RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 URB1-AS1Q96HZ7 61 aa8.48□□□□□ -1.05
GABRE-202ENST00000417300 MAP1LC3AQ9H492 121 aa8.48□□□□□ -1.05
GABRE-202ENST00000417300 TRAV4A0A0B4J268 109 aa8.47□□□□□ -1.05
GABRE-202ENST00000417300 NUPR1O60356 82 aa8.47□□□□□ -1.05
GABRE-202ENST00000417300 LINC00612Q8N6U2 182 aa8.47□□□□□ -1.05
GABRE-202ENST00000417300 CHCHD1Q96BP2 118 aaKnown RBP8.47□□□□□ -1.05
GABRE-202ENST00000417300 IFITM10A6NMD0 228 aa8.46□□□□□ -1.06
GABRE-202ENST00000417300 F5H697 171 aa8.46□□□□□ -1.06
GABRE-202ENST00000417300 H7C1H1 209 aa8.46□□□□□ -1.06
GABRE-202ENST00000417300 M0QY20 66 aa8.46□□□□□ -1.06
GABRE-202ENST00000417300 CIDEAO60543 219 aa8.46□□□□□ -1.06
GABRE-202ENST00000417300 S100A2P29034 98 aa8.46□□□□□ -1.06
GABRE-202ENST00000417300 NIT1Q86X76 327 aa8.46□□□□□ -1.06
GABRE-202ENST00000417300 Q8NAQ8 132 aa8.46□□□□□ -1.06
GABRE-202ENST00000417300 PACRGQ96M98 296 aaPredicted RBP8.46□□□□□ -1.06
GABRE-202ENST00000417300 C18orf15Q96N68 181 aa8.46□□□□□ -1.06
GABRE-202ENST00000417300 C20orf78Q9BR46 151 aa8.46□□□□□ -1.06
GABRE-202ENST00000417300 IGHV4-28A0A0C4DH34 117 aa8.45□□□□□ -1.06
GABRE-202ENST00000417300 TRBV6-5A0A0K0K1A5 114 aa8.45□□□□□ -1.06
GABRE-202ENST00000417300 LINC01546A6NGU7 62 aa8.45□□□□□ -1.06
GABRE-202ENST00000417300 LYRM9A8MSI8 78 aa8.45□□□□□ -1.06
GABRE-202ENST00000417300 LINC00614P0C842 121 aa8.45□□□□□ -1.06
GABRE-202ENST00000417300 IFI27P40305 119 aaPredicted RBP8.45□□□□□ -1.06
GABRE-202ENST00000417300 SUMO2P61956 95 aaKnown RBP8.45□□□□□ -1.06
GABRE-202ENST00000417300 RPL32P62910 135 aaKnown RBP8.45□□□□□ -1.06
GABRE-202ENST00000417300 PDZD11Q5EBL8 140 aa8.45□□□□□ -1.06
GABRE-202ENST00000417300 RNASEKQ6P5S7 137 aaKnown RBP8.45□□□□□ -1.06
GABRE-202ENST00000417300 FA2HQ7L5A8 372 aa8.45□□□□□ -1.06
GABRE-202ENST00000417300 OR4C5Q8NGB2 326 aa8.45□□□□□ -1.06
GABRE-202ENST00000417300 PRSS3P2Q8NHM4 247 aa8.45□□□□□ -1.06
GABRE-202ENST00000417300 TMEM18Q96B42 140 aa8.45□□□□□ -1.06
GABRE-202ENST00000417300 RPL39LQ96EH5 51 aaKnown RBP8.45□□□□□ -1.06
GABRE-202ENST00000417300 HIST1H2BLQ99880 126 aa8.45□□□□□ -1.06
GABRE-202ENST00000417300 NXT2Q9NPJ8 142 aaKnown RBP8.45□□□□□ -1.06
GABRE-202ENST00000417300 IGLV2-18A0A075B6J9 118 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 LOC389332A0A1B0GUA5 103 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 GAGE12BA1L429 117 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 HSBP1O75506 76 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 GAGE7O76087 117 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 IGHV3-53P01767 116 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 GAGE12FP0CL80 117 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 GAGE12GP0CL81 117 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 GAGE12IP0CL82 117 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 PMCHP20382 165 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 Q8N8P6 123 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 AP5S1Q9NUS5 200 aa8.44□□□□□ -1.06
GABRE-202ENST00000417300 UBR4Q5T4S7 5183 aa8.43□□□□□ -1.06
GABRE-202ENST00000417300 TRGV2A0A075B6R0 118 aa8.43□□□□□ -1.06
GABRE-202ENST00000417300 IGHV3-73A0A0B4J1V6 119 aa8.43□□□□□ -1.06
GABRE-202ENST00000417300 AMTP48728 403 aa8.43□□□□□ -1.06
GABRE-202ENST00000417300 EMP1P54849 157 aa8.43□□□□□ -1.06
GABRE-202ENST00000417300 ZNF479Q96JC4 524 aa8.43□□□□□ -1.06
GABRE-202ENST00000417300 NIT2Q9NQR4 276 aa8.43□□□□□ -1.06
GABRE-202ENST00000417300 K7EMI3 77 aa8.42□□□□□ -1.06
GABRE-202ENST00000417300 FABP4P15090 132 aa8.42□□□□□ -1.06
GABRE-202ENST00000417300 POLR2KP53803 58 aaKnown RBP8.42□□□□□ -1.06
GABRE-202ENST00000417300 FAM222AQ5U5X8 452 aa8.42□□□□□ -1.06
GABRE-202ENST00000417300 ST20Q9HBF5 79 aa8.42□□□□□ -1.06
GABRE-202ENST00000417300 DKK2Q9UBU2 259 aa8.42□□□□□ -1.06
GABRE-202ENST00000417300 TEX48A0A1B0GUV7 120 aa8.41□□□□□ -1.06
GABRE-202ENST00000417300 Q6ZSN1 163 aa8.41□□□□□ -1.06
GABRE-202ENST00000417300 DNAJC30Q96LL9 226 aa8.41□□□□□ -1.06
GABRE-202ENST00000417300 TMEM70Q9BUB7 260 aa8.41□□□□□ -1.06
GABRE-202ENST00000417300 HERC1Q15751 4861 aa8.41□□□□□ -1.06
GABRE-202ENST00000417300 IGHV1-24A0A0C4DH33 117 aa8.4□□□□□ -1.06
GABRE-202ENST00000417300 TRBV10-1A0A0K0K1A3 114 aa8.4□□□□□ -1.06
GABRE-202ENST00000417300 TRBV27A0A0K0K1C4 114 aa8.4□□□□□ -1.06
GABRE-202ENST00000417300 SDHAF1A6NFY7 115 aa8.4□□□□□ -1.06
GABRE-202ENST00000417300 K7EQD1 137 aa8.4□□□□□ -1.06
GABRE-202ENST00000417300 FAM19A2Q8N3H0 131 aa8.4□□□□□ -1.06
GABRE-202ENST00000417300 NEXN-AS1Q8NBZ9 246 aa8.4□□□□□ -1.06
GABRE-202ENST00000417300 C11orf68Q9H3H3 251 aaKnown RBP8.4□□□□□ -1.06
GABRE-202ENST00000417300 RETNQ9HD89 108 aa8.4□□□□□ -1.06
GABRE-202ENST00000417300 A0A096LNJ9 63 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 TRBV6-4A0A1B0GX49 114 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 VCYO14598 125 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 DEFB4AO15263 64 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 SPART-AS1P0CW21 52 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 DEFB130BP0DP73 79 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 DEFB130AP0DP74 79 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 AKR1D1P51857 326 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 SBSPONQ8IVN8 264 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 OR10D4PQ8NGN7 298 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 TM2D3Q9BRN9 247 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 ALMS1Q8TCU4 4167 aa8.39□□□□□ -1.07
GABRE-202ENST00000417300 HBDP02042 147 aa8.38□□□□□ -1.07
GABRE-202ENST00000417300 P0DMU3 169 aa8.38□□□□□ -1.07
GABRE-202ENST00000417300 FAM231AP0DMU4 169 aa8.38□□□□□ -1.07
GABRE-202ENST00000417300 FAM231CP0DMU5 169 aa8.38□□□□□ -1.07
GABRE-202ENST00000417300 FHL2Q14192 279 aa8.38□□□□□ -1.07
GABRE-202ENST00000417300 LAGE3Q14657 143 aa8.38□□□□□ -1.07
GABRE-202ENST00000417300 PMCHL1Q16048 86 aa8.38□□□□□ -1.07
GABRE-202ENST00000417300 ORMDL2Q53FV1 153 aa8.38□□□□□ -1.07
GABRE-202ENST00000417300 CELA1Q9UNI1 258 aa8.38□□□□□ -1.07
GABRE-202ENST00000417300 TNFRSF18Q9Y5U5 241 aa8.38□□□□□ -1.07
GABRE-202ENST00000417300 DNAH10Q8IVF4 4471 aa8.37□□□□□ -1.07
GABRE-202ENST00000417300 TRGV4A0A0C4DH28 118 aa8.37□□□□□ -1.07
GABRE-202ENST00000417300 TCAPO15273 167 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms