RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SNAI2O43623 268 aa6.15□□□□□ -1.42
NUP50-206ENST00000422489 IFNA1P01562 189 aa6.15□□□□□ -1.42
NUP50-206ENST00000422489 MGPP08493 103 aa6.15□□□□□ -1.42
NUP50-206ENST00000422489 OR5AL1P0C617 328 aa6.15□□□□□ -1.42
NUP50-206ENST00000422489 SULT1A2P50226 295 aa6.15□□□□□ -1.42
NUP50-206ENST00000422489 RPS20P60866 119 aaKnown RBP6.15□□□□□ -1.42
NUP50-206ENST00000422489 Q5VSD8 79 aa6.15□□□□□ -1.42
NUP50-206ENST00000422489 NEXN-AS1Q8NBZ9 246 aa6.15□□□□□ -1.42
NUP50-206ENST00000422489 OR2D3Q8NGH3 330 aa6.15□□□□□ -1.42
NUP50-206ENST00000422489 C11orf52Q96A22 123 aa6.15□□□□□ -1.42
NUP50-206ENST00000422489 CHCHD5Q9BSY4 110 aa6.15□□□□□ -1.42
NUP50-206ENST00000422489 FAM30AQ9NZY2 134 aa6.15□□□□□ -1.42
NUP50-206ENST00000422489 HSPG2P98160 4391 aa6.14□□□□□ -1.43
NUP50-206ENST00000422489 TRBV6-8A0A0A6YYG3 113 aa6.14□□□□□ -1.43
NUP50-206ENST00000422489 GNG4P50150 75 aa6.14□□□□□ -1.43
NUP50-206ENST00000422489 C15orf54Q8N8G6 183 aa6.14□□□□□ -1.43
NUP50-206ENST00000422489 FER1L6-AS1Q8NA97 138 aa6.14□□□□□ -1.43
NUP50-206ENST00000422489 OR10G8Q8NGN5 311 aa6.14□□□□□ -1.43
NUP50-206ENST00000422489 TMEM70Q9BUB7 260 aa6.14□□□□□ -1.43
NUP50-206ENST00000422489 APOBP04114 4563 aaKnown RBP6.14□□□□□ -1.43
NUP50-206ENST00000422489 PDE6DO43924 150 aa6.13□□□□□ -1.43
NUP50-206ENST00000422489 P01737 135 aa6.13□□□□□ -1.43
NUP50-206ENST00000422489 CRPP02741 224 aa6.13□□□□□ -1.43
NUP50-206ENST00000422489 ANGP03950 147 aaKnown RBP6.13□□□□□ -1.43
NUP50-206ENST00000422489 MEF2BQ02080 365 aaPredicted RBP6.13□□□□□ -1.43
NUP50-206ENST00000422489 GAGE6Q13070 117 aa6.13□□□□□ -1.43
NUP50-206ENST00000422489 LINC01620Q4KN68 170 aa6.13□□□□□ -1.43
NUP50-206ENST00000422489 SLC51BQ86UW2 128 aa6.13□□□□□ -1.43
NUP50-206ENST00000422489 TCTE3Q8IZS6 198 aa6.13□□□□□ -1.43
NUP50-206ENST00000422489 Q8N976 141 aa6.13□□□□□ -1.43
NUP50-206ENST00000422489 AP1S3Q96PC3 154 aa6.13□□□□□ -1.43
NUP50-206ENST00000422489 CHCHD7Q9BUK0 85 aa6.13□□□□□ -1.43
NUP50-206ENST00000422489 KIF25-AS1Q9Y6Z4 181 aa6.13□□□□□ -1.43
NUP50-206ENST00000422489 XKRY2A2RUG3 117 aa6.12□□□□□ -1.43
NUP50-206ENST00000422489 IGLV2-8P01709 118 aa6.12□□□□□ -1.43
NUP50-206ENST00000422489 CACNG7P62955 275 aa6.12□□□□□ -1.43
NUP50-206ENST00000422489 Q0VG73 95 aa6.12□□□□□ -1.43
NUP50-206ENST00000422489 TMEM97Q5BJF2 176 aa6.12□□□□□ -1.43
NUP50-206ENST00000422489 ATRAIDQ6UW56 229 aa6.12□□□□□ -1.43
NUP50-206ENST00000422489 LYZL1Q6UWQ5 148 aa6.12□□□□□ -1.43
NUP50-206ENST00000422489 ENHOQ6UWT2 76 aa6.12□□□□□ -1.43
NUP50-206ENST00000422489 C1orf43Q9BWL3 253 aa6.12□□□□□ -1.43
NUP50-206ENST00000422489 VAX2Q9UIW0 290 aa6.12□□□□□ -1.43
NUP50-206ENST00000422489 hCG_2014768A0A024R1R8 64 aa6.11□□□□□ -1.43
NUP50-206ENST00000422489 C19orf71A6NCJ1 209 aa6.11□□□□□ -1.43
NUP50-206ENST00000422489 C1QBP02746 253 aa6.11□□□□□ -1.43
NUP50-206ENST00000422489 IGLC6P0CF74 106 aa6.11□□□□□ -1.43
NUP50-206ENST00000422489 BCL2P10415 239 aa6.11□□□□□ -1.43
NUP50-206ENST00000422489 MPV17L2Q567V2 206 aa6.11□□□□□ -1.43
NUP50-206ENST00000422489 SUMO4Q6EEV6 95 aa6.11□□□□□ -1.43
NUP50-206ENST00000422489 NTM-AS1Q6ZSK4 140 aa6.11□□□□□ -1.43
NUP50-206ENST00000422489 NUDT10Q8NFP7 164 aa6.11□□□□□ -1.43
NUP50-206ENST00000422489 NUDT11Q96G61 164 aa6.11□□□□□ -1.43
NUP50-206ENST00000422489 BIN3Q9NQY0 253 aa6.11□□□□□ -1.43
NUP50-206ENST00000422489 F2Z2F3 143 aa6.1□□□□□ -1.43
NUP50-206ENST00000422489 H7C1H1 209 aa6.1□□□□□ -1.43
NUP50-206ENST00000422489 M0QY20 66 aa6.1□□□□□ -1.43
NUP50-206ENST00000422489 NTF3P20783 257 aa6.1□□□□□ -1.43
NUP50-206ENST00000422489 NKX2-5P52952 324 aaPredicted RBP6.1□□□□□ -1.43
NUP50-206ENST00000422489 PKIAP61925 76 aa6.1□□□□□ -1.43
NUP50-206ENST00000422489 RBX1P62877 108 aa6.1□□□□□ -1.43
NUP50-206ENST00000422489 TWIST1Q15672 202 aa6.1□□□□□ -1.43
NUP50-206ENST00000422489 Q6ZNX1 250 aa6.1□□□□□ -1.43
NUP50-206ENST00000422489 DEFB104AQ8WTQ1 72 aa6.1□□□□□ -1.43
NUP50-206ENST00000422489 SMIM12Q96EX1 92 aa6.1□□□□□ -1.43
NUP50-206ENST00000422489 TRBV20OR9-2A0A075B6H5 130 aa6.09□□□□□ -1.43
NUP50-206ENST00000422489 TRBV25-1A0A075B6N4 114 aa6.09□□□□□ -1.43
NUP50-206ENST00000422489 IGHV1-24A0A0C4DH33 117 aa6.09□□□□□ -1.43
NUP50-206ENST00000422489 HLA-DQA1P01909 254 aa6.09□□□□□ -1.43
NUP50-206ENST00000422489 TRGC1P0CF51 173 aa6.09□□□□□ -1.43
NUP50-206ENST00000422489 TAGLN2P37802 199 aaKnown RBP6.09□□□□□ -1.43
NUP50-206ENST00000422489 CEBPGP53567 150 aa6.09□□□□□ -1.43
NUP50-206ENST00000422489 RASL11AQ6T310 242 aa6.09□□□□□ -1.43
NUP50-206ENST00000422489 CLPSL2Q6UWE3 100 aa6.09□□□□□ -1.43
NUP50-206ENST00000422489 AKAP14Q86UN6 197 aa6.09□□□□□ -1.43
NUP50-206ENST00000422489 LINC00269Q8N2A0 174 aa6.09□□□□□ -1.43
NUP50-206ENST00000422489 OCC1Q8TAD7 63 aa6.09□□□□□ -1.43
NUP50-206ENST00000422489 RNASE7Q9H1E1 156 aaKnown RBP6.09□□□□□ -1.43
NUP50-206ENST00000422489 BLOC1S1P78537 153 aa6.08□□□□□ -1.44
NUP50-206ENST00000422489 C14orf177Q52M58 125 aa6.08□□□□□ -1.44
NUP50-206ENST00000422489 ALKAL2Q6UX46 152 aa6.08□□□□□ -1.44
NUP50-206ENST00000422489 C9orf62Q8N4C0 152 aa6.08□□□□□ -1.44
NUP50-206ENST00000422489 DPH3P1Q9H4G8 78 aa6.08□□□□□ -1.44
NUP50-206ENST00000422489 NIT2Q9NQR4 276 aa6.08□□□□□ -1.44
NUP50-206ENST00000422489 USP17L23D6RBM5 183 aa6.07□□□□□ -1.44
NUP50-206ENST00000422489 PLA2G1BP04054 148 aaKnown RBP6.07□□□□□ -1.44
NUP50-206ENST00000422489 MIAQ16674 131 aa6.07□□□□□ -1.44
NUP50-206ENST00000422489 IQCJQ1A5X6 159 aa6.07□□□□□ -1.44
NUP50-206ENST00000422489 WDR73Q6P4I2 378 aa6.07□□□□□ -1.44
NUP50-206ENST00000422489 RPP21Q9H633 154 aaKnown RBP6.07□□□□□ -1.44
NUP50-206ENST00000422489 IGLV10-54A0A075B6I4 117 aa6.06□□□□□ -1.44
NUP50-206ENST00000422489 K7EN84 100 aa6.06□□□□□ -1.44
NUP50-206ENST00000422489 UBE2L6O14933 153 aa6.06□□□□□ -1.44
NUP50-206ENST00000422489 GATCO43716 136 aaKnown RBP6.06□□□□□ -1.44
NUP50-206ENST00000422489 Q6ZSA8 131 aa6.06□□□□□ -1.44
NUP50-206ENST00000422489 SMIM15Q7Z3B0 74 aa6.06□□□□□ -1.44
NUP50-206ENST00000422489 TMEM243Q9BU79 118 aa6.06□□□□□ -1.44
NUP50-206ENST00000422489 TRAV26-2A0A0B4J265 109 aa6.05□□□□□ -1.44
NUP50-206ENST00000422489 AMTP48728 403 aa6.05□□□□□ -1.44
NUP50-206ENST00000422489 FOXA3P55318 350 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms