RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MPV17L2Q567V2 206 aa10.78□□□□□ -0.68
MRPL55-220ENST00000411464 FMC1Q96HJ9 113 aa10.78□□□□□ -0.68
MRPL55-220ENST00000411464 CHCHD5Q9BSY4 110 aa10.78□□□□□ -0.68
MRPL55-220ENST00000411464 RAB4BP61018 213 aa10.77□□□□□ -0.69
MRPL55-220ENST00000411464 ZNF674Q2M3X9 581 aa10.77□□□□□ -0.69
MRPL55-220ENST00000411464 EIF5AL1Q6IS14 154 aaKnown RBP10.77□□□□□ -0.69
MRPL55-220ENST00000411464 C9orf163Q8N9P6 203 aa10.77□□□□□ -0.69
MRPL55-220ENST00000411464 FAT3Q8TDW7 4589 aa10.76□□□□□ -0.69
MRPL55-220ENST00000411464 ZNF56Q15929 161 aa10.76□□□□□ -0.69
MRPL55-220ENST00000411464 NEXN-AS1Q8NBZ9 246 aa10.76□□□□□ -0.69
MRPL55-220ENST00000411464 UMAD1C9J7I0 102 aa10.75□□□□□ -0.69
MRPL55-220ENST00000411464 FHITP49789 147 aa10.75□□□□□ -0.69
MRPL55-220ENST00000411464 ALKAL2Q6UX46 152 aa10.75□□□□□ -0.69
MRPL55-220ENST00000411464 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.75□□□□□ -0.69
MRPL55-220ENST00000411464 LTAP01374 205 aa10.74□□□□□ -0.69
MRPL55-220ENST00000411464 SULT1A2P50226 295 aa10.74□□□□□ -0.69
MRPL55-220ENST00000411464 RPL19P84098 196 aaKnown RBP10.74□□□□□ -0.69
MRPL55-220ENST00000411464 FAM213BQ8TBF2 198 aa10.74□□□□□ -0.69
MRPL55-220ENST00000411464 TRBV6-1A0A0K0K1D8 114 aa10.73□□□□□ -0.69
MRPL55-220ENST00000411464 TMEM97Q5BJF2 176 aa10.73□□□□□ -0.69
MRPL55-220ENST00000411464 PRR27Q6MZM9 219 aa10.73□□□□□ -0.69
MRPL55-220ENST00000411464 SDIM1Q6ZPB5 146 aa10.73□□□□□ -0.69
MRPL55-220ENST00000411464 TCEAL7Q9BRU2 100 aa10.73□□□□□ -0.69
MRPL55-220ENST00000411464 F5H697 171 aa10.72□□□□□ -0.69
MRPL55-220ENST00000411464 RAB5CP51148 216 aa10.72□□□□□ -0.69
MRPL55-220ENST00000411464 CST9LP1Q5W188 147 aa10.72□□□□□ -0.69
MRPL55-220ENST00000411464 Q6ZRU5 148 aa10.72□□□□□ -0.69
MRPL55-220ENST00000411464 LINC00269Q8N2A0 174 aa10.72□□□□□ -0.69
MRPL55-220ENST00000411464 CLRN3Q8NCR9 226 aa10.72□□□□□ -0.69
MRPL55-220ENST00000411464 DPH3Q96FX2 82 aa10.72□□□□□ -0.69
MRPL55-220ENST00000411464 PRR34Q9NV39 138 aa10.72□□□□□ -0.69
MRPL55-220ENST00000411464 MAP1LC3B2A6NCE7 125 aa10.71□□□□□ -0.69
MRPL55-220ENST00000411464 PANO1I0J062 215 aa10.71□□□□□ -0.69
MRPL55-220ENST00000411464 MT1HL1P0DM35 61 aa10.71□□□□□ -0.69
MRPL55-220ENST00000411464 RBX1P62877 108 aa10.71□□□□□ -0.69
MRPL55-220ENST00000411464 CLPSL2Q6UWE3 100 aa10.71□□□□□ -0.69
MRPL55-220ENST00000411464 NTM-AS1Q6ZSK4 140 aa10.71□□□□□ -0.69
MRPL55-220ENST00000411464 OR10AG1Q8NH19 301 aa10.71□□□□□ -0.69
MRPL55-220ENST00000411464 MAP1LC3BQ9GZQ8 125 aa10.71□□□□□ -0.69
MRPL55-220ENST00000411464 AKR1C3P42330 323 aa10.7□□□□□ -0.7
MRPL55-220ENST00000411464 GAGE6Q13070 117 aa10.7□□□□□ -0.7
MRPL55-220ENST00000411464 SPANXN1Q5VSR9 72 aa10.7□□□□□ -0.7
MRPL55-220ENST00000411464 TEX261Q6UWH6 196 aa10.7□□□□□ -0.7
MRPL55-220ENST00000411464 MBD3L1Q8WWY6 194 aa10.7□□□□□ -0.7
MRPL55-220ENST00000411464 DERL1Q9BUN8 251 aa10.7□□□□□ -0.7
MRPL55-220ENST00000411464 TRBV25-1A0A075B6N4 114 aa10.69□□□□□ -0.7
MRPL55-220ENST00000411464 A0A1B0GV50 99 aa10.69□□□□□ -0.7
MRPL55-220ENST00000411464 H2AFB1P0C5Y9 115 aa10.69□□□□□ -0.7
MRPL55-220ENST00000411464 KRTAP26-1Q6PEX3 210 aa10.69□□□□□ -0.7
MRPL55-220ENST00000411464 SFT2D1Q8WV19 159 aa10.69□□□□□ -0.7
MRPL55-220ENST00000411464 VAX2Q9UIW0 290 aa10.69□□□□□ -0.7
MRPL55-220ENST00000411464 MUC21A0A0G2JKD1 596 aa10.68□□□□□ -0.7
MRPL55-220ENST00000411464 MUC21A0A140T8X8 626 aa10.68□□□□□ -0.7
MRPL55-220ENST00000411464 CXCL1P09341 107 aa10.68□□□□□ -0.7
MRPL55-220ENST00000411464 SMIM17P0DL12 118 aa10.68□□□□□ -0.7
MRPL55-220ENST00000411464 SSTP61278 116 aa10.68□□□□□ -0.7
MRPL55-220ENST00000411464 hDV102S1A0JD36 115 aa10.67□□□□□ -0.7
MRPL55-220ENST00000411464 S100A9P06702 114 aaKnown RBP10.67□□□□□ -0.7
MRPL55-220ENST00000411464 CNBPP62633 177 aaKnown RBP10.67□□□□□ -0.7
MRPL55-220ENST00000411464 SSBP4Q9BWG4 385 aaPredicted RBP10.67□□□□□ -0.7
MRPL55-220ENST00000411464 IGLV10-54A0A075B6I4 117 aa10.66□□□□□ -0.7
MRPL55-220ENST00000411464 IGHV3-64A0A075B6Q5 118 aa10.66□□□□□ -0.7
MRPL55-220ENST00000411464 SNAI2O43623 268 aa10.66□□□□□ -0.7
MRPL55-220ENST00000411464 OR5AL1P0C617 328 aa10.66□□□□□ -0.7
MRPL55-220ENST00000411464 REG3AQ06141 175 aa10.66□□□□□ -0.7
MRPL55-220ENST00000411464 CIRBPQ14011 172 aaKnown RBP10.66□□□□□ -0.7
MRPL55-220ENST00000411464 AP5S1Q9NUS5 200 aa10.66□□□□□ -0.7
MRPL55-220ENST00000411464 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.65□□□□□ -0.7
MRPL55-220ENST00000411464 TRAV8-4A0A0B4J246 113 aa10.65□□□□□ -0.7
MRPL55-220ENST00000411464 IGHV1-24A0A0C4DH33 117 aa10.65□□□□□ -0.7
MRPL55-220ENST00000411464 PAGE4O60829 102 aa10.65□□□□□ -0.7
MRPL55-220ENST00000411464 P01737 135 aa10.65□□□□□ -0.7
MRPL55-220ENST00000411464 BLOC1S1P78537 153 aa10.65□□□□□ -0.7
MRPL55-220ENST00000411464 IQCJQ1A5X6 159 aa10.65□□□□□ -0.7
MRPL55-220ENST00000411464 BAGE2Q86Y30 109 aa10.65□□□□□ -0.7
MRPL55-220ENST00000411464 RNF185Q96GF1 192 aa10.65□□□□□ -0.7
MRPL55-220ENST00000411464 DPH3P1Q9H4G8 78 aa10.65□□□□□ -0.7
MRPL55-220ENST00000411464 TRAV1-1A0A0B4J248 108 aa10.64□□□□□ -0.71
MRPL55-220ENST00000411464 CCL20P78556 96 aa10.64□□□□□ -0.71
MRPL55-220ENST00000411464 IFITM2Q01629 132 aa10.64□□□□□ -0.71
MRPL55-220ENST00000411464 AP1S3Q96PC3 154 aa10.64□□□□□ -0.71
MRPL55-220ENST00000411464 A0A087WYN8 130 aa10.63□□□□□ -0.71
MRPL55-220ENST00000411464 TEX46H3BTG2 121 aa10.63□□□□□ -0.71
MRPL55-220ENST00000411464 KIF25-AS1Q9Y6Z4 181 aa10.63□□□□□ -0.71
MRPL55-220ENST00000411464 MLST8Q9BVC4 326 aa10.62□□□□□ -0.71
MRPL55-220ENST00000411464 PKHD1L1Q86WI1 4243 aa10.62□□□□□ -0.71
MRPL55-220ENST00000411464 H7C1H1 209 aa10.61□□□□□ -0.71
MRPL55-220ENST00000411464 CHTF8P0CG12 524 aa10.61□□□□□ -0.71
MRPL55-220ENST00000411464 GZMBP10144 247 aa10.61□□□□□ -0.71
MRPL55-220ENST00000411464 C20orf203Q8NBC4 194 aa10.61□□□□□ -0.71
MRPL55-220ENST00000411464 SPACA4Q8TDM5 124 aa10.61□□□□□ -0.71
MRPL55-220ENST00000411464 GNG13Q9P2W3 67 aa10.61□□□□□ -0.71
MRPL55-220ENST00000411464 A0A1B0GUV1 79 aa10.6□□□□□ -0.71
MRPL55-220ENST00000411464 SCO2A0A1W2PP80 73 aa10.6□□□□□ -0.71
MRPL55-220ENST00000411464 M0QY20 66 aa10.6□□□□□ -0.71
MRPL55-220ENST00000411464 SLPIP03973 132 aa10.6□□□□□ -0.71
MRPL55-220ENST00000411464 MGPP08493 103 aa10.6□□□□□ -0.71
MRPL55-220ENST00000411464 LYPD6BQ8NI32 183 aa10.6□□□□□ -0.71
MRPL55-220ENST00000411464 C7orf33Q8WU49 177 aa10.6□□□□□ -0.71
MRPL55-220ENST00000411464 TMEM243Q9BU79 118 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms