RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 IGLV10-54A0A075B6I4 117 aa10.47□□□□□ -0.73
CHCHD3-202ENST00000423635 TRBV6-1A0A0K0K1D8 114 aa10.47□□□□□ -0.73
CHCHD3-202ENST00000423635 PEX7O00628 323 aa10.47□□□□□ -0.73
CHCHD3-202ENST00000423635 IFNA7P01567 189 aa10.47□□□□□ -0.73
CHCHD3-202ENST00000423635 GZMBP10144 247 aa10.47□□□□□ -0.73
CHCHD3-202ENST00000423635 ATP6V0CP27449 155 aa10.47□□□□□ -0.73
CHCHD3-202ENST00000423635 ZNF56Q15929 161 aa10.47□□□□□ -0.73
CHCHD3-202ENST00000423635 GTSF1Q8WW33 167 aa10.47□□□□□ -0.73
CHCHD3-202ENST00000423635 HIST1H2BAQ96A08 127 aa10.47□□□□□ -0.73
CHCHD3-202ENST00000423635 DERL1Q9BUN8 251 aa10.47□□□□□ -0.73
CHCHD3-202ENST00000423635 TRBV25-1A0A075B6N4 114 aa10.46□□□□□ -0.73
CHCHD3-202ENST00000423635 TMSB15BA0A087X1C1 80 aa10.46□□□□□ -0.73
CHCHD3-202ENST00000423635 IQCJQ1A5X6 159 aa10.46□□□□□ -0.73
CHCHD3-202ENST00000423635 REG3GQ6UW15 175 aa10.46□□□□□ -0.73
CHCHD3-202ENST00000423635 ACTR3CQ9C0K3 210 aaPredicted RBP10.46□□□□□ -0.73
CHCHD3-202ENST00000423635 TNFSF18Q9UNG2 199 aa10.46□□□□□ -0.73
CHCHD3-202ENST00000423635 COX6A2Q02221 97 aa10.45□□□□□ -0.74
CHCHD3-202ENST00000423635 C20orf203Q8NBC4 194 aa10.45□□□□□ -0.74
CHCHD3-202ENST00000423635 ENKURQ8TC29 256 aa10.45□□□□□ -0.74
CHCHD3-202ENST00000423635 NKX6-2Q9C056 277 aaPredicted RBP10.45□□□□□ -0.74
CHCHD3-202ENST00000423635 INMT-MINDY4F8WBC2 141 aa10.44□□□□□ -0.74
CHCHD3-202ENST00000423635 SRSF9Q13242 221 aaKnown RBP eCLIP10.44□□□□□ -0.74
CHCHD3-202ENST00000423635 A0A1B0GUV1 79 aa10.43□□□□□ -0.74
CHCHD3-202ENST00000423635 NDUFS6O75380 124 aaKnown RBP10.43□□□□□ -0.74
CHCHD3-202ENST00000423635 MAJINQ3KP22 176 aa10.43□□□□□ -0.74
CHCHD3-202ENST00000423635 IGHV1-24A0A0C4DH33 117 aa10.42□□□□□ -0.74
CHCHD3-202ENST00000423635 OR10AG1Q8NH19 301 aa10.42□□□□□ -0.74
CHCHD3-202ENST00000423635 PRSS3P2Q8NHM4 247 aa10.42□□□□□ -0.74
CHCHD3-202ENST00000423635 FMC1Q96HJ9 113 aa10.42□□□□□ -0.74
CHCHD3-202ENST00000423635 SSBP4Q9BWG4 385 aaPredicted RBP10.42□□□□□ -0.74
CHCHD3-202ENST00000423635 ZNF471Q9BX82 626 aaPredicted RBP10.42□□□□□ -0.74
CHCHD3-202ENST00000423635 MUC21A0A0G2JKD1 596 aa10.41□□□□□ -0.74
CHCHD3-202ENST00000423635 FAM74A7A6NL05 159 aa10.41□□□□□ -0.74
CHCHD3-202ENST00000423635 F5H697 171 aa10.41□□□□□ -0.74
CHCHD3-202ENST00000423635 RPS10P46783 165 aaKnown RBP10.41□□□□□ -0.74
CHCHD3-202ENST00000423635 UBE2G2P60604 165 aa10.41□□□□□ -0.74
CHCHD3-202ENST00000423635 STPG4Q8N801 248 aa10.41□□□□□ -0.74
CHCHD3-202ENST00000423635 MARVELD1Q9BSK0 173 aa10.41□□□□□ -0.74
CHCHD3-202ENST00000423635 IGLV4-60A0A075B6I1 120 aa10.4□□□□□ -0.74
CHCHD3-202ENST00000423635 A6NHS1 94 aa10.4□□□□□ -0.74
CHCHD3-202ENST00000423635 SNAI2O43623 268 aa10.4□□□□□ -0.74
CHCHD3-202ENST00000423635 SSNA1O43805 119 aa10.4□□□□□ -0.74
CHCHD3-202ENST00000423635 LTAP01374 205 aa10.4□□□□□ -0.74
CHCHD3-202ENST00000423635 CXCL1P09341 107 aa10.4□□□□□ -0.74
CHCHD3-202ENST00000423635 RAB5CP51148 216 aa10.4□□□□□ -0.74
CHCHD3-202ENST00000423635 ZNF726P1Q15940 193 aa10.4□□□□□ -0.74
CHCHD3-202ENST00000423635 C15orf56Q8N910 161 aa10.4□□□□□ -0.74
CHCHD3-202ENST00000423635 GFRA4Q9GZZ7 299 aa10.4□□□□□ -0.74
CHCHD3-202ENST00000423635 MUC2Q02817 5179 aa10.4□□□□□ -0.74
CHCHD3-202ENST00000423635 UBE2G1P62253 170 aa10.39□□□□□ -0.75
CHCHD3-202ENST00000423635 CFAP161Q6P656 301 aa10.39□□□□□ -0.75
CHCHD3-202ENST00000423635 LYPD6BQ8NI32 183 aa10.39□□□□□ -0.75
CHCHD3-202ENST00000423635 IGKV2-24A0A0C4DH68 120 aa10.38□□□□□ -0.75
CHCHD3-202ENST00000423635 LINC00299Q6ZSB3 139 aa10.38□□□□□ -0.75
CHCHD3-202ENST00000423635 AQP10Q96PS8 301 aa10.38□□□□□ -0.75
CHCHD3-202ENST00000423635 KRTAP9-2Q9BYQ4 174 aa10.38□□□□□ -0.75
CHCHD3-202ENST00000423635 CTXND1A0A1B0GTU2 59 aa10.37□□□□□ -0.75
CHCHD3-202ENST00000423635 OR5AL1P0C617 328 aa10.37□□□□□ -0.75
CHCHD3-202ENST00000423635 SPANXN1Q5VSR9 72 aa10.37□□□□□ -0.75
CHCHD3-202ENST00000423635 M0QY20 66 aa10.35□□□□□ -0.75
CHCHD3-202ENST00000423635 UPK1BO75841 260 aa10.35□□□□□ -0.75
CHCHD3-202ENST00000423635 Q6ZRP5 223 aa10.35□□□□□ -0.75
CHCHD3-202ENST00000423635 S100ZQ8WXG8 99 aa10.35□□□□□ -0.75
CHCHD3-202ENST00000423635 TCEAL7Q9BRU2 100 aa10.35□□□□□ -0.75
CHCHD3-202ENST00000423635 TMEM243Q9BU79 118 aa10.35□□□□□ -0.75
CHCHD3-202ENST00000423635 A0A096LNI7 61 aa10.34□□□□□ -0.75
CHCHD3-202ENST00000423635 MUC21A0A140T8X8 626 aa10.34□□□□□ -0.75
CHCHD3-202ENST00000423635 SMIM17P0DL12 118 aa10.34□□□□□ -0.75
CHCHD3-202ENST00000423635 FHITP49789 147 aa10.34□□□□□ -0.75
CHCHD3-202ENST00000423635 IFITM3Q01628 133 aa10.34□□□□□ -0.75
CHCHD3-202ENST00000423635 INO80EQ8NBZ0 244 aaPredicted RBP10.34□□□□□ -0.75
CHCHD3-202ENST00000423635 LINC00474Q9P2X8 69 aa10.34□□□□□ -0.75
CHCHD3-202ENST00000423635 GAGE12HA6NDE8 117 aa10.33□□□□□ -0.76
CHCHD3-202ENST00000423635 HIGD2BQ4VC39 106 aa10.33□□□□□ -0.76
CHCHD3-202ENST00000423635 MLST8Q9BVC4 326 aa10.33□□□□□ -0.76
CHCHD3-202ENST00000423635 NDUFA13Q9P0J0 144 aa10.33□□□□□ -0.76
CHCHD3-202ENST00000423635 GVQW2A0A096LPI5 108 aaPredicted RBP10.32□□□□□ -0.76
CHCHD3-202ENST00000423635 H7C1H1 209 aa10.32□□□□□ -0.76
CHCHD3-202ENST00000423635 SULT1A2P50226 295 aa10.32□□□□□ -0.76
CHCHD3-202ENST00000423635 PGLYRP4Q96LB8 373 aa10.32□□□□□ -0.76
CHCHD3-202ENST00000423635 AP1S3Q96PC3 154 aa10.32□□□□□ -0.76
CHCHD3-202ENST00000423635 AKR1C3P42330 323 aa10.31□□□□□ -0.76
CHCHD3-202ENST00000423635 SSTP61278 116 aa10.31□□□□□ -0.76
CHCHD3-202ENST00000423635 FAM231BA6NCW3 169 aa10.3□□□□□ -0.76
CHCHD3-202ENST00000423635 S100A9P06702 114 aaKnown RBP10.3□□□□□ -0.76
CHCHD3-202ENST00000423635 DEFA3P59666 94 aa10.3□□□□□ -0.76
CHCHD3-202ENST00000423635 RPL7L1Q6DKI1 246 aaKnown RBP10.3□□□□□ -0.76
CHCHD3-202ENST00000423635 SUMO4Q6EEV6 95 aa10.3□□□□□ -0.76
CHCHD3-202ENST00000423635 UBE2L6O14933 153 aa10.29□□□□□ -0.76
CHCHD3-202ENST00000423635 NKX2-5P52952 324 aaPredicted RBP10.29□□□□□ -0.76
CHCHD3-202ENST00000423635 CST9LP1Q5W188 147 aa10.29□□□□□ -0.76
CHCHD3-202ENST00000423635 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
CHCHD3-202ENST00000423635 FAT4Q6V0I7 4981 aa10.28□□□□□ -0.76
CHCHD3-202ENST00000423635 STOML3Q8TAV4 291 aa10.28□□□□□ -0.76
CHCHD3-202ENST00000423635 BORCS7-ASMTA0A0B4J1R7 106 aa10.27□□□□□ -0.77
CHCHD3-202ENST00000423635 MAP1LC3B2A6NCE7 125 aa10.27□□□□□ -0.77
CHCHD3-202ENST00000423635 MGPP08493 103 aa10.27□□□□□ -0.77
CHCHD3-202ENST00000423635 AKR1C8PQ5T2L2 129 aa10.27□□□□□ -0.77
CHCHD3-202ENST00000423635 RASL11AQ6T310 242 aa10.27□□□□□ -0.77
CHCHD3-202ENST00000423635 BAGE2Q86Y30 109 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms