RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 KNCNA6PVL3 124 aa13.78□□□□□ -0.2
RAF1-203ENST00000423275 RIPPLY3P57055 190 aa13.78□□□□□ -0.2
RAF1-203ENST00000423275 SCGB1D4Q6XE38 83 aa13.78□□□□□ -0.2
RAF1-203ENST00000423275 KRTAP1-3Q8IUG1 177 aa13.78□□□□□ -0.2
RAF1-203ENST00000423275 RBMY1A1P0DJD3 496 aaKnown RBP13.78□□□□□ -0.2
RAF1-203ENST00000423275 RBMY1CP0DJD4 496 aa13.78□□□□□ -0.2
RAF1-203ENST00000423275 RBMY1FQ15415 496 aaKnown RBP13.78□□□□□ -0.2
RAF1-203ENST00000423275 TMEM141Q96I45 108 aa13.78□□□□□ -0.2
RAF1-203ENST00000423275 TIMM17AQ99595 171 aa13.78□□□□□ -0.2
RAF1-203ENST00000423275 G3V4G9 280 aa13.77□□□□□ -0.21
RAF1-203ENST00000423275 ZNF876PQ49A33 203 aa13.77□□□□□ -0.21
RAF1-203ENST00000423275 FOXI2Q6ZQN5 318 aa13.76□□□□□ -0.21
RAF1-203ENST00000423275 ZNRF2Q8NHG8 242 aa13.76□□□□□ -0.21
RAF1-203ENST00000423275 OPRPNQ99935 248 aaPredicted RBP13.76□□□□□ -0.21
RAF1-203ENST00000423275 A0A1B0GWB2 263 aa13.76□□□□□ -0.21
RAF1-203ENST00000423275 LINC01549A6NIU2 74 aa13.75□□□□□ -0.21
RAF1-203ENST00000423275 HTN1P15515 57 aa13.75□□□□□ -0.21
RAF1-203ENST00000423275 Q8N2B8 174 aa13.75□□□□□ -0.21
RAF1-203ENST00000423275 TSPEAR-AS2P59090 65 aa13.75□□□□□ -0.21
RAF1-203ENST00000423275 RRN3P1Q2M238 152 aa13.75□□□□□ -0.21
RAF1-203ENST00000423275 H3BMG7 143 aa13.74□□□□□ -0.21
RAF1-203ENST00000423275 PRM2P04554 102 aa13.74□□□□□ -0.21
RAF1-203ENST00000423275 DEFB131AP59861 70 aa13.74□□□□□ -0.21
RAF1-203ENST00000423275 PAPPA-AS1Q5QFB9 102 aa13.74□□□□□ -0.21
RAF1-203ENST00000423275 TMEM170BQ5T4T1 132 aa13.74□□□□□ -0.21
RAF1-203ENST00000423275 SONP18583 2426 aaKnown RBP13.74□□□□□ -0.21
RAF1-203ENST00000423275 P0DMU3 169 aa13.74□□□□□ -0.21
RAF1-203ENST00000423275 FAM231AP0DMU4 169 aa13.74□□□□□ -0.21
RAF1-203ENST00000423275 FAM231CP0DMU5 169 aa13.74□□□□□ -0.21
RAF1-203ENST00000423275 TRPT1Q86TN4 253 aaKnown RBP13.74□□□□□ -0.21
RAF1-203ENST00000423275 HERVK_113P61574 105 aa13.73□□□□□ -0.21
RAF1-203ENST00000423275 RPL24P83731 157 aaKnown RBP13.73□□□□□ -0.21
RAF1-203ENST00000423275 LRRC75A-AS1Q8N1F1 130 aa13.73□□□□□ -0.21
RAF1-203ENST00000423275 SRSF9Q13242 221 aaKnown RBP eCLIP13.73□□□□□ -0.21
RAF1-203ENST00000423275 CUBNO60494 3623 aa13.73□□□□□ -0.21
RAF1-203ENST00000423275 AKAP9Q99996 3911 aa13.72□□□□□ -0.21
RAF1-203ENST00000423275 ITPR3Q14573 2671 aa13.72□□□□□ -0.21
RAF1-203ENST00000423275 TEX48A0A1B0GUV7 120 aa13.72□□□□□ -0.21
RAF1-203ENST00000423275 RBMY1BA6NDE4 496 aaKnown RBP13.72□□□□□ -0.21
RAF1-203ENST00000423275 RBMY1EA6NEQ0 496 aaKnown RBP13.72□□□□□ -0.21
RAF1-203ENST00000423275 RBMY1DP0C7P1 496 aaKnown RBP13.72□□□□□ -0.21
RAF1-203ENST00000423275 NSUN5P1Q3KNT7 163 aa13.72□□□□□ -0.21
RAF1-203ENST00000423275 KHDC1LQ5JSQ8 128 aa13.72□□□□□ -0.21
RAF1-203ENST00000423275 TMEM61Q8N0U2 210 aa13.72□□□□□ -0.21
RAF1-203ENST00000423275 TRGV11A0A075B6L2 103 aa13.71□□□□□ -0.21
RAF1-203ENST00000423275 IGHV3-73A0A0B4J1V6 119 aa13.71□□□□□ -0.21
RAF1-203ENST00000423275 WFDC2Q14508 124 aa13.71□□□□□ -0.21
RAF1-203ENST00000423275 MTURNQ8N3F0 131 aa13.71□□□□□ -0.21
RAF1-203ENST00000423275 A0A0J9YY99 117 aa13.71□□□□□ -0.22
RAF1-203ENST00000423275 DLX4Q92988 240 aaPredicted RBP13.71□□□□□ -0.22
RAF1-203ENST00000423275 PGPEP1Q9NXJ5 209 aa13.71□□□□□ -0.22
RAF1-203ENST00000423275 RHOHQ15669 191 aa13.7□□□□□ -0.22
RAF1-203ENST00000423275 NF1P21359 2839 aa13.7□□□□□ -0.22
RAF1-203ENST00000423275 H3BMM0 161 aa13.69□□□□□ -0.22
RAF1-203ENST00000423275 PROK1P58294 105 aa13.69□□□□□ -0.22
RAF1-203ENST00000423275 C20orf203Q8NBC4 194 aa13.69□□□□□ -0.22
RAF1-203ENST00000423275 I3L3M4 83 aa13.69□□□□□ -0.22
RAF1-203ENST00000423275 HIST2H2BCQ6DN03 193 aa13.69□□□□□ -0.22
RAF1-203ENST00000423275 C4orf3Q8WVX3 66 aa13.68□□□□□ -0.22
RAF1-203ENST00000423275 MRPL16Q9NX20 251 aaKnown RBP13.68□□□□□ -0.22
RAF1-203ENST00000423275 UBE2D1P51668 147 aa13.68□□□□□ -0.22
RAF1-203ENST00000423275 WFDC11Q8NEX6 87 aa13.68□□□□□ -0.22
RAF1-203ENST00000423275 AMELXQ99217 191 aa13.68□□□□□ -0.22
RAF1-203ENST00000423275 TMEM238LA0A1B0GVL6 79 aa13.67□□□□□ -0.22
RAF1-203ENST00000423275 A6NJY4 79 aa13.67□□□□□ -0.22
RAF1-203ENST00000423275 F8W1H4 67 aa13.67□□□□□ -0.22
RAF1-203ENST00000423275 NFE4Q86UQ8 179 aa13.67□□□□□ -0.22
RAF1-203ENST00000423275 J3QQQ9 107 aa13.66□□□□□ -0.22
RAF1-203ENST00000423275 SFTA2Q6UW10 78 aa13.66□□□□□ -0.22
RAF1-203ENST00000423275 A8MTW9 85 aa13.66□□□□□ -0.22
RAF1-203ENST00000423275 APOMO95445 188 aa13.66□□□□□ -0.22
RAF1-203ENST00000423275 Q9UF83 564 aa13.66□□□□□ -0.22
RAF1-203ENST00000423275 CCDC168Q8NDH2 2452 aa13.66□□□□□ -0.22
RAF1-203ENST00000423275 TENM4Q6N022 2769 aa13.65□□□□□ -0.22
RAF1-203ENST00000423275 Q6ZSV7 163 aa13.65□□□□□ -0.22
RAF1-203ENST00000423275 SH2D6Q7Z4S9 175 aa13.65□□□□□ -0.22
RAF1-203ENST00000423275 SPANXB1Q9NS25 103 aaPredicted RBP13.65□□□□□ -0.22
RAF1-203ENST00000423275 PEMTQ9UBM1 199 aa13.65□□□□□ -0.22
RAF1-203ENST00000423275 NACAE9PAV3 2078 aa13.65□□□□□ -0.22
RAF1-203ENST00000423275 IGLV4-3A0A075B6K6 122 aa13.65□□□□□ -0.22
RAF1-203ENST00000423275 IGHV3-64A0A075B6Q5 118 aa13.65□□□□□ -0.22
RAF1-203ENST00000423275 C11orf44Q8N8P7 122 aa13.65□□□□□ -0.22
RAF1-203ENST00000423275 MAP6D1Q9H9H5 199 aa13.65□□□□□ -0.22
RAF1-203ENST00000423275 TSPAN13O95857 204 aa13.64□□□□□ -0.23
RAF1-203ENST00000423275 COTL1Q14019 142 aa13.64□□□□□ -0.23
RAF1-203ENST00000423275 SLC25A29Q8N8R3 303 aa13.64□□□□□ -0.23
RAF1-203ENST00000423275 PRO0461Q9UI25 63 aa13.64□□□□□ -0.23
RAF1-203ENST00000423275 A0A0J9YXV3 536 aa13.64□□□□□ -0.23
RAF1-203ENST00000423275 IGHV3-30P01768 117 aa13.64□□□□□ -0.23
RAF1-203ENST00000423275 IGHV3-30-5P0DP03 117 aa13.64□□□□□ -0.23
RAF1-203ENST00000423275 DEFB114Q30KQ6 69 aa13.64□□□□□ -0.23
RAF1-203ENST00000423275 ETDBQ3ZM63 59 aa13.64□□□□□ -0.23
RAF1-203ENST00000423275 GAGE13Q4V321 117 aa13.64□□□□□ -0.23
RAF1-203ENST00000423275 TMEM223A0PJW6 202 aa13.63□□□□□ -0.23
RAF1-203ENST00000423275 ZNF22P17026 224 aaPredicted RBP13.63□□□□□ -0.23
RAF1-203ENST00000423275 LGALS3P17931 250 aaKnown RBP13.63□□□□□ -0.23
RAF1-203ENST00000423275 DYNLRB2Q8TF09 96 aa13.63□□□□□ -0.23
RAF1-203ENST00000423275 SPAG8Q99932 426 aaPredicted RBP13.63□□□□□ -0.23
RAF1-203ENST00000423275 FLNAP21333 2647 aaKnown RBP13.63□□□□□ -0.23
RAF1-203ENST00000423275 BAHCC1Q9P281 2608 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms