RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 SMIM20Q8N5G0 67 aa-1.81□□□□□ -2.7
RNU2-55P-201ENST00000411146 BRK1Q8WUW1 75 aa-1.81□□□□□ -2.7
RNU2-55P-201ENST00000411146 LYSTQ99698 3801 aa-1.81□□□□□ -2.7
RNU2-55P-201ENST00000411146 SCP2D1Q9UJQ7 156 aa-1.81□□□□□ -2.7
RNU2-55P-201ENST00000411146 ARL2BPQ9Y2Y0 163 aa-1.81□□□□□ -2.7
RNU2-55P-201ENST00000411146 WDR7Q9Y4E6 1490 aa-1.82□□□□□ -2.7
RNU2-55P-201ENST00000411146 CLPSL1A2RUU4 121 aa-1.82□□□□□ -2.7
RNU2-55P-201ENST00000411146 APOC4-APOC2K7ER74 178 aa-1.82□□□□□ -2.7
RNU2-55P-201ENST00000411146 NPFFO15130 113 aa-1.82□□□□□ -2.7
RNU2-55P-201ENST00000411146 SLC25A5P05141 298 aaKnown RBP-1.82□□□□□ -2.7
RNU2-55P-201ENST00000411146 CFAP126Q5VTH2 177 aa-1.82□□□□□ -2.7
RNU2-55P-201ENST00000411146 PTRHD1Q6GMV3 140 aaKnown RBP-1.82□□□□□ -2.7
RNU2-55P-201ENST00000411146 VPS25Q9BRG1 176 aa-1.82□□□□□ -2.7
RNU2-55P-201ENST00000411146 NPVFQ9HCQ7 196 aa-1.82□□□□□ -2.7
RNU2-55P-201ENST00000411146 IBTKQ9P2D0 1353 aaPredicted RBP-1.83□□□□□ -2.7
RNU2-55P-201ENST00000411146 SPCS2Q15005 226 aa-1.83□□□□□ -2.7
RNU2-55P-201ENST00000411146 DHRS4L2Q6PKH6 230 aa-1.83□□□□□ -2.7
RNU2-55P-201ENST00000411146 SDF2Q99470 211 aa-1.83□□□□□ -2.7
RNU2-55P-201ENST00000411146 TAS2R8Q9NYW2 309 aa-1.83□□□□□ -2.7
RNU2-55P-201ENST00000411146 NIPBLQ6KC79 2804 aaeCLIP-1.83□□□□□ -2.7
RNU2-55P-201ENST00000411146 ZZEF1O43149 2961 aa-1.84□□□□□ -2.7
RNU2-55P-201ENST00000411146 TRBV7-6A0A0J9YX20 115 aa-1.84□□□□□ -2.7
RNU2-55P-201ENST00000411146 CTXN2P0C2S0 81 aa-1.84□□□□□ -2.7
RNU2-55P-201ENST00000411146 COX6B1P14854 86 aa-1.84□□□□□ -2.7
RNU2-55P-201ENST00000411146 GNG3P63215 75 aa-1.84□□□□□ -2.7
RNU2-55P-201ENST00000411146 OR13C6PQ8NH95 151 aa-1.84□□□□□ -2.7
RNU2-55P-201ENST00000411146 DYDC1Q8WWB3 177 aa-1.84□□□□□ -2.7
RNU2-55P-201ENST00000411146 SPRR2FQ96RM1 72 aa-1.84□□□□□ -2.7
RNU2-55P-201ENST00000411146 RYR2Q92736 4967 aa-1.84□□□□□ -2.7
RNU2-55P-201ENST00000411146 PRDM2Q13029 1718 aa-1.84□□□□□ -2.7
RNU2-55P-201ENST00000411146 KNL1Q8NG31 2342 aa-1.85□□□□□ -2.71
RNU2-55P-201ENST00000411146 TCRAP04437 139 aa-1.85□□□□□ -2.71
RNU2-55P-201ENST00000411146 PLGLB1Q02325 96 aa-1.85□□□□□ -2.71
RNU2-55P-201ENST00000411146 HSD17B12Q53GQ0 312 aa-1.85□□□□□ -2.71
RNU2-55P-201ENST00000411146 Q5VV11 94 aa-1.85□□□□□ -2.71
RNU2-55P-201ENST00000411146 NDUFA11Q86Y39 141 aa-1.85□□□□□ -2.71
RNU2-55P-201ENST00000411146 SNX29P2Q8IUI4 249 aa-1.85□□□□□ -2.71
RNU2-55P-201ENST00000411146 LXNQ9BS40 222 aa-1.85□□□□□ -2.71
RNU2-55P-201ENST00000411146 SLC35B3Q9H1N7 401 aa-1.85□□□□□ -2.71
RNU2-55P-201ENST00000411146 METTL1Q9UBP6 276 aaKnown RBP-1.85□□□□□ -2.71
RNU2-55P-201ENST00000411146 MYH13Q9UKX3 1938 aa-1.85□□□□□ -2.71
RNU2-55P-201ENST00000411146 PNMA8CA0A1B0GUJ8 204 aa-1.86□□□□□ -2.71
RNU2-55P-201ENST00000411146 J3KT08 172 aa-1.86□□□□□ -2.71
RNU2-55P-201ENST00000411146 NIPSNAP2O75323 286 aa-1.86□□□□□ -2.71
RNU2-55P-201ENST00000411146 IFNA1P01562 189 aa-1.86□□□□□ -2.71
RNU2-55P-201ENST00000411146 SRP9P49458 86 aaKnown RBP-1.86□□□□□ -2.71
RNU2-55P-201ENST00000411146 FAM24BQ8N5W8 94 aa-1.86□□□□□ -2.71
RNU2-55P-201ENST00000411146 DYNLRB2Q8TF09 96 aa-1.86□□□□□ -2.71
RNU2-55P-201ENST00000411146 AGPAT4-IT1Q9H0P7 198 aa-1.86□□□□□ -2.71
RNU2-55P-201ENST00000411146 TRAPPC2LQ9UL33 140 aa-1.86□□□□□ -2.71
RNU2-55P-201ENST00000411146 A2MP01023 1474 aa-1.87□□□□□ -2.71
RNU2-55P-201ENST00000411146 AKAP13Q12802 2813 aa-1.87□□□□□ -2.71
RNU2-55P-201ENST00000411146 UQCRQO14949 82 aa-1.87□□□□□ -2.71
RNU2-55P-201ENST00000411146 S100A6P06703 90 aa-1.87□□□□□ -2.71
RNU2-55P-201ENST00000411146 C10orf82Q8WW14 230 aa-1.87□□□□□ -2.71
RNU2-55P-201ENST00000411146 RNF213Q63HN8 5207 aa-1.87□□□□□ -2.71
RNU2-55P-201ENST00000411146 PLECQ15149 4684 aaKnown RBP-1.88□□□□□ -2.71
RNU2-55P-201ENST00000411146 TEX15Q9BXT5 2789 aa-1.88□□□□□ -2.71
RNU2-55P-201ENST00000411146 TRAV2A0A0B4J234 112 aa-1.88□□□□□ -2.71
RNU2-55P-201ENST00000411146 RPL22P35268 128 aaKnown RBP-1.88□□□□□ -2.71
RNU2-55P-201ENST00000411146 DEFB135Q30KP9 77 aa-1.88□□□□□ -2.71
RNU2-55P-201ENST00000411146 PIGYQ3MUY2 71 aa-1.88□□□□□ -2.71
RNU2-55P-201ENST00000411146 ERG28Q9UKR5 140 aa-1.88□□□□□ -2.71
RNU2-55P-201ENST00000411146 MED31Q9Y3C7 131 aa-1.88□□□□□ -2.71
RNU2-55P-201ENST00000411146 ANK3Q12955 4377 aaKnown RBP-1.88□□□□□ -2.71
RNU2-55P-201ENST00000411146 DMXL1Q9Y485 3027 aa-1.89□□□□□ -2.71
RNU2-55P-201ENST00000411146 FAM92AA1XBS5 289 aa-1.89□□□□□ -2.71
RNU2-55P-201ENST00000411146 LSM3P62310 102 aaKnown RBP-1.89□□□□□ -2.71
RNU2-55P-201ENST00000411146 MRPS15P82914 257 aaKnown RBP-1.89□□□□□ -2.71
RNU2-55P-201ENST00000411146 C9orf116Q5BN46 136 aaPredicted RBP-1.89□□□□□ -2.71
RNU2-55P-201ENST00000411146 CEP19Q96LK0 163 aa-1.89□□□□□ -2.71
RNU2-55P-201ENST00000411146 NOP16Q9Y3C1 178 aaKnown RBP-1.89□□□□□ -2.71
RNU2-55P-201ENST00000411146 UFC1Q9Y3C8 167 aa-1.89□□□□□ -2.71
RNU2-55P-201ENST00000411146 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.89□□□□□ -2.71
RNU2-55P-201ENST00000411146 KALRNO60229 2985 aa-1.89□□□□□ -2.71
RNU2-55P-201ENST00000411146 DNAH11Q96DT5 4516 aa-1.9□□□□□ -2.71
RNU2-55P-201ENST00000411146 RPL7P18124 248 aaKnown RBP-1.9□□□□□ -2.71
RNU2-55P-201ENST00000411146 UBE2D1P51668 147 aa-1.9□□□□□ -2.71
RNU2-55P-201ENST00000411146 RGS21Q2M5E4 152 aa-1.9□□□□□ -2.71
RNU2-55P-201ENST00000411146 DEFB112Q30KQ8 113 aa-1.9□□□□□ -2.71
RNU2-55P-201ENST00000411146 BAGE3Q86Y29 109 aa-1.9□□□□□ -2.71
RNU2-55P-201ENST00000411146 DEFB105AQ8NG35 78 aa-1.9□□□□□ -2.71
RNU2-55P-201ENST00000411146 LAMTOR2Q9Y2Q5 125 aa-1.9□□□□□ -2.71
RNU2-55P-201ENST00000411146 APOBP04114 4563 aaKnown RBP-1.91□□□□□ -2.71
RNU2-55P-201ENST00000411146 LRRC37A2A6NM11 1700 aa-1.91□□□□□ -2.71
RNU2-55P-201ENST00000411146 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.91□□□□□ -2.71
RNU2-55P-201ENST00000411146 PGRMC1O00264 195 aaKnown RBP-1.91□□□□□ -2.72
RNU2-55P-201ENST00000411146 SPINK4O60575 86 aa-1.91□□□□□ -2.72
RNU2-55P-201ENST00000411146 HSD11B1P28845 292 aa-1.91□□□□□ -2.72
RNU2-55P-201ENST00000411146 TMEM91Q6ZNR0 172 aa-1.91□□□□□ -2.72
RNU2-55P-201ENST00000411146 DNAJC15Q9Y5T4 150 aa-1.91□□□□□ -2.72
RNU2-55P-201ENST00000411146 MED23Q9ULK4 1368 aa-1.92□□□□□ -2.72
RNU2-55P-201ENST00000411146 HIST1H1BP16401 226 aaKnown RBP-1.92□□□□□ -2.72
RNU2-55P-201ENST00000411146 POLR2HP52434 150 aaKnown RBP-1.92□□□□□ -2.72
RNU2-55P-201ENST00000411146 STX12Q86Y82 276 aa-1.92□□□□□ -2.72
RNU2-55P-201ENST00000411146 ATP6V0E2Q8NHE4 81 aa-1.92□□□□□ -2.72
RNU2-55P-201ENST00000411146 CFAP53Q96M91 514 aa-1.92□□□□□ -2.72
RNU2-55P-201ENST00000411146 NDUFA12Q9UI09 145 aa-1.92□□□□□ -2.72
RNU2-55P-201ENST00000411146 SBF2Q86WG5 1849 aa-1.92□□□□□ -2.72
RNU2-55P-201ENST00000411146 REV3LO60673 3130 aa-1.93□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms