RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 MLST8Q9BVC4 326 aa6.52□□□□□ -1.37
GACAT3-201ENST00000426539 LRP1Q07954 4544 aaKnown RBP6.51□□□□□ -1.37
GACAT3-201ENST00000426539 MUC21A0A0G2JKD1 596 aa6.51□□□□□ -1.37
GACAT3-201ENST00000426539 MUC21A0A140T8X8 626 aa6.51□□□□□ -1.37
GACAT3-201ENST00000426539 TMEM262E9PQX1 116 aa6.51□□□□□ -1.37
GACAT3-201ENST00000426539 SNAI2O43623 268 aa6.51□□□□□ -1.37
GACAT3-201ENST00000426539 CXCL1P09341 107 aa6.51□□□□□ -1.37
GACAT3-201ENST00000426539 Q0VG73 95 aa6.51□□□□□ -1.37
GACAT3-201ENST00000426539 NTM-AS1Q6ZSK4 140 aa6.51□□□□□ -1.37
GACAT3-201ENST00000426539 C15orf54Q8N8G6 183 aa6.51□□□□□ -1.37
GACAT3-201ENST00000426539 STOML3Q8TAV4 291 aa6.51□□□□□ -1.37
GACAT3-201ENST00000426539 MBD3L1Q8WWY6 194 aa6.51□□□□□ -1.37
GACAT3-201ENST00000426539 A0A1B0GV50 99 aa6.5□□□□□ -1.37
GACAT3-201ENST00000426539 ZNF56Q15929 161 aa6.5□□□□□ -1.37
GACAT3-201ENST00000426539 KRTAP26-1Q6PEX3 210 aa6.5□□□□□ -1.37
GACAT3-201ENST00000426539 C1orf43Q9BWL3 253 aa6.5□□□□□ -1.37
GACAT3-201ENST00000426539 KIF25-AS1Q9Y6Z4 181 aa6.5□□□□□ -1.37
GACAT3-201ENST00000426539 USP17L23D6RBM5 183 aa6.49□□□□□ -1.37
GACAT3-201ENST00000426539 IGLV2-8P01709 118 aa6.49□□□□□ -1.37
GACAT3-201ENST00000426539 ANGP03950 147 aaKnown RBP6.49□□□□□ -1.37
GACAT3-201ENST00000426539 OR5AL1P0C617 328 aa6.49□□□□□ -1.37
GACAT3-201ENST00000426539 KCNIP4Q6PIL6 250 aa6.49□□□□□ -1.37
GACAT3-201ENST00000426539 BAGE2Q86Y30 109 aa6.49□□□□□ -1.37
GACAT3-201ENST00000426539 KCNRGQ8N5I3 272 aa6.49□□□□□ -1.37
GACAT3-201ENST00000426539 FAM213BQ8TBF2 198 aa6.49□□□□□ -1.37
GACAT3-201ENST00000426539 SFT2D1Q8WV19 159 aa6.49□□□□□ -1.37
GACAT3-201ENST00000426539 ZNF471Q9BX82 626 aaPredicted RBP6.49□□□□□ -1.37
GACAT3-201ENST00000426539 HMCN2Q8NDA2 5059 aa6.49□□□□□ -1.37
GACAT3-201ENST00000426539 CRPP02741 224 aa6.48□□□□□ -1.37
GACAT3-201ENST00000426539 S100A9P06702 114 aaKnown RBP6.48□□□□□ -1.37
GACAT3-201ENST00000426539 PRSS1P07477 247 aa6.48□□□□□ -1.37
GACAT3-201ENST00000426539 HNRNPA3P51991 378 aaKnown RBP6.48□□□□□ -1.37
GACAT3-201ENST00000426539 SSTP61278 116 aa6.48□□□□□ -1.37
GACAT3-201ENST00000426539 C14orf177Q52M58 125 aa6.48□□□□□ -1.37
GACAT3-201ENST00000426539 CHCHD5Q9BSY4 110 aa6.48□□□□□ -1.37
GACAT3-201ENST00000426539 PRR34Q9NV39 138 aa6.48□□□□□ -1.37
GACAT3-201ENST00000426539 VAX2Q9UIW0 290 aa6.48□□□□□ -1.37
GACAT3-201ENST00000426539 FAT3Q8TDW7 4589 aa6.47□□□□□ -1.37
GACAT3-201ENST00000426539 F5H697 171 aa6.47□□□□□ -1.37
GACAT3-201ENST00000426539 PANO1I0J062 215 aa6.47□□□□□ -1.37
GACAT3-201ENST00000426539 HLA-DQA1P01909 254 aa6.47□□□□□ -1.37
GACAT3-201ENST00000426539 RBX1P62877 108 aa6.47□□□□□ -1.37
GACAT3-201ENST00000426539 ZNF345Q14585 488 aa6.47□□□□□ -1.37
GACAT3-201ENST00000426539 SPANXN1Q5VSR9 72 aa6.47□□□□□ -1.37
GACAT3-201ENST00000426539 CLPSL2Q6UWE3 100 aa6.47□□□□□ -1.37
GACAT3-201ENST00000426539 UMAD1C9J7I0 102 aa6.46□□□□□ -1.38
GACAT3-201ENST00000426539 OXTP01178 125 aa6.46□□□□□ -1.38
GACAT3-201ENST00000426539 GZMBP10144 247 aa6.46□□□□□ -1.38
GACAT3-201ENST00000426539 CCL20P78556 96 aa6.46□□□□□ -1.38
GACAT3-201ENST00000426539 GAGE6Q13070 117 aa6.46□□□□□ -1.38
GACAT3-201ENST00000426539 MIAQ16674 131 aa6.46□□□□□ -1.38
GACAT3-201ENST00000426539 TMUB2Q71RG4 321 aa6.46□□□□□ -1.38
GACAT3-201ENST00000426539 LINC00269Q8N2A0 174 aa6.46□□□□□ -1.38
GACAT3-201ENST00000426539 DAZAP1Q96EP5 407 aaKnown RBP6.46□□□□□ -1.38
GACAT3-201ENST00000426539 DERL1Q9BUN8 251 aa6.46□□□□□ -1.38
GACAT3-201ENST00000426539 M0QY20 66 aa6.45□□□□□ -1.38
GACAT3-201ENST00000426539 IGLC6P0CF74 106 aa6.45□□□□□ -1.38
GACAT3-201ENST00000426539 RPL35P42766 123 aaKnown RBP6.45□□□□□ -1.38
GACAT3-201ENST00000426539 RPL37AP61513 92 aaKnown RBP6.45□□□□□ -1.38
GACAT3-201ENST00000426539 PKIAP61925 76 aa6.45□□□□□ -1.38
GACAT3-201ENST00000426539 IQCJQ1A5X6 159 aa6.45□□□□□ -1.38
GACAT3-201ENST00000426539 DGAT2L7PQ6IED9 249 aa6.45□□□□□ -1.38
GACAT3-201ENST00000426539 SDIM1Q6ZPB5 146 aa6.45□□□□□ -1.38
GACAT3-201ENST00000426539 C9orf163Q8N9P6 203 aa6.45□□□□□ -1.38
GACAT3-201ENST00000426539 C11orf52Q96A22 123 aa6.45□□□□□ -1.38
GACAT3-201ENST00000426539 HMSDA8MTL9 139 aa6.44□□□□□ -1.38
GACAT3-201ENST00000426539 BCL2L11O43521 198 aa6.44□□□□□ -1.38
GACAT3-201ENST00000426539 TMEM97Q5BJF2 176 aa6.44□□□□□ -1.38
GACAT3-201ENST00000426539 SERTAD4-AS1Q5TG53 156 aa6.44□□□□□ -1.38
GACAT3-201ENST00000426539 SUMO4Q6EEV6 95 aa6.44□□□□□ -1.38
GACAT3-201ENST00000426539 C20orf203Q8NBC4 194 aa6.44□□□□□ -1.38
GACAT3-201ENST00000426539 AP1S3Q96PC3 154 aa6.44□□□□□ -1.38
GACAT3-201ENST00000426539 GFRA4Q9GZZ7 299 aa6.44□□□□□ -1.38
GACAT3-201ENST00000426539 TRBV25-1A0A075B6N4 114 aa6.43□□□□□ -1.38
GACAT3-201ENST00000426539 IGHV1-24A0A0C4DH33 117 aa6.43□□□□□ -1.38
GACAT3-201ENST00000426539 A0A0D9SG52 128 aa6.43□□□□□ -1.38
GACAT3-201ENST00000426539 C19orf71A6NCJ1 209 aa6.43□□□□□ -1.38
GACAT3-201ENST00000426539 MGPP08493 103 aa6.43□□□□□ -1.38
GACAT3-201ENST00000426539 SMIM17P0DL12 118 aa6.43□□□□□ -1.38
GACAT3-201ENST00000426539 CENPWQ5EE01 88 aa6.43□□□□□ -1.38
GACAT3-201ENST00000426539 AKAP14Q86UN6 197 aa6.43□□□□□ -1.38
GACAT3-201ENST00000426539 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.43□□□□□ -1.38
GACAT3-201ENST00000426539 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
GACAT3-201ENST00000426539 IGLV4-60A0A075B6I1 120 aa6.42□□□□□ -1.38
GACAT3-201ENST00000426539 IGLV10-54A0A075B6I4 117 aa6.42□□□□□ -1.38
GACAT3-201ENST00000426539 KANTRA0A1W2PQU2 76 aa6.42□□□□□ -1.38
GACAT3-201ENST00000426539 RAB19A4D1S5 217 aa6.42□□□□□ -1.38
GACAT3-201ENST00000426539 SLPIP03973 132 aa6.42□□□□□ -1.38
GACAT3-201ENST00000426539 NKX2-5P52952 324 aaPredicted RBP6.42□□□□□ -1.38
GACAT3-201ENST00000426539 REG3AQ06141 175 aa6.42□□□□□ -1.38
GACAT3-201ENST00000426539 FER1L6-AS1Q8NA97 138 aa6.42□□□□□ -1.38
GACAT3-201ENST00000426539 OR2D3Q8NGH3 330 aa6.42□□□□□ -1.38
GACAT3-201ENST00000426539 TPPP3Q9BW30 176 aa6.42□□□□□ -1.38
GACAT3-201ENST00000426539 GNG13Q9P2W3 67 aa6.42□□□□□ -1.38
GACAT3-201ENST00000426539 TRBV20OR9-2A0A075B6H5 130 aa6.41□□□□□ -1.38
GACAT3-201ENST00000426539 TRAV1-1A0A0B4J248 108 aa6.41□□□□□ -1.38
GACAT3-201ENST00000426539 CNBPP62633 177 aaKnown RBP6.41□□□□□ -1.38
GACAT3-201ENST00000426539 CIRBPQ14011 172 aaKnown RBP6.41□□□□□ -1.38
GACAT3-201ENST00000426539 MANBALQ9NQG1 85 aa6.41□□□□□ -1.38
GACAT3-201ENST00000426539 A0A1B0GUV1 79 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms