RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 DLX4Q92988 240 aaPredicted RBP8.68□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 ANKRD17O75179 2603 aaKnown RBP8.67□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 PSMB2P49721 201 aa8.67□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 PEMTQ9UBM1 199 aa8.67□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 IGHV3-64A0A075B6Q5 118 aa8.67□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 DEFB136Q30KP8 78 aa8.67□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 OPRPNQ99935 248 aaPredicted RBP8.66□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 A0A0J9YY99 117 aa8.66□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 NSUN5P1Q3KNT7 163 aa8.66□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 SH2D6Q7Z4S9 175 aa8.66□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 C20orf203Q8NBC4 194 aa8.66□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 CD28P10747 220 aa8.66□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 SLURP1P55000 103 aa8.66□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 RAX2Q96IS3 184 aa8.66□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 PTPN13Q12923 2485 aa8.66□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 ZFYVE26Q68DK2 2539 aa8.65□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 Q6YL49 198 aa8.65□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 ZNRF2Q8NHG8 242 aa8.65□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 ZNF418Q8TF45 676 aaPredicted RBP8.65□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 LINC01587Q99440 93 aa8.65□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 ZNF702PQ9H963 129 aa8.64□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 A8MWV9 139 aa8.64□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 TRAV2A0A0B4J234 112 aa8.64□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 ZNF415Q09FC8 603 aa8.64□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 Q1RN00 199 aa8.64□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 MORN3Q6PF18 240 aaPredicted RBP8.64□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 SLC25A29Q8N8R3 303 aa8.64□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 SPANXB1Q9NS25 103 aaPredicted RBP8.64□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 CRYBG3Q68DQ2 2970 aa8.63□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 A0A0J9YXV3 536 aa8.63□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 SIGMAR1Q99720 223 aa8.63□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 IGSF10Q6WRI0 2623 aa8.63□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 LEPROTO15243 131 aa8.63□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 UBE2D1P51668 147 aa8.63□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 NDUFA11Q86Y39 141 aa8.63□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 SPXQ9BT56 116 aa8.63□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 TSSC4Q9Y5U2 329 aaPredicted RBP8.63□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 VPS13CQ709C8 3753 aa8.63□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 ZNF462Q96JM2 2506 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 TMEM238C9JI98 176 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 H7C2G1 150 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 M0R2P5 195 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 TSPAN13O95857 204 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 NFE4Q86UQ8 179 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 GTSF1LQ9H1H1 148 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 CELSR2Q9HCU4 2923 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 ZFHX3Q15911 3703 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 PRSS2P07478 247 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 TSPEAR-AS2P59090 65 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 PRO1854Q9UHT4 67 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 TLN2Q9Y4G6 2542 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 H3BMM0 161 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 RHODO00212 210 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 DGAT2L7PQ6IED9 249 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 TMEM61Q8N0U2 210 aa8.62□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 NOTCH3Q9UM47 2321 aa8.61□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 PRB1P04280 392 aa8.61□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 P0DMU3 169 aa8.61□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 FAM231AP0DMU4 169 aa8.61□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 FAM231CP0DMU5 169 aa8.61□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 IGHV4-31P0DP07 118 aa8.61□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 Q5PR19 223 aa8.61□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 TIMM21Q9BVV7 248 aa8.61□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 IGLV4-3A0A075B6K6 122 aa8.61□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 C10orf126Q8N4M7 172 aa8.61□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 ABCA12Q86UK0 2595 aa8.61□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 TRBV20-1A0A075B6N2 111 aa8.6□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 TMEM223A0PJW6 202 aa8.6□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 GAGE12HA6NDE8 117 aa8.6□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 IGHV3-30P01768 117 aa8.6□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 IGHV3-30-5P0DP03 117 aa8.6□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 IGHV3OR16-12A0A075B7B8 117 aa8.6□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 ZNF22P17026 224 aaPredicted RBP8.6□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 SMAGPQ0VAQ4 97 aa8.6□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 C18orf65Q6ZTR6 163 aa8.6□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 GEMIN7Q9H840 131 aaKnown RBP8.6□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 INSP01308 110 aa8.59□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 SPAG8Q99932 426 aaPredicted RBP8.59□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 CFC1BP0CG36 223 aa8.59□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 CFC1P0CG37 223 aa8.59□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 PROK1P58294 105 aa8.59□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 ERG28Q9UKR5 140 aa8.59□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 A4D1N5 150 aa8.59□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 RNASE13Q5GAN3 156 aaKnown RBP8.59□□□□□ -1.03
CSPG4P3Y-201ENST00000418188 PRM2P04554 102 aa8.58□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 ZANQ9Y493 2812 aa8.58□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.58□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 RBMY1A1P0DJD3 496 aaKnown RBP8.58□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 RBMY1CP0DJD4 496 aa8.58□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 RBMY1FQ15415 496 aaKnown RBP8.58□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 Q96MF0 132 aa8.58□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 A0A096LNT2 108 aa8.58□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 AZU1P20160 251 aa8.58□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 CEMP1Q6PRD7 247 aaPredicted RBP8.58□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 UTP20O75691 2785 aaKnown RBP8.58□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 DEFB113Q30KQ7 82 aa8.57□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 RNF152Q8N8N0 203 aa8.57□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 PYGO1Q9Y3Y4 419 aa8.57□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 ADARB2-AS1A8MUL3 147 aa8.57□□□□□ -1.04
CSPG4P3Y-201ENST00000418188 STHQ8IWL8 128 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms