-202ENST00000427534 SPANXA1Q9NS26 97 aa9.99□□□□□ -0.81
SPG11-202ENST00000427534 NREPQ16612 68 aa9.99□□□□□ -0.81
SPG11-202ENST00000427534 WI2-2373I1.2A0A1W2PRP0 233 aa9.98□□□□□ -0.81
SPG11-202ENST00000427534 NUPR1O60356 82 aa9.98□□□□□ -0.81
SPG11-202ENST00000427534 GDF5OSQ5U4N7 250 aa9.98□□□□□ -0.81
SPG11-202ENST00000427534 CCDC140Q96MF4 163 aa9.98□□□□□ -0.81
SPG11-202ENST00000427534 PPDPFLQ8WWR9 84 aa9.98□□□□□ -0.81
SPG11-202ENST00000427534 SPINK6Q6UWN8 80 aa9.98□□□□□ -0.81
SPG11-202ENST00000427534 FAM167A-AS1Q96KT0 104 aa9.98□□□□□ -0.81
SPG11-202ENST00000427534 ACYP1P07311 99 aa9.98□□□□□ -0.81
SPG11-202ENST00000427534 TMEM263Q8WUH6 116 aaKnown RBP9.98□□□□□ -0.81
SPG11-202ENST00000427534 CREBBPQ92793 2442 aa9.98□□□□□ -0.81
SPG11-202ENST00000427534 PRSS47A8MTI9 375 aa9.98□□□□□ -0.81
SPG11-202ENST00000427534 FAM208BQ5VWN6 2430 aa9.98□□□□□ -0.81
SPG11-202ENST00000427534 C20orf173Q96LM9 149 aa9.98□□□□□ -0.81
SPG11-202ENST00000427534 K7EP34 96 aa9.97□□□□□ -0.81
SPG11-202ENST00000427534 REG3AQ06141 175 aa9.97□□□□□ -0.81
SPG11-202ENST00000427534 Q6YL49 198 aa9.97□□□□□ -0.81
SPG11-202ENST00000427534 SIVA1O15304 175 aa9.97□□□□□ -0.81
SPG11-202ENST00000427534 HERV-K104P63124 156 aa9.97□□□□□ -0.81
SPG11-202ENST00000427534 OTOGLQ3ZCN5 2332 aa9.97□□□□□ -0.81
SPG11-202ENST00000427534 NFE4Q86UQ8 179 aa9.96□□□□□ -0.81
SPG11-202ENST00000427534 PRO0255Q9UI72 69 aa9.96□□□□□ -0.81
SPG11-202ENST00000427534 SLPIP03973 132 aa9.96□□□□□ -0.82
SPG11-202ENST00000427534 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.82
SPG11-202ENST00000427534 K7EP13 123 aa9.96□□□□□ -0.82
SPG11-202ENST00000427534 Q6ZS46 218 aa9.96□□□□□ -0.82
SPG11-202ENST00000427534 LMO4P61968 165 aa9.95□□□□□ -0.82
SPG11-202ENST00000427534 Q6ZSV7 163 aa9.95□□□□□ -0.82
SPG11-202ENST00000427534 OBSL1O75147 1896 aa9.95□□□□□ -0.82
SPG11-202ENST00000427534 IGKV2-28A0A075B6P5 120 aa9.95□□□□□ -0.82
SPG11-202ENST00000427534 IGKV2D-28P01615 120 aa9.95□□□□□ -0.82
SPG11-202ENST00000427534 NANOS2P60321 138 aaKnown RBP9.95□□□□□ -0.82
SPG11-202ENST00000427534 DIRC1Q969H9 104 aa9.95□□□□□ -0.82
SPG11-202ENST00000427534 TDRG1Q3Y452 100 aa9.95□□□□□ -0.82
SPG11-202ENST00000427534 COA6Q5JTJ3 125 aaKnown RBP9.95□□□□□ -0.82
SPG11-202ENST00000427534 LOC100131303A0A0U1RQF7 123 aa9.94□□□□□ -0.82
SPG11-202ENST00000427534 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.94□□□□□ -0.82
SPG11-202ENST00000427534 TECTAO75443 2155 aa9.94□□□□□ -0.82
SPG11-202ENST00000427534 ANKRD39Q53RE8 183 aa9.94□□□□□ -0.82
SPG11-202ENST00000427534 LOXL1Q08397 574 aaPredicted RBP9.94□□□□□ -0.82
SPG11-202ENST00000427534 FBXL19-AS1Q494R0 122 aa9.94□□□□□ -0.82
SPG11-202ENST00000427534 A0A0J9YX75 114 aa9.94□□□□□ -0.82
SPG11-202ENST00000427534 TRBV6-1A0A0K0K1D8 114 aa9.93□□□□□ -0.82
SPG11-202ENST00000427534 F8W1H4 67 aa9.93□□□□□ -0.82
SPG11-202ENST00000427534 C1orf229Q6ZS94 237 aaPredicted RBP9.93□□□□□ -0.82
SPG11-202ENST00000427534 ZNF80P51504 273 aaPredicted RBP9.93□□□□□ -0.82
SPG11-202ENST00000427534 CDSNQ15517 529 aa9.93□□□□□ -0.82
SPG11-202ENST00000427534 C9orf85Q96MD7 179 aa9.93□□□□□ -0.82
SPG11-202ENST00000427534 PLA2G2AP14555 144 aa9.93□□□□□ -0.82
SPG11-202ENST00000427534 UBE2D1P51668 147 aa9.93□□□□□ -0.82
SPG11-202ENST00000427534 C11orf1Q9H5F2 150 aa9.93□□□□□ -0.82
SPG11-202ENST00000427534 A0A1B0GX51 115 aa9.92□□□□□ -0.82
SPG11-202ENST00000427534 RPL37AP8A6NKH3 93 aa9.92□□□□□ -0.82
SPG11-202ENST00000427534 RNF152Q8N8N0 203 aa9.92□□□□□ -0.82
SPG11-202ENST00000427534 BBC3Q96PG8 261 aaPredicted RBP9.92□□□□□ -0.82
SPG11-202ENST00000427534 IGHV4-30-4P0DP06 118 aa9.92□□□□□ -0.82
SPG11-202ENST00000427534 CHCHD10Q8WYQ3 142 aaPredicted RBP9.92□□□□□ -0.82
SPG11-202ENST00000427534 KRTAP10-9P60411 292 aa9.92□□□□□ -0.82
SPG11-202ENST00000427534 LINC00467Q9BRT7 94 aa9.92□□□□□ -0.82
SPG11-202ENST00000427534 Q8N976 141 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms