RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 HIGD1BQ9P298 99 aa2.02□□□□□ -2.09
LINC00407-201ENST00000426509 HLA-DRB4X5D2U9 266 aa2.02□□□□□ -2.09
LINC00407-201ENST00000426509 JMJD1CQ15652 2540 aa2.02□□□□□ -2.09
LINC00407-201ENST00000426509 HRNRQ86YZ3 2850 aaPredicted RBP2.02□□□□□ -2.09
LINC00407-201ENST00000426509 TRRAPQ9Y4A5 3859 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 HYDINQ4G0P3 5121 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 WNK2Q9Y3S1 2297 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 TRAV12-1A0A0B4J245 112 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 IGHV3-16A0A0C4DH30 117 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 A0A0J9YX75 114 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 TRBV6-5A0A0K0K1A5 114 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 C7orf71A4D174 169 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 RBMY1BA6NDE4 496 aaKnown RBP2.01□□□□□ -2.09
LINC00407-201ENST00000426509 RBMY1EA6NEQ0 496 aaKnown RBP2.01□□□□□ -2.09
LINC00407-201ENST00000426509 F8VRH5 84 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 H3BRM9 83 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 K7EP13 123 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 LGALS9O00182 355 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 DPM2O94777 84 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 TGFAP01135 160 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 TSHBP01222 138 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 IGKCP01834 107 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 PRSS1P07477 247 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 MGPP08493 103 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 RBMY1DP0C7P1 496 aaKnown RBP2.01□□□□□ -2.09
LINC00407-201ENST00000426509 ZNF688P0C7X2 276 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 S100A4P26447 101 aaKnown RBP2.01□□□□□ -2.09
LINC00407-201ENST00000426509 ID1P41134 155 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 NMUP48645 174 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 POLR2KP53803 58 aaKnown RBP2.01□□□□□ -2.09
LINC00407-201ENST00000426509 FXYD2P54710 66 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 VAMP3Q15836 100 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 ORMDL2Q53FV1 153 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 PSMG4Q5JS54 123 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 ZC2HC1BQ5TFG8 222 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 SAMD13Q5VXD3 122 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 AMMECR1LQ6DCA0 310 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 SUMO4Q6EEV6 95 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 UFSP1Q6NVU6 142 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 MORN3Q6PF18 240 aaPredicted RBP2.01□□□□□ -2.09
LINC00407-201ENST00000426509 AMTNQ6UX39 209 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 NEGR1Q7Z3B1 354 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 GTSCR1Q86UQ5 136 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 NEXN-AS1Q8NBZ9 246 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 RNASE8Q8TDE3 154 aaKnown RBP2.01□□□□□ -2.09
LINC00407-201ENST00000426509 PHLDA1Q8WV24 401 aaPredicted RBP2.01□□□□□ -2.09
LINC00407-201ENST00000426509 BAALCQ8WXS3 180 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 AP1S3Q96PC3 154 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 CHAC1Q9BUX1 264 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 JPT2Q9H910 190 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 YAE1D1Q9NRH1 226 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 BEX4Q9NWD9 120 aaPredicted RBP2.01□□□□□ -2.09
LINC00407-201ENST00000426509 MRPL35Q9NZE8 188 aaKnown RBP2.01□□□□□ -2.09
LINC00407-201ENST00000426509 VPREB3Q9UKI3 123 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 PHLDA3Q9Y5J5 127 aa2.01□□□□□ -2.09
LINC00407-201ENST00000426509 CR1P17927 2039 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 NSD1Q96L73 2696 aaPredicted RBP2□□□□□ -2.09
LINC00407-201ENST00000426509 IGLV4-69A0A075B6H9 119 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 TRBV7-3A0A075B6L6 115 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 TRBV25-1A0A075B6N4 114 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 TRAV12-2A0A075B6T6 113 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 IGHV1OR15-1A0A075B7D0 117 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 TRAV12-3A0A0B4J271 114 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 A6NDN8 102 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 IGIPA6NJ69 53 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 LINC01619G3V211 115 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 H7C1H1 209 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 K7EMI3 77 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 K7EP34 96 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 DUSP14O95147 198 aaKnown RBP2□□□□□ -2.09
LINC00407-201ENST00000426509 PPP1R17O96001 155 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 CRYGDP07320 174 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 CD7P09564 240 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 RBMY1A1P0DJD3 496 aaKnown RBP2□□□□□ -2.09
LINC00407-201ENST00000426509 RBMY1CP0DJD4 496 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 HOXD3P31249 432 aaPredicted RBP2□□□□□ -2.09
LINC00407-201ENST00000426509 SYNJ2BPP57105 145 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 RBX1P62877 108 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 FHL3Q13643 280 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 RBMY1FQ15415 496 aaKnown RBP2□□□□□ -2.09
LINC00407-201ENST00000426509 SPINK13Q1W4C9 94 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 TCTEX1D4Q5JR98 221 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 C2orf66Q6UXQ4 117 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 ZFP2Q6ZN57 461 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 FOXI2Q6ZQN5 318 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 C18orf65Q6ZTR6 163 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 LRRC75A-AS1Q8N1F1 130 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 Q8N2B8 174 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2□□□□□ -2.09
LINC00407-201ENST00000426509 C11orf44Q8N8P7 122 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 UBE2E2Q96LR5 201 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 DUX5Q96PT3 197 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 SCGB3A1Q96QR1 104 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 NAA38Q9BRA0 125 aaKnown RBP2□□□□□ -2.09
LINC00407-201ENST00000426509 CSTL1Q9H114 145 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 TMEM160Q9NX00 188 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 MDFICQ9P1T7 246 aa2□□□□□ -2.09
LINC00407-201ENST00000426509 ZNF256Q9Y2P7 627 aaPredicted RBP2□□□□□ -2.09
LINC00407-201ENST00000426509 CHTOPQ9Y3Y2 248 aaKnown RBP2□□□□□ -2.09
LINC00407-201ENST00000426509 MUC4Q99102 2169 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms