RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SPINK6Q6UWN8 80 aa10.42□□□□□ -0.74
CHMP3-203ENST00000409225 TRBV25-1A0A075B6N4 114 aa10.41□□□□□ -0.74
CHMP3-203ENST00000409225 CXorf1O96002 111 aa10.41□□□□□ -0.74
CHMP3-203ENST00000409225 MZT2BQ6NZ67 158 aa10.41□□□□□ -0.74
CHMP3-203ENST00000409225 STPG4Q8N801 248 aa10.41□□□□□ -0.74
CHMP3-203ENST00000409225 TRBV6-1A0A0K0K1D8 114 aa10.4□□□□□ -0.74
CHMP3-203ENST00000409225 A0A1W2PRE2 83 aa10.4□□□□□ -0.74
CHMP3-203ENST00000409225 PEX7O00628 323 aa10.4□□□□□ -0.74
CHMP3-203ENST00000409225 TRAV8-4A0A0B4J246 113 aa10.39□□□□□ -0.75
CHMP3-203ENST00000409225 F5H697 171 aa10.39□□□□□ -0.75
CHMP3-203ENST00000409225 P01737 135 aa10.39□□□□□ -0.75
CHMP3-203ENST00000409225 UBE2G2P60604 165 aa10.39□□□□□ -0.75
CHMP3-203ENST00000409225 PRSS3P2Q8NHM4 247 aa10.39□□□□□ -0.75
CHMP3-203ENST00000409225 CCDC32Q9BV29 185 aa10.39□□□□□ -0.75
CHMP3-203ENST00000409225 VAX2Q9UIW0 290 aa10.39□□□□□ -0.75
CHMP3-203ENST00000409225 NDUFS6O75380 124 aaKnown RBP10.38□□□□□ -0.75
CHMP3-203ENST00000409225 C20orf203Q8NBC4 194 aa10.38□□□□□ -0.75
CHMP3-203ENST00000409225 IGHV1-24A0A0C4DH33 117 aa10.37□□□□□ -0.75
CHMP3-203ENST00000409225 IQCJQ1A5X6 159 aa10.37□□□□□ -0.75
CHMP3-203ENST00000409225 ZNF674Q2M3X9 581 aa10.37□□□□□ -0.75
CHMP3-203ENST00000409225 COX8CQ7Z4L0 72 aa10.37□□□□□ -0.75
CHMP3-203ENST00000409225 OR10AG1Q8NH19 301 aa10.37□□□□□ -0.75
CHMP3-203ENST00000409225 ENKURQ8TC29 256 aa10.37□□□□□ -0.75
CHMP3-203ENST00000409225 ACTR3CQ9C0K3 210 aaPredicted RBP10.37□□□□□ -0.75
CHMP3-203ENST00000409225 GFRA4Q9GZZ7 299 aa10.37□□□□□ -0.75
CHMP3-203ENST00000409225 ZFP30Q9Y2G7 519 aa10.37□□□□□ -0.75
CHMP3-203ENST00000409225 MUC2Q02817 5179 aa10.36□□□□□ -0.75
CHMP3-203ENST00000409225 IGLV4-60A0A075B6I1 120 aa10.36□□□□□ -0.75
CHMP3-203ENST00000409225 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
CHMP3-203ENST00000409225 MBP02144 154 aa10.36□□□□□ -0.75
CHMP3-203ENST00000409225 GZMBP10144 247 aa10.36□□□□□ -0.75
CHMP3-203ENST00000409225 ATP6V0CP27449 155 aa10.36□□□□□ -0.75
CHMP3-203ENST00000409225 RPS10P46783 165 aaKnown RBP10.36□□□□□ -0.75
CHMP3-203ENST00000409225 DEFA3P59666 94 aa10.36□□□□□ -0.75
CHMP3-203ENST00000409225 C15orf56Q8N910 161 aa10.36□□□□□ -0.75
CHMP3-203ENST00000409225 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
CHMP3-203ENST00000409225 HIGD2BQ4VC39 106 aa10.35□□□□□ -0.75
CHMP3-203ENST00000409225 HIST1H2BAQ96A08 127 aa10.35□□□□□ -0.75
CHMP3-203ENST00000409225 PSMG3Q9BT73 122 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-203ENST00000409225 ZNF471Q9BX82 626 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-203ENST00000409225 A6NHS1 94 aa10.34□□□□□ -0.75
CHMP3-203ENST00000409225 SSNA1O43805 119 aa10.34□□□□□ -0.75
CHMP3-203ENST00000409225 SSTP61278 116 aa10.34□□□□□ -0.75
CHMP3-203ENST00000409225 UBE2G1P62253 170 aa10.34□□□□□ -0.75
CHMP3-203ENST00000409225 A0A096LNI7 61 aa10.33□□□□□ -0.76
CHMP3-203ENST00000409225 GAGE12HA6NDE8 117 aa10.33□□□□□ -0.76
CHMP3-203ENST00000409225 CFAP161Q6P656 301 aa10.33□□□□□ -0.76
CHMP3-203ENST00000409225 FMC1Q96HJ9 113 aa10.33□□□□□ -0.76
CHMP3-203ENST00000409225 FAM74A7A6NL05 159 aa10.32□□□□□ -0.76
CHMP3-203ENST00000409225 INMT-MINDY4F8WBC2 141 aa10.32□□□□□ -0.76
CHMP3-203ENST00000409225 SERF2P84101 59 aa10.32□□□□□ -0.76
CHMP3-203ENST00000409225 SPANXN1Q5VSR9 72 aa10.32□□□□□ -0.76
CHMP3-203ENST00000409225 AQP10Q96PS8 301 aa10.32□□□□□ -0.76
CHMP3-203ENST00000409225 A0A1B0GUV1 79 aa10.31□□□□□ -0.76
CHMP3-203ENST00000409225 H7C1H1 209 aa10.31□□□□□ -0.76
CHMP3-203ENST00000409225 SMIM17P0DL12 118 aa10.31□□□□□ -0.76
CHMP3-203ENST00000409225 SULT1A2P50226 295 aa10.31□□□□□ -0.76
CHMP3-203ENST00000409225 Q6ZRP5 223 aa10.31□□□□□ -0.76
CHMP3-203ENST00000409225 INO80EQ8NBZ0 244 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-203ENST00000409225 TMEM243Q9BU79 118 aa10.31□□□□□ -0.76
CHMP3-203ENST00000409225 TNFSF18Q9UNG2 199 aa10.31□□□□□ -0.76
CHMP3-203ENST00000409225 FAT4Q6V0I7 4981 aa10.31□□□□□ -0.76
CHMP3-203ENST00000409225 IGKV3OR2-268A0A0C4DH90 116 aa10.3□□□□□ -0.76
CHMP3-203ENST00000409225 LTAP01374 205 aa10.3□□□□□ -0.76
CHMP3-203ENST00000409225 ZNF726P1Q15940 193 aa10.3□□□□□ -0.76
CHMP3-203ENST00000409225 NKX6-2Q9C056 277 aaPredicted RBP10.3□□□□□ -0.76
CHMP3-203ENST00000409225 SNAI2O43623 268 aa10.29□□□□□ -0.76
CHMP3-203ENST00000409225 CTXND1A0A1B0GTU2 59 aa10.28□□□□□ -0.76
CHMP3-203ENST00000409225 FAM231BA6NCW3 169 aa10.28□□□□□ -0.76
CHMP3-203ENST00000409225 MGPP08493 103 aa10.28□□□□□ -0.76
CHMP3-203ENST00000409225 KRTAP9-6A0A140TA67 174 aa10.27□□□□□ -0.77
CHMP3-203ENST00000409225 UBE2L6O14933 153 aa10.27□□□□□ -0.77
CHMP3-203ENST00000409225 CXCL1P09341 107 aa10.27□□□□□ -0.77
CHMP3-203ENST00000409225 AP1S3Q96PC3 154 aa10.27□□□□□ -0.77
CHMP3-203ENST00000409225 SSBP4Q9BWG4 385 aaPredicted RBP10.27□□□□□ -0.77
CHMP3-203ENST00000409225 LINC00474Q9P2X8 69 aa10.27□□□□□ -0.77
CHMP3-203ENST00000409225 M0QY20 66 aa10.26□□□□□ -0.77
CHMP3-203ENST00000409225 OR5AL1P0C617 328 aa10.26□□□□□ -0.77
CHMP3-203ENST00000409225 AKR1C3P42330 323 aa10.26□□□□□ -0.77
CHMP3-203ENST00000409225 NKX2-5P52952 324 aaPredicted RBP10.26□□□□□ -0.77
CHMP3-203ENST00000409225 GVQW2A0A096LPI5 108 aaPredicted RBP10.25□□□□□ -0.77
CHMP3-203ENST00000409225 A0A0U1RQV1 116 aa10.24□□□□□ -0.77
CHMP3-203ENST00000409225 CST9LP1Q5W188 147 aa10.24□□□□□ -0.77
CHMP3-203ENST00000409225 SUMO4Q6EEV6 95 aa10.24□□□□□ -0.77
CHMP3-203ENST00000409225 STOML3Q8TAV4 291 aa10.24□□□□□ -0.77
CHMP3-203ENST00000409225 CHCHD10Q8WYQ3 142 aaPredicted RBP10.24□□□□□ -0.77
CHMP3-203ENST00000409225 MARVELD1Q9BSK0 173 aa10.24□□□□□ -0.77
CHMP3-203ENST00000409225 UPK1BO75841 260 aa10.22□□□□□ -0.77
CHMP3-203ENST00000409225 AMTP48728 403 aa10.22□□□□□ -0.77
CHMP3-203ENST00000409225 ZNF664Q8N3J9 261 aa10.22□□□□□ -0.77
CHMP3-203ENST00000409225 PKIGQ9Y2B9 76 aa10.22□□□□□ -0.77
CHMP3-203ENST00000409225 TRAV26-2A0A0B4J265 109 aa10.21□□□□□ -0.77
CHMP3-203ENST00000409225 RPL7L1Q6DKI1 246 aaKnown RBP10.21□□□□□ -0.77
CHMP3-203ENST00000409225 LINC00526Q96FQ7 95 aa10.21□□□□□ -0.77
CHMP3-203ENST00000409225 PGLYRP4Q96LB8 373 aa10.21□□□□□ -0.77
CHMP3-203ENST00000409225 TCEAL7Q9BRU2 100 aa10.21□□□□□ -0.77
CHMP3-203ENST00000409225 PSORS1C2Q9UIG4 136 aa10.21□□□□□ -0.77
CHMP3-203ENST00000409225 MAP1LC3B2A6NCE7 125 aa10.2□□□□□ -0.78
CHMP3-203ENST00000409225 CACNG7P62955 275 aa10.2□□□□□ -0.78
CHMP3-203ENST00000409225 IFITM3Q01628 133 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms