RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 ODF1Q14990 250 aa5.21□□□□□ -1.58
VIM-202ENST00000421459 DNLZQ5SXM8 178 aa5.21□□□□□ -1.58
VIM-202ENST00000421459 CLPSL2Q6UWE3 100 aa5.21□□□□□ -1.58
VIM-202ENST00000421459 C1orf43Q9BWL3 253 aa5.21□□□□□ -1.58
VIM-202ENST00000421459 ACTR3CQ9C0K3 210 aaPredicted RBP5.21□□□□□ -1.58
VIM-202ENST00000421459 TRBV7-3A0A075B6L6 115 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 TRBV6-8A0A0A6YYG3 113 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 A0A1W2PRE2 83 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 MAP1LC3B2A6NCE7 125 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 FAM74A7A6NL05 159 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 RHODO00212 210 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 ANGP03950 147 aaKnown RBP5.2□□□□□ -1.58
VIM-202ENST00000421459 SSTP61278 116 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 RPL36AP83881 106 aaKnown RBP5.2□□□□□ -1.58
VIM-202ENST00000421459 RPL19P84098 196 aaKnown RBP5.2□□□□□ -1.58
VIM-202ENST00000421459 ELOBQ15370 118 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 KCNIP4Q6PIL6 250 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 NTM-AS1Q6ZSK4 140 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 NEXN-AS1Q8NBZ9 246 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 RPL36ALQ969Q0 106 aaKnown RBP5.2□□□□□ -1.58
VIM-202ENST00000421459 MAP1LC3BQ9GZQ8 125 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 PHLDA3Q9Y5J5 127 aa5.2□□□□□ -1.58
VIM-202ENST00000421459 RAB19A4D1S5 217 aa5.19□□□□□ -1.58
VIM-202ENST00000421459 TEX46H3BTG2 121 aa5.19□□□□□ -1.58
VIM-202ENST00000421459 CCL20P78556 96 aa5.19□□□□□ -1.58
VIM-202ENST00000421459 Q0VG73 95 aa5.19□□□□□ -1.58
VIM-202ENST00000421459 FAM162BQ5T6X4 162 aa5.19□□□□□ -1.58
VIM-202ENST00000421459 KRTAP26-1Q6PEX3 210 aa5.19□□□□□ -1.58
VIM-202ENST00000421459 COMMD7Q86VX2 200 aa5.19□□□□□ -1.58
VIM-202ENST00000421459 SLC7A5P1Q8MH63 180 aa5.19□□□□□ -1.58
VIM-202ENST00000421459 SFT2D1Q8WV19 159 aa5.19□□□□□ -1.58
VIM-202ENST00000421459 CHCHD7Q9BUK0 85 aa5.19□□□□□ -1.58
VIM-202ENST00000421459 IGLV10-54A0A075B6I4 117 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 TRBV10-1A0A0K0K1A3 114 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 CRPP02741 224 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 GAGE6Q13070 117 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 ZNF56Q15929 161 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 ZNF674Q2M3X9 581 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 LINC01559Q495D7 138 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 C14orf177Q52M58 125 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 UQCC3Q6UW78 93 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 SDIM1Q6ZPB5 146 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 LINC00269Q8N2A0 174 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 C9orf163Q8N9P6 203 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 OR10AG1Q8NH19 301 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 FAM210AQ96ND0 272 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 CHCHD5Q9BSY4 110 aa5.18□□□□□ -1.58
VIM-202ENST00000421459 NDUFS6O75380 124 aaKnown RBP5.17□□□□□ -1.58
VIM-202ENST00000421459 CHTF8P0CG12 524 aa5.17□□□□□ -1.58
VIM-202ENST00000421459 TAGLN2P37802 199 aaKnown RBP5.17□□□□□ -1.58
VIM-202ENST00000421459 RAB4BP61018 213 aa5.17□□□□□ -1.58
VIM-202ENST00000421459 RBX1P62877 108 aa5.17□□□□□ -1.58
VIM-202ENST00000421459 PRR27Q6MZM9 219 aa5.17□□□□□ -1.58
VIM-202ENST00000421459 COX8CQ7Z4L0 72 aa5.17□□□□□ -1.58
VIM-202ENST00000421459 ZFP82Q8N141 532 aa5.17□□□□□ -1.58
VIM-202ENST00000421459 OR10G8Q8NGN5 311 aa5.17□□□□□ -1.58
VIM-202ENST00000421459 HIST1H2BAQ96A08 127 aa5.17□□□□□ -1.58
VIM-202ENST00000421459 SMDT1Q9H4I9 107 aa5.17□□□□□ -1.58
VIM-202ENST00000421459 ZFP30Q9Y2G7 519 aa5.17□□□□□ -1.58
VIM-202ENST00000421459 ATP6V1G1O75348 118 aa5.16□□□□□ -1.58
VIM-202ENST00000421459 LTAP01374 205 aa5.16□□□□□ -1.58
VIM-202ENST00000421459 IFNA1P01562 189 aa5.16□□□□□ -1.58
VIM-202ENST00000421459 SLPIP03973 132 aa5.16□□□□□ -1.58
VIM-202ENST00000421459 BCL2P10415 239 aa5.16□□□□□ -1.58
VIM-202ENST00000421459 UBE2G1P62253 170 aa5.16□□□□□ -1.58
VIM-202ENST00000421459 SRSF3P84103 164 aaKnown RBP5.16□□□□□ -1.58
VIM-202ENST00000421459 CST9LP1Q5W188 147 aa5.16□□□□□ -1.58
VIM-202ENST00000421459 DGAT2L7PQ6IED9 249 aa5.16□□□□□ -1.58
VIM-202ENST00000421459 FMC1Q96HJ9 113 aa5.16□□□□□ -1.58
VIM-202ENST00000421459 MANBALQ9NQG1 85 aa5.16□□□□□ -1.58
VIM-202ENST00000421459 PRR34Q9NV39 138 aa5.16□□□□□ -1.58
VIM-202ENST00000421459 A0A1B0GV50 99 aa5.15□□□□□ -1.59
VIM-202ENST00000421459 C9JQL5 133 aa5.15□□□□□ -1.59
VIM-202ENST00000421459 F5H697 171 aa5.15□□□□□ -1.59
VIM-202ENST00000421459 PEA15Q15121 130 aa5.15□□□□□ -1.59
VIM-202ENST00000421459 MIAQ16674 131 aa5.15□□□□□ -1.59
VIM-202ENST00000421459 DPH3Q96FX2 82 aa5.15□□□□□ -1.59
VIM-202ENST00000421459 DERL1Q9BUN8 251 aa5.15□□□□□ -1.59
VIM-202ENST00000421459 GFRA4Q9GZZ7 299 aa5.15□□□□□ -1.59
VIM-202ENST00000421459 GNG13Q9P2W3 67 aa5.15□□□□□ -1.59
VIM-202ENST00000421459 VAX2Q9UIW0 290 aa5.15□□□□□ -1.59
VIM-202ENST00000421459 LPAP08519 4548 aa5.14□□□□□ -1.59
VIM-202ENST00000421459 TRBV6-1A0A0K0K1D8 114 aa5.14□□□□□ -1.59
VIM-202ENST00000421459 hDV102S1A0JD36 115 aa5.14□□□□□ -1.59
VIM-202ENST00000421459 PAGE4O60829 102 aa5.14□□□□□ -1.59
VIM-202ENST00000421459 AKR1C3P42330 323 aa5.14□□□□□ -1.59
VIM-202ENST00000421459 MEF2BQ02080 365 aaPredicted RBP5.14□□□□□ -1.59
VIM-202ENST00000421459 C10orf91Q5T1B1 145 aa5.14□□□□□ -1.59
VIM-202ENST00000421459 EIF5A2Q9GZV4 153 aaKnown RBP5.14□□□□□ -1.59
VIM-202ENST00000421459 KIF25-AS1Q9Y6Z4 181 aa5.14□□□□□ -1.59
VIM-202ENST00000421459 IGLV4-60A0A075B6I1 120 aa5.13□□□□□ -1.59
VIM-202ENST00000421459 A0A087WYN8 130 aa5.13□□□□□ -1.59
VIM-202ENST00000421459 SCO2A0A1W2PP80 73 aa5.13□□□□□ -1.59
VIM-202ENST00000421459 TMEM218A2RU14 115 aa5.13□□□□□ -1.59
VIM-202ENST00000421459 TMEM250H0YL14 139 aa5.13□□□□□ -1.59
VIM-202ENST00000421459 PHOX2AO14813 284 aa5.13□□□□□ -1.59
VIM-202ENST00000421459 SNAI2O43623 268 aa5.13□□□□□ -1.59
VIM-202ENST00000421459 SRP19P09132 144 aaKnown RBP5.13□□□□□ -1.59
VIM-202ENST00000421459 GZMBP10144 247 aa5.13□□□□□ -1.59
VIM-202ENST00000421459 S100A1P23297 94 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms