RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 NPBQ8NG41 125 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 MBD3L2Q8NHZ7 208 aaPredicted RBP9.53□□□□□ -0.88
HERC3-203ENST00000407637 C20orf173Q96LM9 149 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 SVEP1Q4LDE5 3571 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 ZDBF2Q9HCK1 2354 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 PCNX1Q96RV3 2341 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 IGHV1-69P01742 117 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 MIAQ16674 131 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 C16orf92Q96LL3 132 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 SPANXCQ9NY87 97 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 RS1O15537 224 aa9.52□□□□□ -0.88
HERC3-203ENST00000407637 HIST1H4AP62805 103 aaKnown RBP9.52□□□□□ -0.88
HERC3-203ENST00000407637 SDIM1Q6ZPB5 146 aa9.52□□□□□ -0.88
HERC3-203ENST00000407637 RNASE4P34096 147 aaKnown RBP9.52□□□□□ -0.89
HERC3-203ENST00000407637 TMEM258P61165 79 aa9.52□□□□□ -0.89
HERC3-203ENST00000407637 C15orf32Q32M92 178 aa9.52□□□□□ -0.89
HERC3-203ENST00000407637 DAZ2Q13117 558 aaKnown RBP9.52□□□□□ -0.89
HERC3-203ENST00000407637 Q5XG85 94 aa9.52□□□□□ -0.89
HERC3-203ENST00000407637 VMO1Q7Z5L0 202 aa9.52□□□□□ -0.89
HERC3-203ENST00000407637 DAZ4Q86SG3 579 aaKnown RBP9.52□□□□□ -0.89
HERC3-203ENST00000407637 RNF152Q8N8N0 203 aa9.52□□□□□ -0.89
HERC3-203ENST00000407637 DAZ1Q9NQZ3 744 aaKnown RBP9.52□□□□□ -0.89
HERC3-203ENST00000407637 DAZ3Q9NR90 486 aaKnown RBP9.52□□□□□ -0.89
HERC3-203ENST00000407637 TRAV13-1A0A0B4J241 112 aa9.51□□□□□ -0.89
HERC3-203ENST00000407637 DAND5Q8N907 189 aa9.51□□□□□ -0.89
HERC3-203ENST00000407637 FDCSPQ8NFU4 85 aa9.51□□□□□ -0.89
HERC3-203ENST00000407637 MED13LQ71F56 2210 aa9.51□□□□□ -0.89
HERC3-203ENST00000407637 CUL9Q8IWT3 2517 aa9.51□□□□□ -0.89
HERC3-203ENST00000407637 TRBV27A0A0K0K1C4 114 aa9.51□□□□□ -0.89
HERC3-203ENST00000407637 A8MZ25 164 aa9.51□□□□□ -0.89
HERC3-203ENST00000407637 PEMTQ9UBM1 199 aa9.51□□□□□ -0.89
HERC3-203ENST00000407637 NDUFA12Q9UI09 145 aa9.51□□□□□ -0.89
HERC3-203ENST00000407637 M0R1W7 72 aa9.5□□□□□ -0.89
HERC3-203ENST00000407637 MED14OSP0DP75 135 aa9.5□□□□□ -0.89
HERC3-203ENST00000407637 FAM19A4Q96LR4 140 aa9.5□□□□□ -0.89
HERC3-203ENST00000407637 LAMA5O15230 3695 aa9.5□□□□□ -0.89
HERC3-203ENST00000407637 KLRB1Q12918 225 aa9.5□□□□□ -0.89
HERC3-203ENST00000407637 LPAL2Q16609 132 aa9.5□□□□□ -0.89
HERC3-203ENST00000407637 RELNP78509 3460 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 FAM74A4Q5TZK3 123 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 CLEC19AQ6UXS0 136 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 FAM215AQ9Y5M1 114 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 SPTBN2O15020 2390 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 IGLV4-3A0A075B6K6 122 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 LYNX1G3V0Z9 82 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 NXPH4O95158 308 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 LYNX1P0DP58 116 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 TIRAPP58753 221 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 BSPH1Q075Z2 132 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 DYNLRB1Q9NP97 96 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 DPM3Q9P2X0 92 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 LENEPQ9Y5L5 61 aa9.49□□□□□ -0.89
HERC3-203ENST00000407637 RPL18AQ02543 176 aaKnown RBP9.48□□□□□ -0.89
HERC3-203ENST00000407637 ITLN2Q8WWU7 325 aaPredicted RBP9.48□□□□□ -0.89
HERC3-203ENST00000407637 NCOR1O75376 2440 aa9.48□□□□□ -0.89
HERC3-203ENST00000407637 CITED2Q99967 270 aaPredicted RBP9.48□□□□□ -0.89
HERC3-203ENST00000407637 ECSCRQ19T08 205 aa9.47□□□□□ -0.89
HERC3-203ENST00000407637 CCDC140Q96MF4 163 aa9.47□□□□□ -0.89
HERC3-203ENST00000407637 UPK3BQ9BT76 320 aa9.47□□□□□ -0.89
HERC3-203ENST00000407637 GPR179Q6PRD1 2367 aa9.47□□□□□ -0.89
HERC3-203ENST00000407637 TECTAO75443 2155 aa9.47□□□□□ -0.89
HERC3-203ENST00000407637 F6UB75 175 aa9.47□□□□□ -0.89
HERC3-203ENST00000407637 RNASE6Q93091 150 aaKnown RBP9.47□□□□□ -0.89
HERC3-203ENST00000407637 LINC00477Q96M19 166 aa9.47□□□□□ -0.89
HERC3-203ENST00000407637 COX7A2LO14548 114 aa9.46□□□□□ -0.89
HERC3-203ENST00000407637 RPL11P62913 178 aaKnown RBP9.46□□□□□ -0.89
HERC3-203ENST00000407637 C9orf139Q6ZV77 190 aa9.46□□□□□ -0.89
HERC3-203ENST00000407637 C20orf203Q8NBC4 194 aa9.46□□□□□ -0.89
HERC3-203ENST00000407637 C22orf24Q9Y442 160 aa9.46□□□□□ -0.89
HERC3-203ENST00000407637 CACNA1HO95180 2353 aa9.46□□□□□ -0.9
HERC3-203ENST00000407637 IGHV7-81A0A0B4J1V7 117 aa9.46□□□□□ -0.9
HERC3-203ENST00000407637 IGHV1-58A0A0C4DH39 117 aa9.46□□□□□ -0.9
HERC3-203ENST00000407637 RNASE13Q5GAN3 156 aaKnown RBP9.46□□□□□ -0.9
HERC3-203ENST00000407637 IGHV3OR16-10A0A075B7F0 116 aa9.45□□□□□ -0.9
HERC3-203ENST00000407637 TRBV6-5A0A0K0K1A5 114 aa9.45□□□□□ -0.9
HERC3-203ENST00000407637 BAALC-AS2P0C853 105 aa9.45□□□□□ -0.9
HERC3-203ENST00000407637 SERP2Q8N6R1 65 aa9.45□□□□□ -0.9
HERC3-203ENST00000407637 PYGO1Q9Y3Y4 419 aa9.45□□□□□ -0.9
HERC3-203ENST00000407637 A0A087WVE0 104 aa9.44□□□□□ -0.9
HERC3-203ENST00000407637 IGKV3D-7A0A0C4DH55 119 aa9.44□□□□□ -0.9
HERC3-203ENST00000407637 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
HERC3-203ENST00000407637 PRO3102Q9H379 93 aa9.44□□□□□ -0.9
HERC3-203ENST00000407637 DCHS2Q6V1P9 2916 aa9.44□□□□□ -0.9
HERC3-203ENST00000407637 CD28P10747 220 aa9.44□□□□□ -0.9
HERC3-203ENST00000407637 BEAN1Q3B7T3 259 aa9.43□□□□□ -0.9
HERC3-203ENST00000407637 DMXL1Q9Y485 3027 aa9.43□□□□□ -0.9
HERC3-203ENST00000407637 Q8N2B8 174 aa9.43□□□□□ -0.9
HERC3-203ENST00000407637 C10orf105Q8TEF2 133 aa9.43□□□□□ -0.9
HERC3-203ENST00000407637 VSIG2Q96IQ7 327 aa9.43□□□□□ -0.9
HERC3-203ENST00000407637 MRPS36P82909 103 aaKnown RBP9.42□□□□□ -0.9
HERC3-203ENST00000407637 M0QY20 66 aa9.42□□□□□ -0.9
HERC3-203ENST00000407637 FAM110DQ8TAY7 271 aaPredicted RBP9.42□□□□□ -0.9
HERC3-203ENST00000407637 U3KQE9 123 aa9.42□□□□□ -0.9
HERC3-203ENST00000407637 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
HERC3-203ENST00000407637 FAM104AQ969W3 186 aa9.41□□□□□ -0.9
HERC3-203ENST00000407637 PTPRQQ9UMZ3 2332 aa9.41□□□□□ -0.9
HERC3-203ENST00000407637 FAM218AQ96MZ4 157 aa9.41□□□□□ -0.9
HERC3-203ENST00000407637 PIEZO2Q9H5I5 2752 aa9.4□□□□□ -0.9
HERC3-203ENST00000407637 IGKV3-7A0A075B6H7 116 aa9.4□□□□□ -0.9
HERC3-203ENST00000407637 UCNP55089 124 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms