RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 SMIM20Q8N5G0 67 aa14.2□□□□□ -0.14
SHANK3-202ENST00000414786 C3orf84H3BNL1 204 aa14.2□□□□□ -0.14
SHANK3-202ENST00000414786 A0A0G2JMZ2 1700 aa14.2□□□□□ -0.14
SHANK3-202ENST00000414786 LRRC37A2A6NM11 1700 aa14.2□□□□□ -0.14
SHANK3-202ENST00000414786 UBE2D2P62837 147 aa14.2□□□□□ -0.14
SHANK3-202ENST00000414786 COL24A1Q17RW2 1714 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 BPY2O14599 106 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 TMEM190Q8WZ59 177 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 MYCNOSP40205 109 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 C20orf144Q9BQM9 153 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 COL5A3P25940 1745 aaPredicted RBP14.19□□□□□ -0.14
SHANK3-202ENST00000414786 KIR2DL5BQ8NHK3 375 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 FREM1Q5H8C1 2179 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 RPL37AP8A6NKH3 93 aa14.18□□□□□ -0.14
SHANK3-202ENST00000414786 REG3AQ06141 175 aa14.18□□□□□ -0.14
SHANK3-202ENST00000414786 KIAA1671Q9BY89 1806 aa14.18□□□□□ -0.14
SHANK3-202ENST00000414786 C1orf158Q8N1D5 194 aa14.18□□□□□ -0.14
SHANK3-202ENST00000414786 UPK3BQ9BT76 320 aa14.18□□□□□ -0.14
SHANK3-202ENST00000414786 C14orf177Q52M58 125 aa14.18□□□□□ -0.14
SHANK3-202ENST00000414786 LINC00311Q8N616 119 aa14.17□□□□□ -0.14
SHANK3-202ENST00000414786 UNQ9165/PRO28630Q6UXU0 137 aa14.17□□□□□ -0.14
SHANK3-202ENST00000414786 FAM236DA0A1B0GTK5 79 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 FAM236CP0DP71 79 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 Q6ZUT4 128 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 LINC01620Q4KN68 170 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 C16orf54Q6UWD8 224 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 NFE4Q86UQ8 179 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 H0YGX0 51 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 Q6ZTI0 123 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 NCOA6Q14686 2063 aaPredicted RBP14.16□□□□□ -0.14
SHANK3-202ENST00000414786 IGLV1-44P01699 117 aa14.15□□□□□ -0.14
SHANK3-202ENST00000414786 PRO0255Q9UI72 69 aa14.15□□□□□ -0.14
SHANK3-202ENST00000414786 MALRD1Q5VYJ5 2156 aa14.15□□□□□ -0.14
SHANK3-202ENST00000414786 ADAMTS9Q9P2N4 1935 aa14.15□□□□□ -0.14
SHANK3-202ENST00000414786 IGLV2-8P01709 118 aa14.14□□□□□ -0.15
SHANK3-202ENST00000414786 PLA2G2CQ5R387 149 aa14.14□□□□□ -0.15
SHANK3-202ENST00000414786 ZNF524Q96C55 264 aa14.14□□□□□ -0.15
SHANK3-202ENST00000414786 WFDC13Q8IUB5 93 aa14.14□□□□□ -0.15
SHANK3-202ENST00000414786 MAP6D1Q9H9H5 199 aa14.13□□□□□ -0.15
SHANK3-202ENST00000414786 VWA8A3KMH1 1905 aa14.13□□□□□ -0.15
SHANK3-202ENST00000414786 POM121L12Q8N7R1 296 aa14.12□□□□□ -0.15
SHANK3-202ENST00000414786 ZNF747Q9BV97 191 aa14.12□□□□□ -0.15
SHANK3-202ENST00000414786 THSD7AQ9UPZ6 1657 aa14.12□□□□□ -0.15
SHANK3-202ENST00000414786 MUC4Q99102 2169 aa14.11□□□□□ -0.15
SHANK3-202ENST00000414786 SDIM1Q6ZPB5 146 aa14.11□□□□□ -0.15
SHANK3-202ENST00000414786 TMEM256-PLSCR3K7ERE1 68 aa14.11□□□□□ -0.15
SHANK3-202ENST00000414786 Q6ZS49 121 aa14.11□□□□□ -0.15
SHANK3-202ENST00000414786 FOXL2NBQ6ZUU3 175 aa14.11□□□□□ -0.15
SHANK3-202ENST00000414786 CHCHD10Q8WYQ3 142 aaPredicted RBP14.11□□□□□ -0.15
SHANK3-202ENST00000414786 NRXN2Q9P2S2 1712 aa14.11□□□□□ -0.15
SHANK3-202ENST00000414786 CDPF1Q6NVV7 123 aa14.1□□□□□ -0.15
SHANK3-202ENST00000414786 IGLV2-11P01706 119 aa14.1□□□□□ -0.15
SHANK3-202ENST00000414786 PLA2G1BP04054 148 aaKnown RBP14.1□□□□□ -0.15
SHANK3-202ENST00000414786 SERP1Q9Y6X1 66 aa14.1□□□□□ -0.15
SHANK3-202ENST00000414786 K7EIM0 57 aa14.1□□□□□ -0.15
SHANK3-202ENST00000414786 KIAA1549Q9HCM3 1950 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 WFDC2Q14508 124 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 PTH2Q96A98 100 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 I3L2K1 104 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 CREBBPQ92793 2442 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 SORL1Q92673 2214 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 CIRBP-AS1Q8TBR5 109 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 SLX1AQ9BQ83 275 aa14.08□□□□□ -0.15
SHANK3-202ENST00000414786 LOXL1Q08397 574 aaPredicted RBP14.08□□□□□ -0.16
SHANK3-202ENST00000414786 Q6ZVQ6 151 aa14.08□□□□□ -0.16
SHANK3-202ENST00000414786 OBSL1O75147 1896 aa14.08□□□□□ -0.16
SHANK3-202ENST00000414786 TRBV6-1A0A0K0K1D8 114 aa14.08□□□□□ -0.16
SHANK3-202ENST00000414786 ATOX1O00244 68 aa14.08□□□□□ -0.16
SHANK3-202ENST00000414786 FNDC1Q4ZHG4 1894 aaPredicted RBP14.07□□□□□ -0.16
SHANK3-202ENST00000414786 WDR90Q96KV7 1748 aa14.07□□□□□ -0.16
SHANK3-202ENST00000414786 RNF152Q8N8N0 203 aa14.07□□□□□ -0.16
SHANK3-202ENST00000414786 MED14OSP0DP75 135 aa14.07□□□□□ -0.16
SHANK3-202ENST00000414786 LY6G6DO95868 133 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 LINC01548A6NM66 108 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 TEN1Q86WV5 123 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 ZFAND3Q9H8U3 227 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 PRR14LQ5THK1 2151 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 TRBV10-1A0A0K0K1A3 114 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 IGLV11-55A0A075B6I3 123 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 C19orf84I3L1E1 186 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 C22orf34Q6ZV56 151 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 NDUFA11Q86Y39 141 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 LY6LH3BQJ8 138 aa14.05□□□□□ -0.16
SHANK3-202ENST00000414786 FXYD2P54710 66 aa14.05□□□□□ -0.16
SHANK3-202ENST00000414786 PIP4P1Q86T03 277 aa14.05□□□□□ -0.16
SHANK3-202ENST00000414786 SPINK1P00995 79 aa14.05□□□□□ -0.16
SHANK3-202ENST00000414786 ENHOQ6UWT2 76 aa14.05□□□□□ -0.16
SHANK3-202ENST00000414786 PRR15LQ9BU68 103 aa14.05□□□□□ -0.16
SHANK3-202ENST00000414786 ZFAND2AQ8N6M9 145 aa14.04□□□□□ -0.16
SHANK3-202ENST00000414786 C11orf86A6NJI1 115 aa14.04□□□□□ -0.16
SHANK3-202ENST00000414786 WFDC10AQ9H1F0 79 aa14.04□□□□□ -0.16
SHANK3-202ENST00000414786 KAAG1Q9UBP8 84 aa14.04□□□□□ -0.16
SHANK3-202ENST00000414786 JMJD7-PLA2G4BH0Y9G9 81 aa14.03□□□□□ -0.16
SHANK3-202ENST00000414786 CXCL5P42830 114 aa14.03□□□□□ -0.16
SHANK3-202ENST00000414786 C11orf53Q8IXP5 236 aa14.03□□□□□ -0.16
SHANK3-202ENST00000414786 NANOS2P60321 138 aaKnown RBP14.03□□□□□ -0.16
SHANK3-202ENST00000414786 PIK3CD-AS1Q5SR53 167 aa14.02□□□□□ -0.16
SHANK3-202ENST00000414786 FAM30AQ9NZY2 134 aa14.02□□□□□ -0.16
SHANK3-202ENST00000414786 SNURFQ9Y675 71 aa14.02□□□□□ -0.16
SHANK3-202ENST00000414786 KIR2DL5BA0A0G2JN68 375 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms