RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 ZNF580Q9UK33 172 aa10.37□□□□□ -0.75
LINC00940-201ENST00000418006 OTOGQ6ZRI0 2925 aa10.37□□□□□ -0.75
LINC00940-201ENST00000418006 IGHV4OR15-8A0A075B7B6 117 aa10.37□□□□□ -0.75
LINC00940-201ENST00000418006 A0A087WW49 117 aa10.37□□□□□ -0.75
LINC00940-201ENST00000418006 ZNF688P0C7X2 276 aa10.37□□□□□ -0.75
LINC00940-201ENST00000418006 GPHB5Q86YW7 130 aa10.37□□□□□ -0.75
LINC00940-201ENST00000418006 C11orf44Q8N8P7 122 aa10.37□□□□□ -0.75
LINC00940-201ENST00000418006 DUX3Q96PT4 197 aa10.37□□□□□ -0.75
LINC00940-201ENST00000418006 ANK3Q12955 4377 aaKnown RBP10.36□□□□□ -0.75
LINC00940-201ENST00000418006 ORMDL2Q53FV1 153 aa10.36□□□□□ -0.75
LINC00940-201ENST00000418006 LYRM7Q5U5X0 104 aa10.36□□□□□ -0.75
LINC00940-201ENST00000418006 SPANXN1Q5VSR9 72 aa10.36□□□□□ -0.75
LINC00940-201ENST00000418006 SBSPONQ8IVN8 264 aa10.36□□□□□ -0.75
LINC00940-201ENST00000418006 KIR2DL4Q99706 377 aa10.36□□□□□ -0.75
LINC00940-201ENST00000418006 AGPAT4-IT1Q9H0P7 198 aa10.36□□□□□ -0.75
LINC00940-201ENST00000418006 ESM1Q9NQ30 184 aa10.36□□□□□ -0.75
LINC00940-201ENST00000418006 RBAKDNA6NC62 111 aa10.36□□□□□ -0.75
LINC00940-201ENST00000418006 ELANEP08246 267 aa10.36□□□□□ -0.75
LINC00940-201ENST00000418006 NDUFA11Q86Y39 141 aa10.36□□□□□ -0.75
LINC00940-201ENST00000418006 BAALCQ8WXS3 180 aa10.36□□□□□ -0.75
LINC00940-201ENST00000418006 RASL10AQ92737 203 aa10.36□□□□□ -0.75
LINC00940-201ENST00000418006 IGHV4-4A0A075B6R2 117 aa10.35□□□□□ -0.75
LINC00940-201ENST00000418006 A8MWV9 139 aa10.35□□□□□ -0.75
LINC00940-201ENST00000418006 F6UB75 175 aa10.35□□□□□ -0.75
LINC00940-201ENST00000418006 ZFAND6Q6FIF0 208 aa10.35□□□□□ -0.75
LINC00940-201ENST00000418006 Q6ZQT7 251 aa10.35□□□□□ -0.75
LINC00940-201ENST00000418006 KLHL30-AS1Q8NEE0 82 aa10.35□□□□□ -0.75
LINC00940-201ENST00000418006 H3BVH4 76 aa10.34□□□□□ -0.75
LINC00940-201ENST00000418006 GAGE5Q13069 117 aa10.34□□□□□ -0.75
LINC00940-201ENST00000418006 GAGE6Q13070 117 aa10.34□□□□□ -0.75
LINC00940-201ENST00000418006 ANKRD29Q8N6D5 301 aa10.34□□□□□ -0.75
LINC00940-201ENST00000418006 TMEM89A2RUT3 159 aa10.34□□□□□ -0.75
LINC00940-201ENST00000418006 HOXD3P31249 432 aaPredicted RBP10.34□□□□□ -0.75
LINC00940-201ENST00000418006 TEX29Q8N6K0 151 aa10.34□□□□□ -0.75
LINC00940-201ENST00000418006 UBE2E2Q96LR5 201 aa10.34□□□□□ -0.75
LINC00940-201ENST00000418006 TRBV20-1A0A075B6N2 111 aa10.33□□□□□ -0.76
LINC00940-201ENST00000418006 SUMO2P61956 95 aaKnown RBP10.33□□□□□ -0.76
LINC00940-201ENST00000418006 Q6ZSV7 163 aa10.33□□□□□ -0.76
LINC00940-201ENST00000418006 SLURP1P55000 103 aa10.33□□□□□ -0.76
LINC00940-201ENST00000418006 CITED1Q99966 193 aa10.33□□□□□ -0.76
LINC00940-201ENST00000418006 NIPBLQ6KC79 2804 aaeCLIP10.32□□□□□ -0.76
LINC00940-201ENST00000418006 C2orf66Q6UXQ4 117 aa10.32□□□□□ -0.76
LINC00940-201ENST00000418006 HIVEP2P31629 2446 aa10.32□□□□□ -0.76
LINC00940-201ENST00000418006 A0A0J9YY99 117 aa10.32□□□□□ -0.76
LINC00940-201ENST00000418006 TMEM262E9PQX1 116 aa10.32□□□□□ -0.76
LINC00940-201ENST00000418006 Q8N2B8 174 aa10.32□□□□□ -0.76
LINC00940-201ENST00000418006 RPL39LQ96EH5 51 aaKnown RBP10.32□□□□□ -0.76
LINC00940-201ENST00000418006 A0A1W2PRX2 142 aa10.31□□□□□ -0.76
LINC00940-201ENST00000418006 B5MCH6 92 aa10.31□□□□□ -0.76
LINC00940-201ENST00000418006 K7EMT4 169 aa10.31□□□□□ -0.76
LINC00940-201ENST00000418006 SOCS3O14543 225 aa10.31□□□□□ -0.76
LINC00940-201ENST00000418006 NHLRC4P0CG21 123 aaPredicted RBP10.31□□□□□ -0.76
LINC00940-201ENST00000418006 CFC1BP0CG36 223 aa10.31□□□□□ -0.76
LINC00940-201ENST00000418006 CFC1P0CG37 223 aa10.31□□□□□ -0.76
LINC00940-201ENST00000418006 OR10J6PQ8NGY7 276 aa10.31□□□□□ -0.76
LINC00940-201ENST00000418006 SCGB1C2P0DMR2 95 aa10.3□□□□□ -0.76
LINC00940-201ENST00000418006 C9orf47Q6ZRZ4 202 aa10.3□□□□□ -0.76
LINC00940-201ENST00000418006 C10orf126Q8N4M7 172 aa10.3□□□□□ -0.76
LINC00940-201ENST00000418006 TMEM86BQ8N661 226 aa10.3□□□□□ -0.76
LINC00940-201ENST00000418006 MRPL53Q96EL3 112 aaKnown RBP10.3□□□□□ -0.76
LINC00940-201ENST00000418006 SORL1Q92673 2214 aa10.3□□□□□ -0.76
LINC00940-201ENST00000418006 C11orf86A6NJI1 115 aa10.29□□□□□ -0.76
LINC00940-201ENST00000418006 SPRY2O43597 315 aa10.29□□□□□ -0.76
LINC00940-201ENST00000418006 IGHV3-30P01768 117 aa10.29□□□□□ -0.76
LINC00940-201ENST00000418006 CRYGDP07320 174 aa10.29□□□□□ -0.76
LINC00940-201ENST00000418006 IGHV3-30-5P0DP03 117 aa10.29□□□□□ -0.76
LINC00940-201ENST00000418006 M0R381 172 aa10.29□□□□□ -0.76
LINC00940-201ENST00000418006 RNF152Q8N8N0 203 aa10.29□□□□□ -0.76
LINC00940-201ENST00000418006 WNK1Q9H4A3 2382 aa10.28□□□□□ -0.76
LINC00940-201ENST00000418006 RHODO00212 210 aa10.28□□□□□ -0.76
LINC00940-201ENST00000418006 PRR9Q5T870 116 aa10.28□□□□□ -0.76
LINC00940-201ENST00000418006 DCANP1Q8TF63 244 aa10.28□□□□□ -0.76
LINC00940-201ENST00000418006 IGLV4-69A0A075B6H9 119 aa10.28□□□□□ -0.76
LINC00940-201ENST00000418006 SLC25A20O43772 301 aa10.28□□□□□ -0.76
LINC00940-201ENST00000418006 IGKV3-20P01619 116 aa10.28□□□□□ -0.76
LINC00940-201ENST00000418006 EMP1P54849 157 aa10.28□□□□□ -0.76
LINC00940-201ENST00000418006 PRO1854Q9UHT4 67 aa10.28□□□□□ -0.76
LINC00940-201ENST00000418006 OVOL1O14753 267 aa10.27□□□□□ -0.77
LINC00940-201ENST00000418006 DUSP14O95147 198 aaKnown RBP10.27□□□□□ -0.77
LINC00940-201ENST00000418006 HERVK_113P61574 105 aa10.27□□□□□ -0.77
LINC00940-201ENST00000418006 C14orf178Q8N769 122 aaPredicted RBP10.27□□□□□ -0.77
LINC00940-201ENST00000418006 C9JAW5 83 aa10.26□□□□□ -0.77
LINC00940-201ENST00000418006 ID1P41134 155 aa10.26□□□□□ -0.77
LINC00940-201ENST00000418006 TSPEAR-AS2P59090 65 aa10.26□□□□□ -0.77
LINC00940-201ENST00000418006 GAGE2BQ13066 116 aa10.26□□□□□ -0.77
LINC00940-201ENST00000418006 ANXA2RQ3ZCQ2 193 aa10.26□□□□□ -0.77
LINC00940-201ENST00000418006 GAGE2EQ4V326 116 aa10.26□□□□□ -0.77
LINC00940-201ENST00000418006 SLC25A29Q8N8R3 303 aa10.26□□□□□ -0.77
LINC00940-201ENST00000418006 DPH3P1Q9H4G8 78 aa10.26□□□□□ -0.77
LINC00940-201ENST00000418006 GAGE2DQ9UEU5 116 aa10.26□□□□□ -0.77
LINC00940-201ENST00000418006 LY6G6DO95868 133 aa10.26□□□□□ -0.77
LINC00940-201ENST00000418006 TSHBP01222 138 aa10.26□□□□□ -0.77
LINC00940-201ENST00000418006 RNASE4P34096 147 aaKnown RBP10.26□□□□□ -0.77
LINC00940-201ENST00000418006 NDUFV3P56181 108 aaKnown RBP10.26□□□□□ -0.77
LINC00940-201ENST00000418006 LINC00477Q96M19 166 aa10.26□□□□□ -0.77
LINC00940-201ENST00000418006 TRAV4A0A0B4J268 109 aa10.25□□□□□ -0.77
LINC00940-201ENST00000418006 MGPP08493 103 aa10.25□□□□□ -0.77
LINC00940-201ENST00000418006 CD28P10747 220 aa10.25□□□□□ -0.77
LINC00940-201ENST00000418006 ASIPP42127 132 aa10.25□□□□□ -0.77
LINC00940-201ENST00000418006 TRPT1Q86TN4 253 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms