RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 DNAJC30Q96LL9 226 aa10.66□□□□□ -0.7
HLA-DPA1-242ENST00000419277 JPT2Q9H910 190 aa10.66□□□□□ -0.7
HLA-DPA1-242ENST00000419277 SPRY2O43597 315 aa10.65□□□□□ -0.7
HLA-DPA1-242ENST00000419277 HERVK_113P61574 105 aa10.65□□□□□ -0.7
HLA-DPA1-242ENST00000419277 OR11H2Q8NH07 326 aa10.65□□□□□ -0.7
HLA-DPA1-242ENST00000419277 LINC01587Q99440 93 aa10.64□□□□□ -0.71
HLA-DPA1-242ENST00000419277 E9PLD3 99 aa10.64□□□□□ -0.71
HLA-DPA1-242ENST00000419277 UFSP1Q6NVU6 142 aa10.64□□□□□ -0.71
HLA-DPA1-242ENST00000419277 PCP2Q8IVA1 136 aa10.64□□□□□ -0.71
HLA-DPA1-242ENST00000419277 C11orf72Q8NBR9 251 aa10.64□□□□□ -0.71
HLA-DPA1-242ENST00000419277 C1QTNF4Q9BXJ3 329 aa10.64□□□□□ -0.71
HLA-DPA1-242ENST00000419277 SORL1Q92673 2214 aa10.64□□□□□ -0.71
HLA-DPA1-242ENST00000419277 PRSS29PA6NIE9 313 aa10.63□□□□□ -0.71
HLA-DPA1-242ENST00000419277 IGLV1-51P01701 117 aa10.63□□□□□ -0.71
HLA-DPA1-242ENST00000419277 PROK1P58294 105 aa10.63□□□□□ -0.71
HLA-DPA1-242ENST00000419277 HIST2H2BCQ6DN03 193 aa10.63□□□□□ -0.71
HLA-DPA1-242ENST00000419277 NDUFA11Q86Y39 141 aa10.63□□□□□ -0.71
HLA-DPA1-242ENST00000419277 PYGO1Q9Y3Y4 419 aa10.63□□□□□ -0.71
HLA-DPA1-242ENST00000419277 CIDEAO60543 219 aa10.62□□□□□ -0.71
HLA-DPA1-242ENST00000419277 MORN3Q6PF18 240 aaPredicted RBP10.62□□□□□ -0.71
HLA-DPA1-242ENST00000419277 GTSCR1Q86UQ5 136 aa10.62□□□□□ -0.71
HLA-DPA1-242ENST00000419277 C20orf203Q8NBC4 194 aa10.62□□□□□ -0.71
HLA-DPA1-242ENST00000419277 ZNF469Q96JG9 3925 aaPredicted RBP10.62□□□□□ -0.71
HLA-DPA1-242ENST00000419277 TRBV25-1A0A075B6N4 114 aa10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 TAX1BP3O14907 124 aa10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 IGHV3-53P01767 116 aa10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 TMEM263Q8WUH6 116 aaKnown RBP10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 CHAC1Q9BUX1 264 aa10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 TP73-AS1Q9UF72 201 aa10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 IGKV2D-26A0A0A0MRZ7 120 aa10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 A0A1W2PRX2 142 aa10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 H3BRM9 83 aa10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 TSHBP01222 138 aa10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 UBE2V1Q13404 147 aa10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 IL17DQ8TAD2 202 aa10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 TNFRSF18Q9Y5U5 241 aa10.61□□□□□ -0.71
HLA-DPA1-242ENST00000419277 C11orf86A6NJI1 115 aa10.6□□□□□ -0.71
HLA-DPA1-242ENST00000419277 SAP30O75446 220 aa10.6□□□□□ -0.71
HLA-DPA1-242ENST00000419277 CFAP126Q5VTH2 177 aa10.6□□□□□ -0.71
HLA-DPA1-242ENST00000419277 TM2D2Q9BX73 214 aa10.6□□□□□ -0.71
HLA-DPA1-242ENST00000419277 CST9LQ9H4G1 147 aa10.6□□□□□ -0.71
HLA-DPA1-242ENST00000419277 ITPR2Q14571 2701 aa10.6□□□□□ -0.71
HLA-DPA1-242ENST00000419277 NBPF19A0A087WUL8 3843 aa10.59□□□□□ -0.71
HLA-DPA1-242ENST00000419277 RS1O15537 224 aa10.59□□□□□ -0.71
HLA-DPA1-242ENST00000419277 NFE4Q86UQ8 179 aa10.59□□□□□ -0.71
HLA-DPA1-242ENST00000419277 HIVEP2P31629 2446 aa10.59□□□□□ -0.71
HLA-DPA1-242ENST00000419277 HTN1P15515 57 aa10.58□□□□□ -0.72
HLA-DPA1-242ENST00000419277 TRBV10-1A0A0K0K1A3 114 aa10.58□□□□□ -0.72
HLA-DPA1-242ENST00000419277 MYMXA0A1B0GTQ4 84 aa10.58□□□□□ -0.72
HLA-DPA1-242ENST00000419277 ZNF124Q15973 351 aa10.58□□□□□ -0.72
HLA-DPA1-242ENST00000419277 NEGR1Q7Z3B1 354 aa10.58□□□□□ -0.72
HLA-DPA1-242ENST00000419277 RNASE8Q8TDE3 154 aaKnown RBP10.58□□□□□ -0.72
HLA-DPA1-242ENST00000419277 SPANXA1Q9NS26 97 aa10.58□□□□□ -0.72
HLA-DPA1-242ENST00000419277 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
HLA-DPA1-242ENST00000419277 IGLV4-69A0A075B6H9 119 aa10.57□□□□□ -0.72
HLA-DPA1-242ENST00000419277 TRAV8-6A0A0B4J262 113 aa10.57□□□□□ -0.72
HLA-DPA1-242ENST00000419277 ADARB2-AS1A8MUL3 147 aa10.57□□□□□ -0.72
HLA-DPA1-242ENST00000419277 INSL3P51460 131 aa10.57□□□□□ -0.72
HLA-DPA1-242ENST00000419277 PTTG1IPP53801 180 aa10.57□□□□□ -0.72
HLA-DPA1-242ENST00000419277 SMAGPQ0VAQ4 97 aa10.57□□□□□ -0.72
HLA-DPA1-242ENST00000419277 C11orf44Q8N8P7 122 aa10.57□□□□□ -0.72
HLA-DPA1-242ENST00000419277 RPL39P62891 51 aaKnown RBP10.56□□□□□ -0.72
HLA-DPA1-242ENST00000419277 DAZ2Q13117 558 aaKnown RBP10.56□□□□□ -0.72
HLA-DPA1-242ENST00000419277 CEND1Q8N111 149 aa10.56□□□□□ -0.72
HLA-DPA1-242ENST00000419277 SVIPQ8NHG7 77 aa10.56□□□□□ -0.72
HLA-DPA1-242ENST00000419277 C16orf74Q96GX8 76 aa10.56□□□□□ -0.72
HLA-DPA1-242ENST00000419277 XCL2Q9UBD3 114 aa10.56□□□□□ -0.72
HLA-DPA1-242ENST00000419277 VAMP3Q15836 100 aa10.55□□□□□ -0.72
HLA-DPA1-242ENST00000419277 C1orf158Q8N1D5 194 aa10.55□□□□□ -0.72
HLA-DPA1-242ENST00000419277 PRADC1Q9BSG0 188 aa10.55□□□□□ -0.72
HLA-DPA1-242ENST00000419277 C9orf118A6NHY6 69 aa10.55□□□□□ -0.72
HLA-DPA1-242ENST00000419277 P0DMU3 169 aa10.55□□□□□ -0.72
HLA-DPA1-242ENST00000419277 FAM231AP0DMU4 169 aa10.55□□□□□ -0.72
HLA-DPA1-242ENST00000419277 FAM231CP0DMU5 169 aa10.55□□□□□ -0.72
HLA-DPA1-242ENST00000419277 ACANP16112 2415 aa10.54□□□□□ -0.72
HLA-DPA1-242ENST00000419277 TRAV4A0A0B4J268 109 aa10.54□□□□□ -0.72
HLA-DPA1-242ENST00000419277 TMEM238LA0A1B0GVL6 79 aa10.54□□□□□ -0.72
HLA-DPA1-242ENST00000419277 A6NJY4 79 aa10.54□□□□□ -0.72
HLA-DPA1-242ENST00000419277 GTF2H5Q6ZYL4 71 aa10.54□□□□□ -0.72
HLA-DPA1-242ENST00000419277 VCX2Q9H322 139 aa10.54□□□□□ -0.72
HLA-DPA1-242ENST00000419277 SMIM13P0DJ93 91 aa10.53□□□□□ -0.72
HLA-DPA1-242ENST00000419277 COTL1Q14019 142 aa10.53□□□□□ -0.72
HLA-DPA1-242ENST00000419277 TIMM21Q9BVV7 248 aa10.53□□□□□ -0.72
HLA-DPA1-242ENST00000419277 MTORP42345 2549 aa10.53□□□□□ -0.72
HLA-DPA1-242ENST00000419277 AKAP9Q99996 3911 aa10.53□□□□□ -0.72
HLA-DPA1-242ENST00000419277 IGLV4-3A0A075B6K6 122 aa10.53□□□□□ -0.72
HLA-DPA1-242ENST00000419277 LY6G6DO95868 133 aa10.53□□□□□ -0.72
HLA-DPA1-242ENST00000419277 PF4P02776 101 aa10.53□□□□□ -0.72
HLA-DPA1-242ENST00000419277 AZU1P20160 251 aa10.53□□□□□ -0.72
HLA-DPA1-242ENST00000419277 GCSHP23434 173 aa10.53□□□□□ -0.72
HLA-DPA1-242ENST00000419277 OR4C5Q8NGB2 326 aa10.53□□□□□ -0.72
HLA-DPA1-242ENST00000419277 AMELXQ99217 191 aa10.53□□□□□ -0.72
HLA-DPA1-242ENST00000419277 WNK1Q9H4A3 2382 aa10.52□□□□□ -0.72
HLA-DPA1-242ENST00000419277 TCTAP57738 103 aa10.52□□□□□ -0.73
HLA-DPA1-242ENST00000419277 C19orf73Q9NVV2 129 aa10.52□□□□□ -0.73
HLA-DPA1-242ENST00000419277 MRPL16Q9NX20 251 aaKnown RBP10.52□□□□□ -0.73
HLA-DPA1-242ENST00000419277 ZNF815PA8K554 130 aa10.51□□□□□ -0.73
HLA-DPA1-242ENST00000419277 DAZ4Q86SG3 579 aaKnown RBP10.51□□□□□ -0.73
HLA-DPA1-242ENST00000419277 HIST1H4GQ99525 98 aa10.51□□□□□ -0.73
HLA-DPA1-242ENST00000419277 DAZ3Q9NR90 486 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms