RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 TIMM17AQ99595 171 aa12.21□□□□□ -0.46
COL23A1-202ENST00000407622 TEX48A0A1B0GUV7 120 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 PRM2P04554 102 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 KRTAP1-3Q8IUG1 177 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 MTURNQ8N3F0 131 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 SYT8Q8NBV8 401 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 KNCNA6PVL3 124 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 HOXA3O43365 443 aaPredicted RBP12.2□□□□□ -0.46
COL23A1-202ENST00000407622 P0DMU3 169 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 FAM231AP0DMU4 169 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 FAM231CP0DMU5 169 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 SLURP1P55000 103 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 RPL24P83731 157 aaKnown RBP12.2□□□□□ -0.46
COL23A1-202ENST00000407622 ZNF876PQ49A33 203 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 HIST2H2BDQ6DRA6 164 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 TMEM141Q96I45 108 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 TLN2Q9Y4G6 2542 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 AKAP9Q99996 3911 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 HTN1P15515 57 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 WFDC2Q14508 124 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 Q6YL49 198 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 J3QLI3 93 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 FSHBP01225 129 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 ELANEP08246 267 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 TCTEX1D4Q5JR98 221 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 TMEM170BQ5T4T1 132 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 Q96MF0 132 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 UBE2E2Q96LR5 201 aa12.18□□□□□ -0.46
COL23A1-202ENST00000407622 NBPF19A0A087WUL8 3843 aa12.18□□□□□ -0.46
COL23A1-202ENST00000407622 GCN1Q92616 2671 aaKnown RBP12.18□□□□□ -0.46
COL23A1-202ENST00000407622 IGHV4-31P0DP07 118 aa12.17□□□□□ -0.46
COL23A1-202ENST00000407622 DUX3Q96PT4 197 aa12.17□□□□□ -0.46
COL23A1-202ENST00000407622 IGHV3-73A0A0B4J1V6 119 aa12.17□□□□□ -0.46
COL23A1-202ENST00000407622 SRSF9Q13242 221 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL23A1-202ENST00000407622 A0A0J9YY99 117 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 PROK1P58294 105 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 NSUN5P1Q3KNT7 163 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 TRPT1Q86TN4 253 aaKnown RBP12.16□□□□□ -0.46
COL23A1-202ENST00000407622 PGPEP1Q9NXJ5 209 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 CUBNO60494 3623 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 HERVK_113P61574 105 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 PAPPA-AS1Q5QFB9 102 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 RBMY1BA6NDE4 496 aaKnown RBP12.15□□□□□ -0.46
COL23A1-202ENST00000407622 RBMY1EA6NEQ0 496 aaKnown RBP12.15□□□□□ -0.46
COL23A1-202ENST00000407622 LINC01549A6NIU2 74 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 RBMY1DP0C7P1 496 aaKnown RBP12.15□□□□□ -0.46
COL23A1-202ENST00000407622 DEFB131AP59861 70 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 SFTA2Q6UW10 78 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 AMELXQ99217 191 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 NACAE9PAV3 2078 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 UBE2D1P51668 147 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 SH2D6Q7Z4S9 175 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 SPANXB1Q9NS25 103 aaPredicted RBP12.14□□□□□ -0.47
COL23A1-202ENST00000407622 RHOHQ15669 191 aa12.14□□□□□ -0.47
COL23A1-202ENST00000407622 RNF152Q8N8N0 203 aa12.14□□□□□ -0.47
COL23A1-202ENST00000407622 C20orf203Q8NBC4 194 aa12.14□□□□□ -0.47
COL23A1-202ENST00000407622 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
COL23A1-202ENST00000407622 Q9UF83 564 aa12.14□□□□□ -0.47
COL23A1-202ENST00000407622 PRO0461Q9UI25 63 aa12.14□□□□□ -0.47
COL23A1-202ENST00000407622 TRGV11A0A075B6L2 103 aa12.13□□□□□ -0.47
COL23A1-202ENST00000407622 PDZD2O15018 2839 aa12.13□□□□□ -0.47
COL23A1-202ENST00000407622 TMEM238C9JI98 176 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 F8W1H4 67 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 APOMO95445 188 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 WFDC11Q8NEX6 87 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 IGHV3-64A0A075B6Q5 118 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 I3L3M4 83 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 TSPAN13O95857 204 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 ETDBQ3ZM63 59 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 SONP18583 2426 aaKnown RBP12.12□□□□□ -0.47
COL23A1-202ENST00000407622 J3QQQ9 107 aa12.11□□□□□ -0.47
COL23A1-202ENST00000407622 NFE4Q86UQ8 179 aa12.11□□□□□ -0.47
COL23A1-202ENST00000407622 TMEM61Q8N0U2 210 aa12.11□□□□□ -0.47
COL23A1-202ENST00000407622 PRRC2AP48634 2157 aaKnown RBP12.11□□□□□ -0.47
COL23A1-202ENST00000407622 H3BMM0 161 aa12.11□□□□□ -0.47
COL23A1-202ENST00000407622 UNC79Q9P2D8 2635 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 IGLV4-3A0A075B6K6 122 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 A0A0J9YXV3 536 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 TMEM238LA0A1B0GVL6 79 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 A6NJY4 79 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 IGHV3-30P01768 117 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 IGHV3-30-5P0DP03 117 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 GAGE13Q4V321 117 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 FAM104AQ969W3 186 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 NF1P21359 2839 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 TMEM223A0PJW6 202 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
COL23A1-202ENST00000407622 CEMP1Q6PRD7 247 aaPredicted RBP12.09□□□□□ -0.47
COL23A1-202ENST00000407622 Q6ZSN1 163 aa12.09□□□□□ -0.47
COL23A1-202ENST00000407622 SLC25A29Q8N8R3 303 aa12.09□□□□□ -0.47
COL23A1-202ENST00000407622 SPAG8Q99932 426 aaPredicted RBP12.09□□□□□ -0.47
COL23A1-202ENST00000407622 NDUFA11Q86Y39 141 aa12.09□□□□□ -0.47
COL23A1-202ENST00000407622 ITPR2Q14571 2701 aa12.09□□□□□ -0.47
COL23A1-202ENST00000407622 LGALS3P17931 250 aaKnown RBP12.08□□□□□ -0.48
COL23A1-202ENST00000407622 KHDC1LQ5JSQ8 128 aa12.08□□□□□ -0.48
COL23A1-202ENST00000407622 WNK1Q9H4A3 2382 aa12.08□□□□□ -0.48
COL23A1-202ENST00000407622 A8MTW9 85 aa12.08□□□□□ -0.48
COL23A1-202ENST00000407622 CFC1BP0CG36 223 aa12.08□□□□□ -0.48
COL23A1-202ENST00000407622 CFC1P0CG37 223 aa12.08□□□□□ -0.48
COL23A1-202ENST00000407622 INSL3P51460 131 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms