RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 CITED1Q99966 193 aa12.83□□□□□ -0.36
RARA-206ENST00000425707 CSMD1Q96PZ7 3565 aa12.82□□□□□ -0.36
RARA-206ENST00000425707 MUSTN1Q8IVN3 82 aa12.82□□□□□ -0.36
RARA-206ENST00000425707 IGLV4-3A0A075B6K6 122 aa12.82□□□□□ -0.36
RARA-206ENST00000425707 IGHV1OR15-1A0A075B7D0 117 aa12.82□□□□□ -0.36
RARA-206ENST00000425707 RPL13AP40429 203 aaKnown RBP12.82□□□□□ -0.36
RARA-206ENST00000425707 IGKV3-7A0A075B6H7 116 aa12.81□□□□□ -0.36
RARA-206ENST00000425707 C9JAW5 83 aa12.81□□□□□ -0.36
RARA-206ENST00000425707 BRD3OSQ6XYD6 125 aa12.81□□□□□ -0.36
RARA-206ENST00000425707 RNF183Q96D59 192 aa12.81□□□□□ -0.36
RARA-206ENST00000425707 SRD5A1P18405 259 aa12.81□□□□□ -0.36
RARA-206ENST00000425707 FAM74A4Q5TZK3 123 aa12.81□□□□□ -0.36
RARA-206ENST00000425707 ZFAND6Q6FIF0 208 aa12.81□□□□□ -0.36
RARA-206ENST00000425707 SPTAN1Q13813 2472 aaKnown RBP12.81□□□□□ -0.36
RARA-206ENST00000425707 IGSF10Q6WRI0 2623 aa12.8□□□□□ -0.36
RARA-206ENST00000425707 TMEM89A2RUT3 159 aa12.8□□□□□ -0.36
RARA-206ENST00000425707 H3BUX3 64 aa12.8□□□□□ -0.36
RARA-206ENST00000425707 SNRPD3P62318 126 aaKnown RBP12.8□□□□□ -0.36
RARA-206ENST00000425707 Q8N1Y9 231 aa12.8□□□□□ -0.36
RARA-206ENST00000425707 IGHV3OR16-10A0A075B7F0 116 aa12.8□□□□□ -0.36
RARA-206ENST00000425707 TRAV2A0A0B4J234 112 aa12.8□□□□□ -0.36
RARA-206ENST00000425707 A0A0J9YXY3 114 aa12.8□□□□□ -0.36
RARA-206ENST00000425707 IGHV4-39P01824 125 aa12.8□□□□□ -0.36
RARA-206ENST00000425707 MRPS36P82909 103 aaKnown RBP12.8□□□□□ -0.36
RARA-206ENST00000425707 SVIPQ8NHG7 77 aa12.79□□□□□ -0.36
RARA-206ENST00000425707 RAX2Q96IS3 184 aa12.79□□□□□ -0.36
RARA-206ENST00000425707 CFAP46Q8IYW2 2715 aa12.79□□□□□ -0.36
RARA-206ENST00000425707 TRGV11A0A075B6L2 103 aa12.79□□□□□ -0.36
RARA-206ENST00000425707 LINC01620Q4KN68 170 aa12.79□□□□□ -0.36
RARA-206ENST00000425707 SPANXDQ9BXN6 97 aa12.79□□□□□ -0.36
RARA-206ENST00000425707 SPANXCQ9NY87 97 aa12.79□□□□□ -0.36
RARA-206ENST00000425707 TEX29Q8N6K0 151 aa12.78□□□□□ -0.36
RARA-206ENST00000425707 K7EQG2 157 aa12.78□□□□□ -0.36
RARA-206ENST00000425707 LY6EQ16553 131 aa12.78□□□□□ -0.36
RARA-206ENST00000425707 CLUHP3Q96NS8 147 aa12.78□□□□□ -0.36
RARA-206ENST00000425707 PIMREGQ9BSJ6 248 aa12.78□□□□□ -0.36
RARA-206ENST00000425707 TRBV10-2A0A0K0K1G8 114 aa12.78□□□□□ -0.36
RARA-206ENST00000425707 Q6Q795 121 aa12.78□□□□□ -0.36
RARA-206ENST00000425707 LITAFQ99732 161 aa12.78□□□□□ -0.36
RARA-206ENST00000425707 OPRPNQ99935 248 aaPredicted RBP12.78□□□□□ -0.36
RARA-206ENST00000425707 A0A0J9YXV3 536 aa12.77□□□□□ -0.36
RARA-206ENST00000425707 BLCAPP62952 87 aa12.77□□□□□ -0.36
RARA-206ENST00000425707 IGHV4-38-2P0DP08 117 aa12.77□□□□□ -0.37
RARA-206ENST00000425707 IGHV3-30-3P0DP02 117 aa12.76□□□□□ -0.37
RARA-206ENST00000425707 PSMB8P28062 276 aa12.76□□□□□ -0.37
RARA-206ENST00000425707 PIK3CD-AS1Q5SR53 167 aa12.76□□□□□ -0.37
RARA-206ENST00000425707 TIMM21Q9BVV7 248 aa12.76□□□□□ -0.37
RARA-206ENST00000425707 Q5PR19 223 aa12.76□□□□□ -0.37
RARA-206ENST00000425707 ABCA2Q9BZC7 2435 aa12.76□□□□□ -0.37
RARA-206ENST00000425707 MED13LQ71F56 2210 aa12.75□□□□□ -0.37
RARA-206ENST00000425707 ANAPC13Q9BS18 74 aa12.75□□□□□ -0.37
RARA-206ENST00000425707 TGFAP01135 160 aa12.75□□□□□ -0.37
RARA-206ENST00000425707 DEFB104AQ8WTQ1 72 aa12.75□□□□□ -0.37
RARA-206ENST00000425707 IGHV1-58A0A0C4DH39 117 aa12.74□□□□□ -0.37
RARA-206ENST00000425707 IGHV4-61A0A0C4DH41 118 aa12.74□□□□□ -0.37
RARA-206ENST00000425707 EDN2P20800 178 aa12.74□□□□□ -0.37
RARA-206ENST00000425707 C10orf105Q8TEF2 133 aa12.74□□□□□ -0.37
RARA-206ENST00000425707 SPTBN1Q01082 2364 aaKnown RBP12.74□□□□□ -0.37
RARA-206ENST00000425707 TIMM17BO60830 172 aa12.73□□□□□ -0.37
RARA-206ENST00000425707 MRPL23Q16540 153 aaKnown RBP12.73□□□□□ -0.37
RARA-206ENST00000425707 Q1RN00 199 aa12.73□□□□□ -0.37
RARA-206ENST00000425707 FAM104AQ969W3 186 aa12.73□□□□□ -0.37
RARA-206ENST00000425707 PRORYQ9H606 182 aa12.73□□□□□ -0.37
RARA-206ENST00000425707 TINCRA0A1B0GVN0 87 aa12.73□□□□□ -0.37
RARA-206ENST00000425707 H3BT86 120 aa12.73□□□□□ -0.37
RARA-206ENST00000425707 NTN5Q8WTR8 489 aaPredicted RBP12.73□□□□□ -0.37
RARA-206ENST00000425707 TRAV12-2A0A075B6T6 113 aa12.72□□□□□ -0.37
RARA-206ENST00000425707 TRIAP1O43715 76 aa12.72□□□□□ -0.37
RARA-206ENST00000425707 SNCGO76070 127 aa12.72□□□□□ -0.37
RARA-206ENST00000425707 CD28P10747 220 aa12.72□□□□□ -0.37
RARA-206ENST00000425707 WFDC12Q8WWY7 111 aa12.72□□□□□ -0.37
RARA-206ENST00000425707 SPANXA1Q9NS26 97 aa12.72□□□□□ -0.37
RARA-206ENST00000425707 MIAQ16674 131 aa12.72□□□□□ -0.37
RARA-206ENST00000425707 YAE1D1Q9NRH1 226 aa12.72□□□□□ -0.37
RARA-206ENST00000425707 COX6CP09669 75 aa12.71□□□□□ -0.38
RARA-206ENST00000425707 GAGE2BQ13066 116 aa12.71□□□□□ -0.38
RARA-206ENST00000425707 GAGE2EQ4V326 116 aa12.71□□□□□ -0.38
RARA-206ENST00000425707 GAGE2DQ9UEU5 116 aa12.71□□□□□ -0.38
RARA-206ENST00000425707 ELANEP08246 267 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 IFITM1P13164 125 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 SPINK13Q1W4C9 94 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 ICOSQ9Y6W8 199 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 A8MTW9 85 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 GAGE5Q13069 117 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 GAGE6Q13070 117 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 VSIG2Q96IQ7 327 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 IGHV3-64A0A075B6Q5 118 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 H3BMM0 161 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 H7C2G1 150 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 UBE2WQ96B02 151 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 SPXQ9BT56 116 aa12.7□□□□□ -0.38
RARA-206ENST00000425707 TRAV8-4A0A0B4J246 113 aa12.69□□□□□ -0.38
RARA-206ENST00000425707 FAM240AA0A1B0GVK7 77 aa12.69□□□□□ -0.38
RARA-206ENST00000425707 DEFB121Q5J5C9 76 aa12.69□□□□□ -0.38
RARA-206ENST00000425707 NDUFA12Q9UI09 145 aa12.69□□□□□ -0.38
RARA-206ENST00000425707 MSMBP08118 114 aa12.68□□□□□ -0.38
RARA-206ENST00000425707 ZNF462Q96JM2 2506 aa12.67□□□□□ -0.38
RARA-206ENST00000425707 MYO18BQ8IUG5 2567 aa12.67□□□□□ -0.38
RARA-206ENST00000425707 TNFRSF18Q9Y5U5 241 aa12.67□□□□□ -0.38
RARA-206ENST00000425707 PRB1P04280 392 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms