RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RYR1P21817 5038 aa4.72□□□□□ -1.65
HMGN1-205ENST00000419378 TMSB15BA0A087X1C1 80 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 IGHV3-73A0A0B4J1V6 119 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 TRBV6-4A0A1B0GX49 114 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 TEX46H3BTG2 121 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 CIDEAO60543 219 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 S100A9P06702 114 aaKnown RBP4.71□□□□□ -1.66
HMGN1-205ENST00000419378 ARMS2P0C7Q2 107 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 RHOHQ15669 191 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 BAGE2Q86Y30 109 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 WFDC10BQ8IUB3 73 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 C11orf52Q96A22 123 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 TXNDC17Q9BRA2 123 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 PARLQ9H300 379 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 SCRT2Q9NQ03 307 aa4.71□□□□□ -1.66
HMGN1-205ENST00000419378 APOBP04114 4563 aaKnown RBP4.71□□□□□ -1.66
HMGN1-205ENST00000419378 A8MWV9 139 aa4.7□□□□□ -1.66
HMGN1-205ENST00000419378 MGST1P10620 155 aaKnown RBP4.7□□□□□ -1.66
HMGN1-205ENST00000419378 RPL35P42766 123 aaKnown RBP4.7□□□□□ -1.66
HMGN1-205ENST00000419378 LINC00315P59091 139 aa4.7□□□□□ -1.66
HMGN1-205ENST00000419378 CENPWQ5EE01 88 aa4.7□□□□□ -1.66
HMGN1-205ENST00000419378 UFSP1Q6NVU6 142 aa4.7□□□□□ -1.66
HMGN1-205ENST00000419378 ZFP2Q6ZN57 461 aa4.7□□□□□ -1.66
HMGN1-205ENST00000419378 SH2D6Q7Z4S9 175 aa4.7□□□□□ -1.66
HMGN1-205ENST00000419378 PRADC1Q9BSG0 188 aa4.7□□□□□ -1.66
HMGN1-205ENST00000419378 DERL1Q9BUN8 251 aa4.7□□□□□ -1.66
HMGN1-205ENST00000419378 SAMD10Q9BYL1 202 aa4.7□□□□□ -1.66
HMGN1-205ENST00000419378 JPT2Q9H910 190 aa4.7□□□□□ -1.66
HMGN1-205ENST00000419378 HSPG2P98160 4391 aa4.7□□□□□ -1.66
HMGN1-205ENST00000419378 IGLV5-45A0A087WSX0 123 aa4.69□□□□□ -1.66
HMGN1-205ENST00000419378 A0A1B0GUV1 79 aa4.69□□□□□ -1.66
HMGN1-205ENST00000419378 A0A1B0GVG6 124 aa4.69□□□□□ -1.66
HMGN1-205ENST00000419378 M0R381 172 aa4.69□□□□□ -1.66
HMGN1-205ENST00000419378 IFNA1P01562 189 aa4.69□□□□□ -1.66
HMGN1-205ENST00000419378 CXCL1P09341 107 aa4.69□□□□□ -1.66
HMGN1-205ENST00000419378 BCL2P10415 239 aa4.69□□□□□ -1.66
HMGN1-205ENST00000419378 RPL19P84098 196 aaKnown RBP4.69□□□□□ -1.66
HMGN1-205ENST00000419378 MEF2BQ02080 365 aaPredicted RBP4.69□□□□□ -1.66
HMGN1-205ENST00000419378 PRR27Q6MZM9 219 aa4.69□□□□□ -1.66
HMGN1-205ENST00000419378 PHLDA3Q9Y5J5 127 aa4.69□□□□□ -1.66
HMGN1-205ENST00000419378 LY96Q9Y6Y9 160 aa4.69□□□□□ -1.66
HMGN1-205ENST00000419378 RAB19A4D1S5 217 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 PDE6DO43924 150 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 DNAH10OSP0CZ25 163 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 LINC00694P0DN24 101 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 ERVFC1-1P60608 527 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 GAGE5Q13069 117 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 GAGE6Q13070 117 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 FAM74A4Q5TZK3 123 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 ALKAL2Q6UX46 152 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 Q6ZRN7 208 aaPredicted RBP4.68□□□□□ -1.66
HMGN1-205ENST00000419378 ZFP82Q8N141 532 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 OR10AG1Q8NH19 301 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 SFRP2Q96HF1 295 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 MED9Q9NWA0 146 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 VAX2Q9UIW0 290 aa4.68□□□□□ -1.66
HMGN1-205ENST00000419378 TRBV20OR9-2A0A075B6H5 130 aa4.67□□□□□ -1.66
HMGN1-205ENST00000419378 TRAV9-2A0A087WT02 112 aa4.67□□□□□ -1.66
HMGN1-205ENST00000419378 SNAI2O43623 268 aa4.67□□□□□ -1.66
HMGN1-205ENST00000419378 IGLV2-8P01709 118 aa4.67□□□□□ -1.66
HMGN1-205ENST00000419378 CRYGDP07320 174 aa4.67□□□□□ -1.66
HMGN1-205ENST00000419378 OR5AL1P0C617 328 aa4.67□□□□□ -1.66
HMGN1-205ENST00000419378 EVI2AP22794 236 aa4.67□□□□□ -1.66
HMGN1-205ENST00000419378 TAGLN2P37802 199 aaKnown RBP4.67□□□□□ -1.66
HMGN1-205ENST00000419378 GNG4P50150 75 aa4.67□□□□□ -1.66
HMGN1-205ENST00000419378 NKX2-5P52952 324 aaPredicted RBP4.67□□□□□ -1.66
HMGN1-205ENST00000419378 C14orf178Q8N769 122 aaPredicted RBP4.67□□□□□ -1.66
HMGN1-205ENST00000419378 ATP6V0E2Q8NHE4 81 aa4.67□□□□□ -1.66
HMGN1-205ENST00000419378 SMIM12Q96EX1 92 aa4.67□□□□□ -1.66
HMGN1-205ENST00000419378 Q9UF83 564 aa4.67□□□□□ -1.66
HMGN1-205ENST00000419378 TRAV8-6A0A0B4J262 113 aa4.66□□□□□ -1.66
HMGN1-205ENST00000419378 IGHV3-38A0A0C4DH36 116 aa4.66□□□□□ -1.66
HMGN1-205ENST00000419378 MUC21A0A0G2JKD1 596 aa4.66□□□□□ -1.66
HMGN1-205ENST00000419378 MUC21A0A140T8X8 626 aa4.66□□□□□ -1.66
HMGN1-205ENST00000419378 K7EP13 123 aa4.66□□□□□ -1.66
HMGN1-205ENST00000419378 LINC01556Q5JQF7 62 aa4.66□□□□□ -1.66
HMGN1-205ENST00000419378 OR10J3Q5JRS4 329 aa4.66□□□□□ -1.66
HMGN1-205ENST00000419378 LELP1Q5T871 98 aa4.66□□□□□ -1.66
HMGN1-205ENST00000419378 SPANXN1Q5VSR9 72 aa4.66□□□□□ -1.66
HMGN1-205ENST00000419378 C10orf126Q8N4M7 172 aa4.66□□□□□ -1.66
HMGN1-205ENST00000419378 GTSF1LQ9H1H1 148 aa4.66□□□□□ -1.66
HMGN1-205ENST00000419378 TRBV10-1A0A0K0K1A3 114 aa4.65□□□□□ -1.67
HMGN1-205ENST00000419378 C19orf71A6NCJ1 209 aa4.65□□□□□ -1.67
HMGN1-205ENST00000419378 C16orf90A8MZG2 172 aa4.65□□□□□ -1.67
HMGN1-205ENST00000419378 P01737 135 aa4.65□□□□□ -1.67
HMGN1-205ENST00000419378 GZMBP10144 247 aa4.65□□□□□ -1.67
HMGN1-205ENST00000419378 SPATA12Q7Z6I5 190 aa4.65□□□□□ -1.67
HMGN1-205ENST00000419378 NFE4Q86UQ8 179 aa4.65□□□□□ -1.67
HMGN1-205ENST00000419378 FER1L6-AS1Q8NA97 138 aa4.65□□□□□ -1.67
HMGN1-205ENST00000419378 OR2D3Q8NGH3 330 aa4.65□□□□□ -1.67
HMGN1-205ENST00000419378 LYPD6BQ8NI32 183 aa4.65□□□□□ -1.67
HMGN1-205ENST00000419378 PCLOQ9Y6V0 5065 aa4.64□□□□□ -1.67
HMGN1-205ENST00000419378 ABCA13Q86UQ4 5058 aa4.64□□□□□ -1.67
HMGN1-205ENST00000419378 A0A087WWC5 75 aa4.64□□□□□ -1.67
HMGN1-205ENST00000419378 RBFOX3A6NFN3 312 aa4.64□□□□□ -1.67
HMGN1-205ENST00000419378 IGHV3-30P01768 117 aa4.64□□□□□ -1.67
HMGN1-205ENST00000419378 IGHV3-33P01772 117 aa4.64□□□□□ -1.67
HMGN1-205ENST00000419378 IGLC6P0CF74 106 aa4.64□□□□□ -1.67
HMGN1-205ENST00000419378 IGHV3-30-3P0DP02 117 aa4.64□□□□□ -1.67
HMGN1-205ENST00000419378 IGHV3-30-5P0DP03 117 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 421.4 ms