RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 AMN1Q8IY45 258 aa5.95□□□□□ -1.46
TRIM48-201ENST00000417545 MRAP2Q96G30 205 aa5.95□□□□□ -1.46
TRIM48-201ENST00000417545 A0A096LPF7 62 aa5.94□□□□□ -1.46
TRIM48-201ENST00000417545 TGIF2-C20orf24A0A0A6YYL0 155 aa5.94□□□□□ -1.46
TRIM48-201ENST00000417545 TRAV26-2A0A0B4J265 109 aa5.94□□□□□ -1.46
TRIM48-201ENST00000417545 TRBV10-1A0A0K0K1A3 114 aa5.94□□□□□ -1.46
TRIM48-201ENST00000417545 A0A1B0GXF2 115 aa5.94□□□□□ -1.46
TRIM48-201ENST00000417545 H3BNG1 76 aa5.94□□□□□ -1.46
TRIM48-201ENST00000417545 MT-ND6P03923 174 aa5.94□□□□□ -1.46
TRIM48-201ENST00000417545 OR10J3Q5JRS4 329 aa5.94□□□□□ -1.46
TRIM48-201ENST00000417545 FAM104BQ5XKR9 115 aa5.94□□□□□ -1.46
TRIM48-201ENST00000417545 ZNRF2Q8NHG8 242 aa5.94□□□□□ -1.46
TRIM48-201ENST00000417545 LOC100131303A0A0U1RQF7 123 aa5.93□□□□□ -1.46
TRIM48-201ENST00000417545 NCR2O95944 276 aa5.93□□□□□ -1.46
TRIM48-201ENST00000417545 PPP1R17O96001 155 aa5.93□□□□□ -1.46
TRIM48-201ENST00000417545 RAB4AP20338 218 aa5.93□□□□□ -1.46
TRIM48-201ENST00000417545 ELOBQ15370 118 aa5.93□□□□□ -1.46
TRIM48-201ENST00000417545 UFSP1Q6NVU6 142 aa5.93□□□□□ -1.46
TRIM48-201ENST00000417545 NEGR1Q7Z3B1 354 aa5.93□□□□□ -1.46
TRIM48-201ENST00000417545 DNAJC30Q96LL9 226 aa5.93□□□□□ -1.46
TRIM48-201ENST00000417545 KIF25-AS1Q9Y6Z4 181 aa5.93□□□□□ -1.46
TRIM48-201ENST00000417545 D6R8Y8 96 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 APCSP02743 223 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 P0DMU3 169 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 FAM231AP0DMU4 169 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 FAM231CP0DMU5 169 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 CCL18P55774 89 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 FABP9Q0Z7S8 132 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 MRPL51Q4U2R6 128 aaKnown RBP5.92□□□□□ -1.46
TRIM48-201ENST00000417545 CASC10Q5T4H9 136 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 Q6ZSN1 163 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 ORMDL3Q8N138 153 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 ATP6V0E2Q8NHE4 81 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 VSIG2Q96IQ7 327 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 GNB1LQ9BYB4 327 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 ST20Q9HBF5 79 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 NIT2Q9NQR4 276 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 TRAPPC1Q9Y5R8 145 aa5.92□□□□□ -1.46
TRIM48-201ENST00000417545 TRBV7-3A0A075B6L6 115 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 TRBV24-1A0A075B6N3 115 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 SMKR1H3BMG3 65 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 M0QY20 66 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 SCO1O75880 301 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 PPBPP02775 128 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 RPS10P46783 165 aaKnown RBP5.91□□□□□ -1.46
TRIM48-201ENST00000417545 TMEM136Q6ZRR5 245 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 GATD1Q8NB37 220 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 NEXN-AS1Q8NBZ9 246 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 RPL39LQ96EH5 51 aaKnown RBP5.91□□□□□ -1.46
TRIM48-201ENST00000417545 PRELID3AQ96N28 172 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 MRPL18Q9H0U6 180 aaKnown RBP5.91□□□□□ -1.46
TRIM48-201ENST00000417545 EREGO14944 169 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 PMCHP20382 165 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 LINC00315P59091 139 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 RNF185Q96GF1 192 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 APLNQ9ULZ1 77 aa5.91□□□□□ -1.46
TRIM48-201ENST00000417545 IGHV3-38A0A0C4DH36 116 aa5.9□□□□□ -1.47
TRIM48-201ENST00000417545 FCER1GP30273 86 aa5.9□□□□□ -1.47
TRIM48-201ENST00000417545 COTL1Q14019 142 aa5.9□□□□□ -1.47
TRIM48-201ENST00000417545 KIAA1644Q3SXP7 199 aa5.9□□□□□ -1.47
TRIM48-201ENST00000417545 TMEM97Q5BJF2 176 aa5.9□□□□□ -1.47
TRIM48-201ENST00000417545 DAZ4Q86SG3 579 aaKnown RBP5.9□□□□□ -1.47
TRIM48-201ENST00000417545 KRTAP4-12Q9BQ66 201 aa5.9□□□□□ -1.47
TRIM48-201ENST00000417545 GTSF1LQ9H1H1 148 aa5.9□□□□□ -1.47
TRIM48-201ENST00000417545 MAP1LC3AQ9H492 121 aa5.9□□□□□ -1.47
TRIM48-201ENST00000417545 DAZ3Q9NR90 486 aaKnown RBP5.9□□□□□ -1.47
TRIM48-201ENST00000417545 TGP01266 2768 aa5.89□□□□□ -1.47
TRIM48-201ENST00000417545 TRAV8-6A0A0B4J262 113 aa5.89□□□□□ -1.47
TRIM48-201ENST00000417545 SDHAF1A6NFY7 115 aa5.89□□□□□ -1.47
TRIM48-201ENST00000417545 TNFRSF6BO95407 300 aa5.89□□□□□ -1.47
TRIM48-201ENST00000417545 UBE2D3P61077 147 aa5.89□□□□□ -1.47
TRIM48-201ENST00000417545 UBE2D2P62837 147 aa5.89□□□□□ -1.47
TRIM48-201ENST00000417545 KIR2DL4Q99706 377 aa5.89□□□□□ -1.47
TRIM48-201ENST00000417545 LAMTOR2Q9Y2Q5 125 aa5.89□□□□□ -1.47
TRIM48-201ENST00000417545 STAB2Q8WWQ8 2551 aa5.88□□□□□ -1.47
TRIM48-201ENST00000417545 LOC389332A0A1B0GUA5 103 aa5.88□□□□□ -1.47
TRIM48-201ENST00000417545 I3L3M4 83 aa5.88□□□□□ -1.47
TRIM48-201ENST00000417545 PHOX2AO14813 284 aa5.88□□□□□ -1.47
TRIM48-201ENST00000417545 UBE2L6O14933 153 aa5.88□□□□□ -1.47
TRIM48-201ENST00000417545 LY6G6CO95867 125 aa5.88□□□□□ -1.47
TRIM48-201ENST00000417545 RAB5AP20339 215 aa5.88□□□□□ -1.47
TRIM48-201ENST00000417545 SUMO2P61956 95 aaKnown RBP5.88□□□□□ -1.47
TRIM48-201ENST00000417545 TNP2Q05952 138 aa5.88□□□□□ -1.47
TRIM48-201ENST00000417545 C20orf78Q9BR46 151 aa5.88□□□□□ -1.47
TRIM48-201ENST00000417545 DNAH7Q8WXX0 4024 aa5.87□□□□□ -1.47
TRIM48-201ENST00000417545 TRBV25-1A0A075B6N4 114 aa5.87□□□□□ -1.47
TRIM48-201ENST00000417545 IGHV1-24A0A0C4DH33 117 aa5.87□□□□□ -1.47
TRIM48-201ENST00000417545 TRBV6-5A0A0K0K1A5 114 aa5.87□□□□□ -1.47
TRIM48-201ENST00000417545 VCYO14598 125 aa5.87□□□□□ -1.47
TRIM48-201ENST00000417545 TCAPO15273 167 aa5.87□□□□□ -1.47
TRIM48-201ENST00000417545 NPYP01303 97 aa5.87□□□□□ -1.47
TRIM48-201ENST00000417545 AMTP48728 403 aa5.87□□□□□ -1.47
TRIM48-201ENST00000417545 LYPD5Q6UWN5 251 aa5.87□□□□□ -1.47
TRIM48-201ENST00000417545 YPEL4Q96NS1 127 aa5.87□□□□□ -1.47
TRIM48-201ENST00000417545 CHCHD5Q9BSY4 110 aa5.87□□□□□ -1.47
TRIM48-201ENST00000417545 Q9UF83 564 aa5.87□□□□□ -1.47
TRIM48-201ENST00000417545 GAS8-AS1O95177 125 aa5.86□□□□□ -1.47
TRIM48-201ENST00000417545 LINC00694P0DN24 101 aa5.86□□□□□ -1.47
TRIM48-201ENST00000417545 PKIAP61925 76 aa5.86□□□□□ -1.47
TRIM48-201ENST00000417545 ESRGQ1W209 222 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms